DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG31213 and abca4b

DIOPT Version :9

Sequence 1:NP_001262752.1 Gene:CG31213 / 42382 FlyBaseID:FBgn0051213 Length:1809 Species:Drosophila melanogaster
Sequence 2:XP_021322694.1 Gene:abca4b / 555506 ZFINID:ZDB-GENE-050517-4 Length:2327 Species:Danio rerio


Alignment Length:1891 Identity:428/1891 - (22%)
Similarity:780/1891 - (41%) Gaps:385/1891 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    85 ILEQLITQLANISEFKSVEVF--------DTNSELYLQLMINRNAIGIAFPS--EWYDIKSCPEV 139
            :.:|.|......||..|::.|        .|:..|:| |..|:...|:.|..  .|         
Zfish   505 LADQAIRMFNRYSECISLDKFVGHMDENLMTHQALHL-LGENKFWAGLVFMDMYPW--------- 559

  Fly   140 LNLTIFMPLSIKRK-----------------------------DFKYFESGFLLLQERISKIFIF 175
               ||.:|..:|.|                             |.:|...||..||:.|.. .|.
Zfish   560 ---TIELPRHVKFKIRMDIDAVERTNKIKDRYWDPGPRADPVEDHRYIWGGFAYLQDLIEH-GIL 620

  Fly   176 FKNAGNGKIPRVLMNHFPYPSYVPNHYAESA-KAMTYMTLISFFLPCITIAKYVVAEKERHQKAV 239
            ..:.|:.....|.:...|||.||.:.:..:. :......::::......:.|.:|.|||...|..
Zfish   621 KLHTGHDWPLGVYLQQMPYPCYVDDMFMLTLNRCFPIFMVLAWIYSVSMVVKSIVLEKEMRLKET 685

  Fly   240 LTAMGFSNSIHWLAWYTKSMLLLLLCLLIMISIFSIGLIYEFSSLVCLMTIFLVYIHSLVLFAFF 304
            |.|||.||.:.|..|:..|.:::.....::..|...|.:..:|:.:.|....|.:..:.::..|.
Zfish   686 LKAMGVSNGVIWYTWFIDSFIMMTASTALLTGIVMAGKVLNYSNPIILFLFLLTFTVATIMQCFL 750

  Fly   305 ISSFFSRSLSAVVATILMYFSTALPFLIVGAENSSVAAQTAASIGLNS--ALFYILDSVAVMEMQ 367
            :|.||:::..|...:.::||:..||.:...|....:......::.|.|  |..:..:.::..|.|
Zfish   751 MSVFFNKANLAAACSGIIYFTLYLPHIFCFAWQDRITKDMKLAVSLLSPVAFGFGTEYLSRYEEQ 815

  Fly   368 SVGAQWYTIDNTASSGYKLSIVGYMLIMISISWIELLICLYIEAVRTGEFEVPQPWSYPFQRRYW 432
            .:|.||..|..:...|.:.|....:.:|:..:.:..::..|::.|..|::.:.:|:.:|.|..||
Zfish   816 GLGLQWDNIGTSPLEGDEYSFFTSIRMMLLDAVLYGVLAWYLDNVFPGQYGIGRPFYFPLQSSYW 880

  Fly   433 C----PLRYGSSV--------------FHQGALLPLAGKNSEGNLPAAH-------------PTR 466
            .    |....::|              ...|.|.| ..:...|:..:.|             ..|
Zfish   881 LKPSPPSETSNAVPEKPLENHVEKQEDVEYGGLSP-EHRECNGSRNSKHCKHKEKRERMEKERER 944

  Fly   467 QPIIYLDDRTQEN-----------FQRVNISKKIGIEVRSLSKTFG--FRNVVKDLFFNVYENEI 518
            :..:.:.:..|:.           |:....|..||:.|:.|.|.:.  .|..|..|..|.||::|
Zfish   945 EEQLKMQEEIQQEEIQQWYCENPFFEPEPESLLIGVSVQDLVKMYNRYSRPAVDCLNMNFYESQI 1009

  Fly   519 TALVGHKGSGKTTIIMMLCGILQPTTGTVLINGYDIVTEAKVAKSSLGICPQHSVIFKGMSARDH 583
            |:.:||.|:||||.:.:|.|:..||:||..|.|.||.||....:.|||:||||:::||.::..:|
Zfish  1010 TSFLGHNGAGKTTTLSILTGLFPPTSGTAYIYGRDIRTEMDAIRQSLGMCPQHNILFKHLTVEEH 1074

