Sequence 1: | NP_650854.1 | Gene: | MED25 / 42385 | FlyBaseID: | FBgn0038760 | Length: | 863 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001008305.1 | Gene: | Ptov1 / 292888 | RGDID: | 1306977 | Length: | 416 | Species: | Rattus norvegicus |
Alignment Length: | 409 | Identity: | 108/409 - (26%) |
---|---|---|---|
Similarity: | 179/409 - (43%) | Gaps: | 105/409 - (25%) |
- Green bases have known domain annotations that are detailed below.
Fly 357 QPGQAR----PPFMQGA---GNVGGVGQG------GGMQQNPNSALISRINA-----------PP 397
Fly 398 PNQTVTSLQQQQQQQAQQQQQQQQQAQQQQQQR-MQMLSQQQMLNHQQLQQQQQLAQ-----QQQ 456
Fly 457 QQQQGQQQQQVNPNAG--------------------------NNMMPASNAGNMSNPQQ----QQ 491
Fly 492 QQVGQ---QSNPQQQGNPQQQQQGNSQQEQASLREKIWTGVLEWSEKPKSDQQKIPHTLQCTVCT 553
Fly 554 NIKDGEPEIKAENWPPKLLMQLMPKHLVGNIGGQFLKDSKMVVFRPTPG-EALDSLAKMMTSGYA 617
Fly 618 GCVHFSSIPNSPACDLKVLILLYTPDRNAFLGFIPNNQAMFVERLRKVIQQKQHGNMQQQQQQQQ 682
Fly 683 MMQQQGKSPMELQQQQQQQ 701 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
MED25 | NP_650854.1 | Med25_VWA | 4..218 | CDD:288159 | |
Med25 | 524..671 | CDD:288130 | 53/147 (36%) | ||
Ptov1 | NP_001008305.1 | Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1..53 | 3/7 (43%) | |
Med25 | 93..238 | CDD:288130 | 24/144 (17%) | ||
Interaction with FLOT1. /evidence=ECO:0000250 | 184..416 | 75/268 (28%) | |||
Med25 | 258..399 | CDD:288130 | 54/158 (34%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C166336636 | |
Domainoid | 1 | 1.000 | 110 | 1.000 | Domainoid score | I6158 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 1 | 1.000 | - | - | FOG0004644 | |
OrthoInspector | 1 | 1.000 | - | - | mtm9099 | |
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR12433 |
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 1 | 0.960 | - | - | ||
7 | 6.900 |