DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4424 and zgc:162936

DIOPT Version :9

Sequence 1:NP_650859.3 Gene:CG4424 / 42390 FlyBaseID:FBgn0038765 Length:345 Species:Drosophila melanogaster
Sequence 2:NP_001353568.1 Gene:zgc:162936 / 100005727 ZFINID:ZDB-GENE-030131-5253 Length:602 Species:Danio rerio


Alignment Length:210 Identity:66/210 - (31%)
Similarity:100/210 - (47%) Gaps:18/210 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly   119 ETEQL-----EPPEDEVLEEGVWSTEDPIEETPHGPAEKERPTVLTVEMLPAPYPPPASTPPPAP 178
            |||:.     |.||::....|:...|:.:.:........:....:.||..        ....|..
Zfish    23 ETEEAFRVKHEDPEEQTDLVGLKEEEEELNDMEGKEQCVKHQDFVNVEQF--------IKIEPTS 79

  Fly   179 AGAVKGK-----LHVCAICGNGYPRKSTLDTHMRRHNDERPYECEICHKSFHVNYQLKRHIRQHT 238
            :|....|     |.:|..||..:.||..|..||..|..|:|:.||.|.|||:....|..|:|.||
Zfish    80 SGKTDQKNKPNQLFICQQCGRAFSRKYKLKNHMTIHTGEKPFTCEQCGKSFNYKENLNYHMRVHT 144

  Fly   239 GAKPYTCQYCQRNFADRTSLVKHERTHRNERPYACKTCGKKFTYASVLKMHYKTHTGEKPHICQL 303
            |.:|::|:.|.::|..:.:|..|.|.|..|:|:.|:.|||.:.:...|..|.:.||||:|..|:.
Zfish   145 GERPFSCKECGKSFVHKAALKYHTRVHTGEKPFTCELCGKSYVHKGNLNYHKRGHTGERPFTCEQ 209

  Fly   304 CNKSFARIHNLVAHL 318
            |.|||.:.|.|..|:
Zfish   210 CGKSFVQKHKLNNHI 224

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4424NP_650859.3 zf-AD 10..92 CDD:285071
C2H2 Zn finger 189..209 CDD:275368 8/19 (42%)
DUF45 <204..281 CDD:302795 31/76 (41%)
COG5048 210..>345 CDD:227381 43/109 (39%)
C2H2 Zn finger 217..237 CDD:275368 9/19 (47%)
C2H2 Zn finger 245..265 CDD:275368 6/19 (32%)
zf-H2C2_2 257..282 CDD:290200 10/24 (42%)
C2H2 Zn finger 273..293 CDD:275368 6/19 (32%)
zf-H2C2_2 286..310 CDD:290200 12/23 (52%)
C2H2 Zn finger 301..320 CDD:275368 8/18 (44%)
zgc:162936NP_001353568.1 C2H2 Zn finger 95..115 CDD:275368 8/19 (42%)
SFP1 <117..200 CDD:227516 30/82 (37%)
C2H2 Zn finger 123..143 CDD:275368 9/19 (47%)
C2H2 Zn finger 151..171 CDD:275368 6/19 (32%)
C2H2 Zn finger 179..199 CDD:275368 6/19 (32%)
zf-H2C2_2 191..216 CDD:316026 12/24 (50%)
C2H2 Zn finger 207..227 CDD:275368 8/18 (44%)
COG5048 231..597 CDD:227381
C2H2 Zn finger 235..255 CDD:275368
C2H2 Zn finger 263..283 CDD:275368
C2H2 Zn finger 291..308 CDD:275368
C2H2 Zn finger 330..350 CDD:275368
C2H2 Zn finger 358..378 CDD:275368
C2H2 Zn finger 435..455 CDD:275368
C2H2 Zn finger 463..483 CDD:275368
C2H2 Zn finger 491..511 CDD:275368
C2H2 Zn finger 519..539 CDD:275368
C2H2 Zn finger 547..567 CDD:275368
C2H2 Zn finger 575..595 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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