DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4424 and si:dkey-237m9.1

DIOPT Version :9

Sequence 1:NP_650859.3 Gene:CG4424 / 42390 FlyBaseID:FBgn0038765 Length:345 Species:Drosophila melanogaster
Sequence 2:XP_017211095.1 Gene:si:dkey-237m9.1 / 100329377 ZFINID:ZDB-GENE-131118-30 Length:359 Species:Danio rerio


Alignment Length:132 Identity:60/132 - (45%)
Similarity:76/132 - (57%) Gaps:0/132 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly   187 HVCAICGNGYPRKSTLDTHMRRHNDERPYECEICHKSFHVNYQLKRHIRQHTGAKPYTCQYCQRN 251
            :.|..||..:.....|..|||.|.:||||.|..|.|||..|..|:.|:|.|||.|.:||..|.::
Zfish   161 YTCQQCGKSFYHAGNLIMHMRIHTEERPYSCPQCGKSFKQNGNLEVHMRTHTGEKRFTCTQCGKS 225

  Fly   252 FADRTSLVKHERTHRNERPYACKTCGKKFTYASVLKMHYKTHTGEKPHICQLCNKSFARIHNLVA 316
            |..:.:|..|.|.|..|:||.|..|||.|||.|.||.|.:|||||.|..|..|.|||:...:|:.
Zfish   226 FVKKQNLDIHMRIHTGEKPYTCTECGKSFTYKSSLKHHMRTHTGENPFGCAQCEKSFSTKSSLMN 290

  Fly   317 HL 318
            |:
Zfish   291 HM 292

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4424NP_650859.3 zf-AD 10..92 CDD:285071
C2H2 Zn finger 189..209 CDD:275368 7/19 (37%)
DUF45 <204..281 CDD:302795 36/76 (47%)
COG5048 210..>345 CDD:227381 52/109 (48%)
C2H2 Zn finger 217..237 CDD:275368 9/19 (47%)
C2H2 Zn finger 245..265 CDD:275368 6/19 (32%)
zf-H2C2_2 257..282 CDD:290200 12/24 (50%)
C2H2 Zn finger 273..293 CDD:275368 11/19 (58%)
zf-H2C2_2 286..310 CDD:290200 14/23 (61%)
C2H2 Zn finger 301..320 CDD:275368 7/18 (39%)
si:dkey-237m9.1XP_017211095.1 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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