DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4424 and LOC100007471

DIOPT Version :10

Sequence 1:NP_650859.3 Gene:CG4424 / 42390 FlyBaseID:FBgn0038765 Length:345 Species:Drosophila melanogaster
Sequence 2:XP_021326585.1 Gene:LOC100007471 / 100007471 -ID:- Length:276 Species:Danio rerio


Alignment Length:236 Identity:81/236 - (34%)
Similarity:108/236 - (45%) Gaps:31/236 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   103 VKEVVQQTRPSTPPPIETEQLEPPEDEVLEEGVWSTEDPIEETPHGPAEKERPTVLTVEMLPAPY 167
            ||...|||. .|....|.|.|    :|:.||........:|:    |.||.|   .|.......:
Zfish    19 VKHAEQQTE-LTSLNDECEDL----NEIKEEDQDGQNSGVEK----PPEKAR---FTCSQCGKTF 71

  Fly   168 PPPASTPPPAPAGAVKGKLHV--------CAICGNGYPRKSTLDTHMRRHNDERPYECEICHKSF 224
                     ...|.:|..|.:        |..||..:.:...|..|:|.|:.|:||.|..|.|||
Zfish    72 ---------LHHGKLKDHLRIHTGEKPFTCPQCGKSFNKNGNLKVHLRIHSGEKPYPCPQCGKSF 127

  Fly   225 HVNYQLKRHIRQHTGAKPYTCQYCQRNFADRTSLVKHERTHRNERPYACKTCGKKFTYASVLKMH 289
            ::..:||.|:|.|||..|:||..|.::|..|.:.|.|.|.|..|:||.|:.|||.|.....||:|
Zfish   128 YLRIKLKVHMRVHTGESPFTCPQCGKSFKQRGNFVNHIRIHTGEKPYICQQCGKSFHQDGGLKVH 192

  Fly   290 YKTHTGEKPHICQLCNKSFARIHNLVAHLQTQQHINDPRLT 330
            .:.||||||..||.|.|||....||..|::.  |..:...|
Zfish   193 MRVHTGEKPFTCQQCGKSFNLQGNLKVHMRV--HTGESPFT 231

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4424NP_650859.3 zf-AD 10..92 CDD:462262
C2H2 Zn finger 189..209 CDD:275368 6/19 (32%)
COG5048 210..>345 CDD:227381 53/121 (44%)
C2H2 Zn finger 217..237 CDD:275368 9/19 (47%)
C2H2 Zn finger 245..265 CDD:275368 7/19 (37%)
C2H2 Zn finger 273..293 CDD:275368 8/19 (42%)
C2H2 Zn finger 301..320 CDD:275368 9/18 (50%)
LOC100007471XP_021326585.1 C2H2 Zn finger 64..84 CDD:275368 3/28 (11%)
COG5048 <88..248 CDD:227381 60/146 (41%)
C2H2 Zn finger 92..112 CDD:275368 6/19 (32%)
C2H2 Zn finger 120..140 CDD:275368 9/19 (47%)
C2H2 Zn finger 148..168 CDD:275368 7/19 (37%)
C2H2 Zn finger 176..196 CDD:275368 8/19 (42%)
C2H2 Zn finger 204..224 CDD:275368 9/21 (43%)
C2H2 Zn finger 232..252 CDD:275368 81/236 (34%)
Blue background indicates that the domain is not in the aligned region.

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