DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG31213 and abca8

DIOPT Version :10

Sequence 1:NP_732473.2 Gene:CG31213 / 42382 FlyBaseID:FBgn0051213 Length:1809 Species:Drosophila melanogaster
Sequence 2:XP_031749971.1 Gene:abca8 / 549630 XenbaseID:XB-GENE-1005441 Length:1619 Species:Xenopus tropicalis


Alignment Length:1866 Identity:424/1866 - (22%)
Similarity:795/1866 - (42%) Gaps:419/1866 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 RNLTYCQKYRLLLWKDIKLQ-------LTNWVE---LVMIIFLSALMPIF--------------- 42
            |..:..|:...|.||::.|:       :..|::   .|:::.|.::|.:.               
 Frog     6 RETSLFQQTMALFWKNLLLKWRRKWHTILEWLQNLAFVLVMLLISVMGLSTFVQLEYNSPAEVLG 70

  Fly    43 ----------FSIG------------TKVAKSIFPPDIEMEKSPGPKSVNTSLFVDLYFTPNNGI 85
                      |.:|            .||||||..|.|::::               |....|  
 Frog    71 RLDAVDRSNNFKVGYVYTSPTSRDIMEKVAKSIIIPGIKVQE---------------YSDEGN-- 118

  Fly    86 LEQLITQLANISEFKSV--EVFDTNSELYLQLMINRNAIGIAFPSEWYDIKSCPEVLNLTIFM-- 146
               |:..:.|    |:|  ..|......:::..||    .||:|::::            .||  
 Frog   119 ---LLDDMTN----KAVVGVTFVDKFSYHIRYPIN----NIAYPNDYF------------AFMGF 160

  Fly   147 --PLSIKRKDFKYFESGFLLLQERISKIFIFFKNAGNGKIPRVLMNHFPYPSYVP------NHYA 203
              |.|.......|:...||.||..|....|           .:..||..:.:...      ....
 Frog   161 CAPGSQACYPTYYWSRQFLSLQASIDSAII-----------ELTSNHSVWDNMASVVTVRMKSTV 214

  Fly   204 ESAKAMTYMTLISFFLP-CITIAKYV----VAEKERHQKAVLTAMGFSNSIHWLAWYTKSMLLLL 263
            .|.:...::....|.:| |.....|:    :..:.|..:.:|..|...:...||:|    .||.|
 Frog   215 ASFRQYFHIGTFIFLMPMCYVSLMYLLSLYITRERREMRELLKMMRLKDLAFWLSW----GLLYL 275

  Fly   264 LCLLIMISIFSI---GLIYEFSSLVCLMTIFLVYIHSLVLFAFFISSFF-SRSLSAVVATILMYF 324
            ..:||:.::.::   ..::..||...:|.:|:.|..:|:.|.|.:|:.| |...:|:....:..|
 Frog   276 FYILILANLMTLVTKAFVFVQSSYGIIMFLFVFYGIALMSFTFMLSALFRSPRATAIAGFFITLF 340

  Fly   325 STALPFLIVG-------AENSSVAAQTAASIGLNSALFYILDSVAVMEMQSVGAQWYTIDNTASS 382
            .:||..:::.       |...|:..|.|.::||..::.  ::|    ::|.|    |..|....|
 Frog   341 LSALGLVLLRKDFPQALAVLLSIFPQFAFAVGLTESVH--MES----DLQGV----YFSDMAGDS 395

  Fly   383 GYKLSIVGYMLIMISISWIELLICLYIEAVRTGEFEVPQPWSYPFQRRYWCPLRYGSSVFHQGAL 447
            .:.||.. ..|.:.||.::.|  .||.|.|...:..:.....:..:..||...:          |
 Frog   396 SHVLSSF-ISLALDSIFYMGL--TLYFEKVLADKHGLKYEPFFFMKSSYWSKKK----------L 447

  Fly   448 LPL------AGKNSEGNLPAAHPTRQPIIYLDDRTQENFQRV--NISKKIGIEVRSLSKTF--GF 502
            .|:      :|::|.|                    |.|:||  ::..|..|.:..:.|.:  ..
 Frog   448 SPVLTQTEDSGESSMG--------------------EFFERVPIDLHGKEAIRINKVMKKYCDQD 492

  Fly   503 RNV--VKDLFFNVYENEITALVGHKGSGKTTIIMMLCGILQPTTGTVLINGYDI--VTEAKVAKS 563
            :|:  ::.|..|:||.:||||:||.|:||||::.:|.|:...:.|:..:..|.:  :...:..|.
 Frog   493 KNIEALRGLDLNIYEGQITALLGHSGAGKTTLLNILSGLCPASDGSATVYSYKLSDMQHLEEIKK 557

  Fly   564 SLGICPQHSVIFKGMSARDHIYFFSRVKGYNKTEAMMESNIYISKLGLVDSQKWDAMRLSPGNQR 628
            ..|.|||..|.|..::.::::..|:::||..:.:...:....:|.|.:.|.:..:|..||.|.:|
 Frog   558 RTGFCPQSDVKFNPLTVKENLTVFAKIKGIPRKQIKHKVQKVLSDLQMNDIENVEADNLSGGQRR 622

