DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG31213 and ABCA9

DIOPT Version :9

Sequence 1:NP_001262752.1 Gene:CG31213 / 42382 FlyBaseID:FBgn0051213 Length:1809 Species:Drosophila melanogaster
Sequence 2:NP_001330984.1 Gene:ABCA9 / 836295 AraportID:AT5G61730 Length:950 Species:Arabidopsis thaliana


Alignment Length:634 Identity:158/634 - (24%)
Similarity:276/634 - (43%) Gaps:105/634 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   228 VVAEKERHQKAVLTAMGFSNSIHWLAWYTKSMLLLLLCLLIMISIFSIGLIYEF---SSLVCLMT 289
            ||.|||...:..:|.||...|.:||:|.....:|..:..|.:: :|.:...:||   :|.|.:..
plant   250 VVTEKELKLREAMTTMGVYESAYWLSWLIWEGILTFVSSLFLV-LFGMMFQFEFFLKNSFVLVFL 313

  Fly   290 IFLVYIHSLVLFAFFISSFFSRSLSAVVATILMYFSTALPFLIVGAENSSVAAQTAASIGLNSAL 354
            :|.::..:::..||.:||..|:|.||.....|::        :||.....|   |.|....:|| 
plant   314 LFFLFQFNMIGLAFALSSIISKSSSATTVGFLVF--------LVGFITQIV---TTAGFPYSSA- 366

  Fly   355 FYILDSVAVMEMQSVGAQ--WYTI-DNTASSGYKLSIVGYMLIMIS------ISWIELLIC---- 406
                        .|:|::  |... .||.|:|.:|     :|...|      |||.|..||    
plant   367 ------------YSIGSRVIWSLFPPNTFSAGLQL-----LLEATSSPGDSGISWSERAICAGGE 414

  Fly   407 -------------------------LYIEAVRTGEFEVPQPWSYPFQRRYWCPLRYGSSVFHQGA 446
                                     ||.:.:......|.:...|..:..||.. :.|:.| .:|:
plant   415 STCVITTNKIYIWLVGTFFFWFVLALYFDNIIPNASGVRKSIFYFLKPSYWTG-KEGNKV-EEGS 477

  Fly   447 LLPLAGKNSEGNLPAAHPTRQPIIYLDDRTQENFQRVN--ISKKIGIEVRSLSKTFGFR------ 503
            :....|...    |..|.|.:....|::......|.::  :...|.:::..|:||:...      
plant   478 ICSCIGSVP----PVEHITPEDEDVLEEEILVKQQAMDGRVDPNIAVQIHGLAKTYPGTTKLGCC 538

  Fly   504 --------NVVKDLFFNVYENEITALVGHKGSGKTTIIMMLCGILQPTTGTVLINGYDIVTEAKV 560
                    :.||.|:.|:.::::..|:|..|:||||.|..|.||...|.|...|.|..|.:...:
plant   539 KCTKTSPFHAVKGLWMNIAKDQLFCLLGPNGAGKTTTISCLTGINPVTGGDAKIYGNSIRSSVGM 603

  Fly   561 A--KSSLGICPQHSVIFKGMSARDHIYFFSRVKGYNKTEAMMESNIYISKLGLVDSQKWDAMRLS 623
            :  :..:|:|||..:::..:|:.:|::.|:.:||...:.....:...:..:.|..|.|..|...|
plant   604 SNIRKMIGVCPQFDILWDALSSEEHLHLFASIKGLPPSSIKSIAEKLLVDVKLTGSAKIRAGSYS 668

  Fly   624 PGNQRRLSLACALCAGSKVILCDEPSSGLDPIGRHELMRFLQKEKHGRTILMTTQQLEEGEILAD 688
            .|.:||||:|.||....|::..|||::|:|||.|..:...:|:.|.||.|::||..:||.:||:|
plant   669 GGMKRRLSVAIALIGDPKLVFLDEPTTGMDPITRRHVWDIIQESKKGRAIILTTHSMEEADILSD 733

  Fly   689 RIAIMNDGQILCYGTLGYLKQLPFTSYTLSCQMAPNSKADNLTDLVRLYM------TTTTSPVFH 747
            ||.||..|::.|.||...||....|.:..:.....|.|......|.|.:.      .|..:..| 
plant   734 RIGIMAKGRLRCIGTSIRLKSRFGTGFVATVSFIENKKDGAPEPLKRFFKERLKVEPTEENKAF- 797

  Fly   748 GVDVSYKLPRSQIDRFPEFFQQLEENKKSLNVVSFGVSDSTLDGIYLSL 796
               :::.:|..:......||.:|::.:....:....:..:||:.::|::
plant   798 ---MTFVIPHDKEQLLKGFFAELQDRESEFGIADIQLGLATLEEVFLNI 843

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31213NP_001262752.1 ABC2_membrane_3 32..>295 CDD:289468 20/69 (29%)
ABC_subfamily_A 491..708 CDD:213230 74/232 (32%)
drrA 498..796 CDD:130256 89/319 (28%)
ABC2_membrane_3 <1132..1285 CDD:289468
CcmA 1391..1672 CDD:224054
ABC_subfamily_A 1391..1609 CDD:213230
ABCA9NP_001330984.1 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 99 1.000 Domainoid score I2373
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D131191at2759
OrthoFinder 1 1.000 - - FOG0000051
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR19229
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
55.020

Return to query results.
Submit another query.