DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG31213 and ABCA2

DIOPT Version :9

Sequence 1:NP_001262752.1 Gene:CG31213 / 42382 FlyBaseID:FBgn0051213 Length:1809 Species:Drosophila melanogaster
Sequence 2:NP_190357.2 Gene:ABCA2 / 823927 AraportID:AT3G47730 Length:983 Species:Arabidopsis thaliana


Alignment Length:994 Identity:227/994 - (22%)
Similarity:408/994 - (41%) Gaps:221/994 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 QKYRLLLWKDIK---LQLTNWVELVMIIF-LSALMPIFFSIGTKVAKSIFPPDIEMEKSPGPKSV 69
            :|..||.|:..:   |||......:::|| :.|.|...|:..|.: |::..|...:  ||.....
plant    19 KKNLLLSWRSKRATFLQLFASFFFILLIFCIQAAMEKSFASSTAL-KTVTDPTALI--SPPIPPC 80

  Fly    70 NTSLFVDL--YFTPNNGILEQLITQLAN---------------ISEFKSVEVFDTNSELYLQLMI 117
            ....||:|  |....:|.....:||:.|               :..|...|..||      .||.
plant    81 EDKFFVNLPCYDFVWSGNRSSKVTQIVNAIMKNNPGRSIPIEKVRSFVDPEAVDT------WLMA 139

  Fly   118 N------------RNAIGIAFPSEWYDIKSCPEVLNLTIFMPLSIKRKDFKYFESGFLLLQER-I 169
            |            |||..|::..:   ..|.|| :|...|...:.|      |:....:..|| |
plant   140 NPLLVPGALHFIERNATVISYGIQ---TNSTPE-MNRGRFEDPTFK------FQIPLQIAAEREI 194

  Fly   170 SKIFIFFKNAGNGKIPRVL-MNHFPYPSYVPNHYAESAKAM-----TYMTLISFFLPCITIAKYV 228
            ::..|     |:.....|: ...||:|:      .|:..|:     |:...::.|...:.|:. :
plant   195 ARSLI-----GDPNFNWVVGFKEFPHPT------IEAIVALDTIGPTFFLAVAMFGFVLQISS-L 247

  Fly   229 VAEKERHQKAVLTAMGFSNSIHWLAWYTKSMLLLLLCLLIMISIFSIGLIYEF-----SSLVCLM 288
            :.|||...:..:|.||..::.:||:|.|...:|..:..|:.: :|  |::::|     :|...:.
plant   248 ITEKELKLRQAMTMMGVFDTAYWLSWLTWEGILTAISALLTV-LF--GMMFQFDFFLKNSFPVVF 309

  Fly   289 TIFLVYIHSLVLFAFFISSFFSRSLSAVVATILMYFSTALPFLIVGAENSSVAAQTAASIGLNSA 353
            .:|:::..:|:..||.:|:|.|:|.||......::        :||     ...|.|.|.|...|
plant   310 LLFMLFQFNLIGLAFMLSAFISKSTSATTVGFFVF--------LVG-----FVTQLATSSGFPYA 361

  Fly   354 LFYILDSVAVMEMQSVGAQWYTI-DNTASSGYK-------------------------------L 386
            ..|         .:.:.|.|... .||.|.|.|                               |
plant   362 KKY---------SRMIRALWSLFPPNTFSQGLKLLADATSTPQDPGISWSKRAECGPNDDTGCVL 417

  Fly   387 SIVGYMLIMISISWIELLICLYIEAVRTGEFEVPQPWSYPFQRRYWCPLRYGSSVFHQGALLPLA 451
            :|....|.::...::..::.||.:.:......|.:...|..:..||  ...|.:...:|.:....
plant   418 TINDIYLWLLGTFFLWFVLALYFDNITPNASGVRKSIFYFLKPGYW--TGKGGNRVEEGGICSCI 480

