DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4424 and znf1147

DIOPT Version :9

Sequence 1:NP_650859.3 Gene:CG4424 / 42390 FlyBaseID:FBgn0038765 Length:345 Species:Drosophila melanogaster
Sequence 2:NP_001108581.1 Gene:znf1147 / 100141494 ZFINID:ZDB-GENE-080218-13 Length:260 Species:Danio rerio


Alignment Length:227 Identity:79/227 - (34%)
Similarity:112/227 - (49%) Gaps:26/227 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   103 VKEVVQQTRPSTPPPIETEQLEPPEDE-VLEEGV---------WSTEDPIEETPHGPAEKERPTV 157
            :||..:..:......::.|.|:...|. ||:|..         |..|.|.|.|     ..|:|| 
Zfish     4 IKEESEDVKIEETFTVKQEDLQEQSDRMVLKEETHGQNEIDEKWQFEKPQEIT-----TDEKPT- 62

  Fly   158 LTVEMLPAPYPPPASTPPPAPAGAVKGKLHVCAICGNGYPRKSTLDTHMRRHNDERPYECEICHK 222
            ||.:.|....|..:.:          |....|.:|...:.:||.||.|||.|..|:||.||.|.:
Zfish    63 LTKKTLSHGRPRKSKS----------GCNFSCKLCSKSFSQKSNLDVHMRVHTGEKPYTCEQCGQ 117

  Fly   223 SFHVNYQLKRHIRQHTGAKPYTCQYCQRNFADRTSLVKHERTHRNERPYACKTCGKKFTYASVLK 287
            ||.....||.|:|.|||.||::|:.|.::|:.:.:|..|.|.|..|:||.|:.|||.|:.....|
Zfish   118 SFSQKQCLKTHMRIHTGEKPFSCKQCGKSFSQKPNLDIHMRVHTGEKPYTCEQCGKSFSQKQSFK 182

  Fly   288 MHYKTHTGEKPHICQLCNKSFARIHNLVAHLQ 319
            .|.:.||||:|:.||.|.|||....||..|::
Zfish   183 SHMRIHTGERPYTCQQCGKSFRHARNLEVHMR 214

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4424NP_650859.3 zf-AD 10..92 CDD:285071
C2H2 Zn finger 189..209 CDD:275368 9/19 (47%)
DUF45 <204..281 CDD:302795 35/76 (46%)
COG5048 210..>345 CDD:227381 48/110 (44%)
C2H2 Zn finger 217..237 CDD:275368 9/19 (47%)
C2H2 Zn finger 245..265 CDD:275368 6/19 (32%)
zf-H2C2_2 257..282 CDD:290200 12/24 (50%)
C2H2 Zn finger 273..293 CDD:275368 7/19 (37%)
zf-H2C2_2 286..310 CDD:290200 13/23 (57%)
C2H2 Zn finger 301..320 CDD:275368 9/19 (47%)
znf1147NP_001108581.1 zf-C2H2 82..104 CDD:278523 9/21 (43%)
C2H2 Zn finger 84..104 CDD:275368 9/19 (47%)
COG5048 <86..257 CDD:227381 57/129 (44%)
zf-H2C2_2 96..121 CDD:290200 14/24 (58%)
C2H2 Zn finger 112..132 CDD:275368 9/19 (47%)
zf-H2C2_2 125..149 CDD:290200 12/23 (52%)
C2H2 Zn finger 140..160 CDD:275368 6/19 (32%)
zf-H2C2_2 152..177 CDD:290200 12/24 (50%)
C2H2 Zn finger 168..188 CDD:275368 7/19 (37%)
zf-H2C2_2 180..205 CDD:290200 13/24 (54%)
C2H2 Zn finger 196..216 CDD:275368 9/19 (47%)
zf-H2C2_2 208..230 CDD:290200 3/7 (43%)
C2H2 Zn finger 224..244 CDD:275368
zf-H2C2_2 236..259 CDD:290200
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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