Sequence 1: | NP_001262752.1 | Gene: | CG31213 / 42382 | FlyBaseID: | FBgn0051213 | Length: | 1809 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001296394.1 | Gene: | abca1a / 558924 | ZFINID: | ZDB-GENE-031006-12 | Length: | 2268 | Species: | Danio rerio |
Alignment Length: | 2013 | Identity: | 489/2013 - (24%) |
---|---|---|---|
Similarity: | 842/2013 - (41%) | Gaps: | 487/2013 - (24%) |
- Green bases have known domain annotations that are detailed below.
Fly 15 LWKDIKLQLTNWVE------LVMIIFLSALMPIFFSI---GTK---------VAKSIFPPDIEME 61
Fly 62 KSPGPKSVNTSLFVDLYFTPNNGILEQLITQLANISEFKSVEVFD--TNSELY----LQLMINRN 120
Fly 121 A-IGIAFPSEWYDIKSCPEVLNLTIFMPL-SIKR------------------KDFKYFESGFLLL 165
Fly 166 QERISKIFIFFKNAGNGKIPRVLMNHFPYPSYVPNHYAE--SAKAMTYMTLISFFLPCITIAKYV 228
Fly 229 VAEKERHQKAVLTAMGFSNSIHWLAWYTKSMLLLLLCLLIMISIFSI---------GLIYEFSSL 284
Fly 285 VCLMTIFLVYIHSLVLFAFFISSFFSRSLSAVVATILMYFSTALPFLIVGAENSSV--AAQTAAS 347
Fly 348 IGLNSALFYILDSVAVMEMQSVGAQWYTIDNTASSGYKLSIVGYMLIMISISWIELLICLYIEAV 412
Fly 413 RTGEFEVPQPWSYPFQRRYWCPLRYG--SSVFHQGALLPLAGK-NSEGNLPAAHPTR-QPIIYLD 473
Fly 474 DRTQENFQRVNISKKIGIEVRSLSKTFGFRNVVKDLFFNVYENEITALVGHKGSGKTTIIMMLCG 538
Fly 539 ILQPTTGTVLINGYDIVTEAKVAKSSLGICPQHSVIFKGMSARDHIYFFSRVKGYNKTEAMMESN 603
Fly 604 IYISKLGLVDSQKWDAMRLSPGNQRRLSLACALCAGSKVILCDEPSSGLDPIGRHELMRFLQKEK 668
Fly 669 HGRTILMTTQQLEEGEILADRIAIMNDGQILCYGTLGYLKQLPFTSYTL------------SCQM 721
Fly 722 APN----SK-------------------ADNLTDLVRLYMTTTTSPVFH-----------GVDVS 752
Fly 753 YKLP--RSQIDRFPEFFQQLEENKKSLNVVSFGVSDSTLDGIYLSLDYGQGSSRLRGGADPGVND 815
Fly 816 KVEFGVQTDKAIRTKDRANNSLVRYQHQVDPPNETILNTKTPINPIEIWRPIDRE---------K 871
Fly 872 GSCMAQ-------------WQAMFI---KKKNYTASRAL--IFILI-----LIIPLFYYIIVLGT 913
Fly 914 AASEKCAHRTDKQPVLPLSLDYYSYDDMII------------LLEV--DKQLYK----------- 953
Fly 954 -----SEGEAYVQLVKEPATVESVDSIF----------SHLLKA--------------------P 983
Fly 984 PIIR------------RDIK----RKY--VCGASFNNASTITAWFN------------------- 1011
Fly 1012 ----SDAFEHSAPIALNLVYNALGKAVFEDQDFSI----LVNR--GDLHDF-----------IWL 1055
Fly 1056 NN---------ASSMRRRYKRQNDPDYTDYSDYEIQEYDVVVKPNSSSTSGQHNKSNPGDDNIIT 1111
Fly 1112 VQMSIIEAASTLYNEKGKRKQLFGTLIIITAYIALCLSI----FSIFVTKERVEHFKMQQEIYGV 1172
Fly 1173 TLFYFWSTHFVGDFLIYAIYMGALTIAIYHFTIWYQ-----------VVVMLLLIGFACLPFVYL 1226
Fly 1227 CSLLFSLPNIAFAGIFAILVMTG--GMLFSFMYML---TLITDVN--FTTVFAILPMYVGTFGLF 1284
Fly 1285 KCLAWREYCNREVLPPIEELDCKFGNCNVFCACKPERTW----MEVWLLMVHCLVWFIFLWFSNF 1345
Fly 1346 GYEIGYRFKPK---LSNRIWHNNEKHIRVLDEERRV----GLIPKYEHEDYPIIVDQVTKNYCR- 1402
Fly 1403 AKNAVQLVSFAIRPGDTFGLLGAQGAGKTSIFQMIAGETSMSHGNIYVRGHSLREHRNAAKMEVG 1467
Fly 1468 FCPQGDNAPKYLTGRQLLRIHCLLHGVPKDHIKAVSEQMAIEFNFKDQLDRPIHTYSGGKKRKLN 1532
Fly 1533 IALAIDSG-SVLCLDDTNGSVDHATQRFIWRKLEAVKRSGRPVLLTTQSMEEANAVCSRVAFLVA 1596
Fly 1597 GEMMFIGSLQQVRSEVSNTIVIRLRVNPSDGKLKRRFQQLIADMAELFPLATLHEALETCLIYHI 1661
Fly 1662 NINVTTLANLFYQMEKIRNEGLLEDYSITQVSLDEIY-RILNDEED-PNLVDLDSTHNSEVLE 1722 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
CG31213 | NP_001262752.1 | ABC2_membrane_3 | 32..>295 | CDD:289468 | 71/311 (23%) |
ABC_subfamily_A | 491..708 | CDD:213230 | 81/216 (38%) | ||
drrA | 498..796 | CDD:130256 | 108/345 (31%) | ||
ABC2_membrane_3 | <1132..1285 | CDD:289468 | 43/174 (25%) | ||
CcmA | 1391..1672 | CDD:224054 | 94/282 (33%) | ||
ABC_subfamily_A | 1391..1609 | CDD:213230 | 79/219 (36%) | ||
abca1a | NP_001296394.1 | rim_protein | 1..2233 | CDD:130324 | 484/1994 (24%) |
ABC_subfamily_A | 904..1122 | CDD:213230 | 85/237 (36%) | ||
ABC_subfamily_A | 1919..2139 | CDD:213230 | 80/226 (35%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 1 | 1.010 | - | - | QHG53524 | |
OrthoDB | 1 | 1.010 | - | - | D131191at2759 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0000051 | |
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
4 | 3.930 |