  Fly   584 IYFFSRVKGYNKTEAMMESNIYISKLGLVDSQKWDAMRLSPGNQRRLSLACALCAGSKVILCDEP 648
            |.|:|.:||....||..|....:..|||...:..:|..||.|.||:||:|.|...||:|::.|||
Zfish  1075 ILFYSLMKGREHKEAEQEVENMLEDLGLPHKRDEEAQNLSGGMQRKLSVAMAFVGGSRVVILDEP 1139

  Fly   649 SSGLDPIGRHELMRFLQKEKHGRTILMTTQQLEEGEILADRIAIMNDGQILCYGTLGYLKQLPFT 713
            :||:||..|..:...|.|.:.|||::::|..::|.::|:||:||::.|::.|.|:..:||.....
Zfish  1140 TSGVDPYSRRSIWDLLLKYRTGRTVILSTHHMDEADLLSDRVAIISKGKLHCSGSPLFLKNCFGV 1204

  Fly   714 SY--TLSCQMAPNSKADNLTDLVRLYMTT--------------------------TTSPVFH--- 747
            .:  ||..:|....|.:|..|.......|                          .|:.:.|   
Zfish  1205 GFYLTLVRRMKDQRKKENECDCASECSCTCSTCTRYKEESQALQPERVLDGNVESITTLIHHHVP 1269

  Fly   748 --------GVDVSYKLPRS--QIDRFPEFFQQLEENKKSLNVVSFGVSDSTLDGIYLSLDYGQGS 802
                    |.:::|.||..  :...:...|::|||....:.:.|||:||::|:.|:|.:.     
Zfish  1270 EAKLIEMIGQEMTYLLPNKGFKYRAYASLFRELEETLGDMGLSSFGISDTSLEEIFLKVT----- 1329

  Fly   803 SRLRGGADPGVNDKVEFGVQTDKAIRTKDRANNSLVRYQHQVDPPNETILNTKTPINPIEIWRPI 867
                  ||   .:.....|..::.:..:.:..|..::.....:..|....:.::..:.....|.:
Zfish  1330 ------AD---GEAANSSVTPEQWMLQQRKNGNGFMKDTGLAEDANGVGASLESDSSEGRASRQV 1385

  Fly   868 DREKGSCMA--QWQAMFIKKKNYTASRALIFILILIIPLFYYIIVLGTAASEKCAHRTDKQPVLP 930
               ||..:.  |:.|:.:|:.::.......|:..:::|..:.:|.|....            ::|
Zfish  1386 ---KGFSLVLKQFHALLVKRFHHATRSHKDFLAQIVLPASFVLIALVFTM------------IVP 1435

  Fly   931 -------LSLDYYSYDDMIILLEVDKQLYKSEGEAYVQLVKEPA------TVESVDSIFSHL--- 979
                   |:|..:.|......:..::..:.........|:|:|.      ..:.:::||:.|   
Zfish  1436 PFGEYPCLTLTPWMYGPQFTFISNEQPSHPKMKHFIQTLLKDPGMGTRCMANQPLENIFTCLNSS 1500

  Fly   980 --LKAPPIIRRDIKRKYVCGASFNNASTITAWFN---SDAFEHSAPIALNLV------YNALGKA 1033
              .:.||:           ....:|..:...|.:   |.:.|.|..:.|.::      ...|...
Zfish  1501 SDWEVPPV-----------SPEVSNILSSPEWDSRNPSPSCECSTDLKLTMLPMCPAGAGGLPPR 1554

  Fly  1034 VFEDQDFSILV---NRGDLHDFI----------------WLNNA--------------------- 1058
            ..::....||:   || ::.|::                |:|..                     
Zfish  1555 QRKEPTGDILLDMTNR-NISDYLVKTYTKLIKTSLKSKYWVNEQRYGGISVGGRLPILDVDPEEI 1618

  Fly  1059 ----SSMRR-------RYKRQNDPDYTDYSDYEIQEYDVVVKPNSSSTSGQH------------- 1099
                |.:.|       ||.:....:...:..|...||:|.|..|:   .|.|             
Zfish  1619 QNIFSQLGRMMNIRGGRYSKSAMDELETFLHYMESEYNVKVWYNN---KGWHAMASFLNVANNAI 1680

  Fly  1100 ------NKSNPGDDNIITVQMSIIEAASTLYNEKGKRKQLFGTLIIIT---AYIALCL------- 1148
                  ..:||.|..|..:...:          ...::||....::.|   |.:|:|:       
Zfish  1681 LRAYLPPHANPSDYGITAINHPL----------NLTKEQLSEVTVLTTSVDAVVAICVIFAMSFI 1735

  Fly  1149 -SIFSIFVTKERVEHFKMQQEIYGVTLFYFWSTHFVGDFLIYAIYMGALTIAIYHFTIWYQ---- 1208
             :.|.:::.:|||...|..|.:.||:...:|..:|..|.|.|:: ..|:.:||:   :.:.    
Zfish  1736 PASFVLYLIQERVTKAKHLQFVSGVSPLVYWFANFFWDMLNYSV-STAMVVAIF---VGFDKKCY 1796

