DRSC/TRiP Functional Genomics Resources

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Protein Alignment MED25 and Ptov1

DIOPT Version :10

Sequence 1:NP_650854.1 Gene:MED25 / 42385 FlyBaseID:FBgn0038760 Length:863 Species:Drosophila melanogaster
Sequence 2:NP_598710.1 Gene:Ptov1 / 84113 MGIID:1933946 Length:416 Species:Mus musculus


Alignment Length:415 Identity:108/415 - (26%)
Similarity:179/415 - (43%) Gaps:100/415 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   347 PGQNRWMYPNQPGQARPPFMQGA---GNVGGVGQG------GGMQQNPNSALISRINA------- 395
            ||..|...|.:......|.|:||   |.:|.:|..      ||:..|.: .|.:::.|       
Mouse    38 PGGPRGPQPPRIRARSAPPMEGARVFGALGPIGPSSPGLTLGGLAVNEH-RLSNKLLAWSGVLEW 101

  Fly   396 ----PPPNQTVTSLQQQQQQQAQQQQQQQQQAQQQQQQR-MQMLSQQQMLNHQQLQQQQQLAQ-- 453
                .|.:.:...|::....||...|.:..:..|..|:. ||::.||.:.....|.:..||||  
Mouse   102 QEKRRPFSDSTAKLKRTLPCQAYVNQGENLETDQWPQKLIMQLIPQQLLTTLGPLFRNSQLAQFH 166

  Fly   454 ---QQQQQQQGQQQQQVNPNAG--------------------------NNMMPASNAGNMSNPQQ 489
               :.....:|..:...|..||                          ..::|...:|.::..:|
Mouse   167 FTNRDCDSLKGLCRIMGNGFAGCMLFPHISPCEVRVLMLLYSSKKKIFMGLIPYDQSGFVNAIRQ 231

  Fly   490 ----QQQQVGQ---QSNPQQQGNPQQQQQGNSQQEQASLREKIWTGVLEWSEKPKSDQQKIPHTL 547
                ::|.||.   .|.|.|..|.               :...|:||:||.|.......:....|
Mouse   232 VITTRKQAVGPGGVHSGPVQIVNN---------------KFLAWSGVMEWQEPRPEPNSRSKRWL 281

  Fly   548 QCTVCTNIKDGEPEIKAENWPPKLLMQLMPKHLVGNIGGQFLKDSKMVVFRPTPG-EALDSLAKM 611
            ...|..|  .|| .::.:.||.:|.|||:|:.|:..:...| ::|::|.|..|.. |.|.||.::
Mouse   282 PSHVYVN--QGE-ILRTDQWPRRLFMQLIPQQLLTTLVPLF-RNSRLVQFHFTKDMETLKSLCRI 342

  Fly   612 MTSGYAGCVHFSSIPNSPACDLKVLILLYTPDRNAFLGFIPNNQAMFVERLRKVIQQKQHGNMQQ 676
            |.:|:|||||||   ...:|:::||:|||:.::..|:|.||::|:.||..:|:||          
Mouse   343 MDNGFAGCVHFS---YKASCEVRVLMLLYSSEKKIFIGLIPHDQSNFVNGIRRVI---------- 394

  Fly   677 QQQQQQMMQQQGKSPMELQQQQQQQ 701
             ..|||::|:      .|:|:|||:
Mouse   395 -ANQQQVLQR------SLEQEQQQR 412

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MED25NP_650854.1 Med25_VWA 5..218 CDD:463253
Med25 520..671 CDD:463243 53/151 (35%)
Ptov1NP_598710.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..54 4/15 (27%)
Med25 89..238 CDD:463243 24/148 (16%)
Interaction with FLOT1. /evidence=ECO:0000250 184..416 75/268 (28%)
Med25 254..399 CDD:463243 55/177 (31%)
Blue background indicates that the domain is not in the aligned region.

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