  Fly   452 GKNSEGNLPAAHPTRQPIIYLDDRT---QENFQRVNISKKIGIEVRSLSKT------FG------ 501
            |...    |..|.|......|::.|   |.:.:.: :...:.:::|.|:||      ||      
plant   481 GSVP----PVDHITPDDEDVLEEETLVKQHSMEGL-VDPNVAVQIRGLAKTYPGTTKFGCCKCKK 540

  Fly   502 ---FRNVVKDLFFNVYENEITALVGHKGSGKTTIIMMLCGILQPTTGTVLINGYDIVTEAKVA-- 561
               | :.:|.|:.|:.::::..|:|..|:||||.|..|.|:...|.|..||.|..|.:...::  
plant   541 TSPF-HALKGLWMNIAKDQLFCLLGPNGAGKTTTINCLTGLFPVTGGDALIYGNSIRSSVGMSNI 604

  Fly   562 KSSLGICPQHSVIFKGMSARDHIYFFSRVKGY--NKTEAMMESNIYISKLGLVDSQKWDAMRLSP 624
            :..:|:|||..:::..:|..:|:..|:.:||.  :...:|:|.:  ::::.|.::.|..|...|.
plant   605 RKMIGVCPQFDILWDALSGEEHLKLFASIKGLPPSSINSMVEKS--LAEVKLTEAGKIRAGSYSG 667

  Fly   625 GNQRRLSLACALCAGSKVILCDEPSSGLDPIGRHELMRFLQKEKHGRTILMTTQQLEEGEILADR 689
            |.:||||:|.:|....|::..|||::|:|||.|..:...:|:.|.||.|::||..:||.:||:||
plant   668 GMKRRLSVAVSLIGDPKLVFLDEPTTGMDPITRRHVWDIIQETKKGRAIILTTHSMEEADILSDR 732

  Fly   690 IAIMNDGQILCYGTLGYLKQLPFTSYTLSCQMAPNSK------ADNLTDLVRLYMT-TTTSPVFH 747
            |.||..|::.|.||...||....|.:..:.....::.      :|:...:.:.:.. ....|:..
plant   733 IGIMAKGRLRCIGTSIRLKSRFGTGFIANISFVESNNHNGEAGSDSREPVKKFFKDHLKVKPIEE 797

  Fly   748 G-VDVSYKLPRSQIDRFPEFFQQLEENKKSLNVVSFGVSD-----------------------ST 788
            . ..:::.:|..:.:....||.:|::.::     .||:||                       :.
plant   798 NKAFMTFVIPHDKENLLTSFFAELQDREE-----EFGISDIQLGLATLEEVFLNIARKAELESAA 857

  Fly   789 LDGIYLSLDYGQGSS-------RLRG--GADPGVNDK---VEFGVQTDKAIRTKDRANNSLVRYQ 841
            :||..::||...|||       |..|  |.:...|.:   ||...|.|:        :.||....
plant   858 VDGTMVTLDLTSGSSVEIPVGARFIGIPGTETAENPRGVMVEVYWQQDE--------SGSLCISG 914

  Fly   842 HQVDPPNETILNTKTPINP 860
            |..:.|....:....|:.|
plant   915 HSTEMPIPENIPVTDPVAP 933

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31213NP_001262752.1 ABC2_membrane_3 32..>295 CDD:289468 67/304 (22%)
ABC_subfamily_A 491..708 CDD:213230 77/235 (33%)
drrA 498..796 CDD:130256 90/347 (26%)
ABC2_membrane_3 <1132..1285 CDD:289468
CcmA 1391..1672 CDD:224054
ABC_subfamily_A 1391..1609 CDD:213230
ABCA2NP_190357.2 rim_protein <186..>861 CDD:130324 164/726 (23%)
ABC_subfamily_A 518..751 CDD:213230 77/235 (33%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 99 1.000 Domainoid score I2373
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D131191at2759
OrthoFinder 1 1.000 - - FOG0000051
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR19229
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
66.020

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