  Fly  1209 --------VVVMLLLIGFACLPFVYLCSLLFSLPNIAFAGIFAILVMTGGMLFSFMYMLTLITDV 1265
                    ::.:|.|.|::..|.:|..|.:|::|:.|:..:..|.:..|....:..::|.|..:.
Zfish  1797 TSPTNLPALIALLCLYGWSVTPMMYPLSYMFNVPSTAYVSLSCINLFIGINSSAITFILELFENN 1861

  Fly  1266 NFTTVF-AILPMYVGTFGLFKCLAWREYCNREVLPPIEELDCKFG-------------NCNVFCA 1316
            ....:| .:|...:..|..| ||. |...:..:...:.::..:||             ..|:|| 
Zfish  1862 RSLLMFNEVLKKVLLVFPHF-CLG-RGLIDMAMNQAVTDVYARFGEEFSMDPFRWNFVGKNLFC- 1923

  Fly  1317 CKPERTWMEVWLLMVHCLVWFIF-----------LWFSNFGYEIGYRFKPKLSNRIWHNNEKHIR 1370
                        :.|...|:|||           .|.|::|..:|              .::...
Zfish  1924 ------------MAVEGFVYFIFNLLIQYKFFLHHWISDYGMSLG--------------TDEDDD 1962

  Fly  1371 VLDEERRVGLIPKYEHEDYPIIVDQVTKNYCRAKN-AVQLVSFAIRPGDTFGLLGAQGAGKTSIF 1434
            |..|..|   |.|..:::..:::..::|.|.|.|. ||..:...:..|:.|||||..|||||:.|
Zfish  1963 VAQERER---IYKGGNKNDILLIRDLSKTYRRRKRPAVDKICVGVPAGECFGLLGVNGAGKTTTF 2024

  Fly  1435 QMIAGETSMSHGNIYVRGHSLREHRNAAKMEVGFCPQGDNAPKYLTGRQLLRIHCLLHGVPKDHI 1499
            :|:.|:|.::.|.:.|.|:|:..:.......:|:|||.|...:.||||:.|.::..|.|:|:..|
Zfish  2025 KMLTGDTDVTSGELSVAGYSILSNILDVHQNMGYCPQFDAIDELLTGREHLYLYARLRGIPESEI 2089

  Fly  1500 KAVSEQMAIEFNFKDQLDRPIHTYSGGKKRKLNIALA-IDSGSVLCLDDTNGSVDHATQRFIWRK 1563
            ..|:|....:....:.......|||||.||||:.|:| |....::.||:....:|..::||:|..
Zfish  2090 SRVAEWGIQKLGLSEYAGNCAGTYSGGNKRKLSTAIAMIGCPPLVLLDEPTTGMDPHSRRFLWTA 2154

  Fly  1564 LEAVKRSGRPVLLTTQSMEEANAVCSRVAFLVAGEMMFIGSLQQVRSEVSNTIVIRLRVNPSDGK 1628
            :.::.|.||.|:||:.||||..|:|:|:|.:|.|....:|::|.::.:.....|:.:::..:...
Zfish  2155 ILSIIRDGRAVVLTSHSMEECEALCTRLAIMVNGTFKCLGTIQHLKYKFGGGYVVTMKIKAAKPG 2219

  Fly  1629 LKRRFQQLIADMAELFPLATLHEALETCLIYHININVTTLANLFYQMEKIRNEGL-LEDYSITQV 1692
            |........:.|...||.....|.....|.|  .|...:||.:| |:.....|.| :||||::|.
Zfish  2220 LSPDLVPAESFMDSSFPGCIQREKHYNTLQY--EIAAASLARVF-QLVLTNKERLNIEDYSVSQT 2281

  Fly  1693 SLDEIY 1698
            :||:::
Zfish  2282 TLDQVF 2287

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31213NP_001262752.1 ABC2_membrane_3 32..>295 CDD:289468 54/249 (22%)
ABC_subfamily_A 491..708 CDD:213230 87/218 (40%)
drrA 498..796 CDD:130256 112/340 (33%)
ABC2_membrane_3 <1132..1285 CDD:289468 38/176 (22%)
CcmA 1391..1672 CDD:224054 88/282 (31%)
ABC_subfamily_A 1391..1609 CDD:213230 77/219 (35%)
abca4bXP_021322694.1 AAA 1..2315 CDD:333001 428/1891 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170582251
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53524
OrthoDB 1 1.010 - - D131191at2759
OrthoFinder 1 1.000 - - FOG0000051
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.950

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