Sequence 1: | NP_650854.1 | Gene: | MED25 / 42385 | FlyBaseID: | FBgn0038760 | Length: | 863 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001365284.1 | Gene: | MED25 / 81857 | HGNCID: | 28845 | Length: | 796 | Species: | Homo sapiens |
Alignment Length: | 880 | Identity: | 243/880 - (27%) |
---|---|---|---|
Similarity: | 346/880 - (39%) | Gaps: | 238/880 - (27%) |
- Green bases have known domain annotations that are detailed below.
Fly 8 LADVVFVIEGSAINGAYINELKTNYILPTLEHFTTGSIDEREYLIAERFATLYGIVVYRTAANLL 72
Fly 73 EPVCSTYGPFLQPQKVMETIERLPLVGGGMESCAHMAEGFAAAHGCFDDISERRQLLDQTSVQRH 137
Fly 138 CILICNSPPYQMPTTESWKYPGKSCEQLAALFNERKINLSIIAPRKMPVLFKLFMKA------DG 196
Fly 197 DQPITSKNYAKNIRHLVLLKGYSLK---ERAPSPNSMAAQMAAPNAAQ--ATVQQQQQQQQNQAG 256
Fly 257 QQQQGQGMPMDTTPAQQQQQQQQQQQQQQQQG-NPQQQVMNMNTMQQQQPGPNPPAGLLNPQQQQ 320
Fly 321 QLLQQQQQNQFVSNQMQNQNFQQNVGPGQNRWMYPNQPGQARPPFMQGAGNVGGVGQGGGMQQNP 385
Fly 386 NSALISRINAPPPNQTVTSLQQQQQQQAQQQQQQQQQAQQQQQQRMQMLSQQQMLNHQQLQQQQQ 450
Fly 451 LAQQQQQQQQGQQQQQVNPNAGNNMMPASNAGNMSNPQQQQQQVGQQSNPQQQGNPQQQQQGNSQ 515
Fly 516 QEQASLREKIWTGVLEWSEKPK----SDQQKIPHTLQCTVCTNIKDGEPEIKAENWPPKLLMQLM 576
Fly 577 PKHLVGNIGGQFLKDSKMVVFRPTPG--EALDSLAKMMTSGYAGCVHFSSIPNSPACDLKVLILL 639
Fly 640 YTPDRNAFLGFIPNNQAMFVERLRKVIQQKQHGNMQQQ---QQQQQMMQQQ---GKSPMELQQQQ 698
Fly 699 QQQQQQQQMQQDNSQQQHYNQFQLNMQMGGGGPGGGPGPGPGGMPMQQNQMQMNMMQQQRMPLGV 763
Fly 764 GVGVGVGPGGVPNPNLQQQLQQVAPNVAAMQQQQAQQQQQRMVRPMMSNNNPGLRQLLQHQTTPG 828
Fly 829 NQFRPQMGGQN------------PNQMGAGGPMVG 851 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
MED25 | NP_650854.1 | Med25_VWA | 4..218 | CDD:288159 | 81/215 (38%) |
Med25 | 524..671 | CDD:288130 | 63/152 (41%) | ||
MED25 | NP_001365284.1 | Interaction with the Mediator complex | 1..226 | 82/216 (38%) | |
Med25_VWA | 12..226 | CDD:402725 | 82/216 (38%) | ||
Med25_SD1 | 228..383 | CDD:402701 | 34/160 (21%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 233..274 | 11/42 (26%) | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 299..390 | 18/90 (20%) | |||
Interaction with VP16 | 389..543 | 22/153 (14%) | |||
Interaction with CREBBP. /evidence=ECO:0000269|PubMed:17641689 | 395..545 | 25/153 (16%) | |||
Med25 | 400..545 | CDD:402699 | 25/148 (17%) | ||
Interaction with RARA. /evidence=ECO:0000269|PubMed:17641689 | 564..653 | 38/90 (42%) | |||
Interaction with RARA. /evidence=ECO:0000269|PubMed:17641689 | 640..707 | 29/72 (40%) | |||
LXXLL motif | 646..650 | 2/3 (67%) | |||
Med25_NR-box | 664..>715 | CDD:402709 | 21/56 (38%) | ||
zf-C2H2_12 | 730..791 | CDD:408440 | 12/60 (20%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C165142933 | |
Domainoid | 1 | 1.000 | 136 | 1.000 | Domainoid score | I4949 |
eggNOG | 1 | 0.900 | - | - | E1_28J9E | |
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 276 | 1.000 | Inparanoid score | I2965 |
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 1 | 1.010 | - | - | QHG47953 | |
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 1 | 1.000 | - | - | FOG0004644 | |
OrthoInspector | 1 | 1.000 | - | - | mtm8619 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_108352 | |
Panther | 1 | 1.100 | - | - | LDO | PTHR12433 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R4646 |
SonicParanoid | 1 | 1.000 | - | - | X6592 | |
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 1 | 0.960 | - | - | ||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
14 | 13.790 |