  Fly   629 RLSLACALCAGSKVILCDEPSSGLDPIGRHELMRFLQKEKHGRTILMTTQQLEEGEILADRIAIM 693
            :|:|..||....:|:|.|||::||||..||.:...|::.|..|..|.:||.::|.:|||||.|::
 Frog   623 KLTLGIALLGDPQVLLLDEPTAGLDPCSRHHIWTILKENKADRVTLFSTQFMDEADILADRKAVI 687

  Fly   694 NDGQILCYGTLGYLKQLPFTSYTLSCQMAPNSKADNLTDLVRLYMTTTTSPVFHGVDVSYKLPRS 758
            ::|::.|.|:..:||:.....|.|..|::|....:.:|.:::.::........:..:::|.||..
 Frog   688 SNGRLKCVGSSLFLKRKWGIGYHLRMQVSPTCDVELMTSIIKQHVPDAKLTAQNEEELTYTLPFE 752

  Fly   759 QIDRFPEFFQQLEENKKSLNVVSFGVSDSTLDGIYLSLDYGQGSSRLRGGADPGVNDKVEFGVQT 823
            .:|.||:.|..| :.:...::|::|||.:|||.::|.|: |:|..           :|.::||.:
 Frog   753 NMDAFPDLFLHL-DGQVGNSIVNYGVSMTTLDDVFLKLE-GEGEI-----------EKGDYGVFS 804

  Fly   824 DKAIRTKDR------ANNSLVRYQHQVDPPNETILNTKTPINPIEIWRPIDREKGSCMAQWQAMF 882
            ..:...:|:      ..:||:...   |..:.|       ::.:.:|    |::...:|:.:.:.
 Frog   805 PDSGAPEDKDCFSAGMEDSLLLMS---DSGSAT-------LSGLSLW----RQQVLAIARVRLLK 855

  Fly   883 IKKKNYTASRALIFILILIIPLFYYIIVLGTAASEKCAHRTDKQPVLPLSLDYYSYDDMIILLEV 947
            :|..:.|....||.:.:.|||:....||:      |..|:.....:.| ||.:...:|.......
 Frog   856 LKHDSKTFRSILILLALFIIPIIMTTIVI------KIFHKVITWELTP-SLYFQHPEDRFHRYYT 913

  Fly   948 DKQLYKSEG---EAYVQLVKEP-ATVESVDSIFSHLLKAPPIIRRDIKRKYVCGASFNNAST--- 1005
            |.|:|.:.|   |.::..:||. ..|:.|:..:            |::..:..||...:.:|   
 Frog   914 DLQIYNNTGSSIEDFLGALKEQNIAVQVVNGEY------------DMETTFYRGAIEVSQATKGY 966

  Fly  1006 -ITAWFNSDAFEHSAPIALNLVYNALGKAVFEDQDFSILVNRGDLHDFIWLNNASSMRRRYKRQN 1069
             .|...|..| :::.|:.:|::.|||           :::.....|..:|              |
 Frog   967 GFTIVGNPKA-QNALPVLVNIISNAL-----------LMIFNSTEHIRVW--------------N 1005

  Fly  1070 DPDYTDYSDYEIQEYDVVVKPNSSSTSGQHNKSNPGDDNIITVQMSIIEAASTLYNEKGKRKQLF 1134
            .|    .::|.:::::.|                                  |.|:         
 Frog  1006 HP----VTEYLVEDFESV----------------------------------TFYS--------- 1023

  Fly  1135 GTLIIITAY-IALCLSIFSIFVTKERVEHFKMQQEIYGVTLFYFWSTHFVGDFLIYAIYMGALTI 1198
            |.::::.|. :|...::.||   ::|....:.|..|.|:....:|....:.|..:|.|.:..:..
 Frog  1024 GFMLLLFASGLAPHFAMSSI---EDRRIKARTQLRISGIFPSAYWFGQALVDVPLYWILLFLMVA 1085

  Fly  1199 AIYHFT--IWYQVVVMLLLI------GFACLPFVYLCSLLFSLPNIAFAGIFAILVMTGGMLFSF 1255
            .::.|.  :.:..|..::||      |.|.:.:||:.|.:|........|.....|::     :|
 Frog  1086 ILFSFNSQVIFSFVPAIILITGVIGYGAAVVLYVYVISFVFGRGKSHHDGWSIFFVIS-----AF 1145

  Fly  1256 MYMLTLITDVNFT-----TVFAILPMYVGTF-GLFKCLAWREYCNREVLPPIEELDCKFGNCNVF 1314
            :.|:.|  ||..|     |.|.:||  ..|. |:.:|:....: :|..|.. |.|          
 Frog  1146 IPMILL--DVVSTYAVGITFFLLLP--ASTLSGIIRCIDVYHF-DRSTLED-EHL---------- 1194

  Fly  1315 CACKPERTWMEVWLLMVHCLVWFIFLWFSN--FGY-----EIGYRFKPKLSNRIWHNNEKHI--- 1369
                     :.::...:|.:::.:.||...  ||.     .:.||.|.:       .|::.:   
 Frog  1195 ---------LYLFFPFLHIVIFSVILWVLERVFGMRSLKTNLFYRKKVQ-------KNQEELGED 1243

  Fly  1370 ---RVLDEERRVGLIPKYEH-EDYP-IIVDQVTKNY----------CRAKNAVQLVSFAIRPGDT 1419
               .||.|..||.:.....: |:.| ||||.:.|.|          ...|.|.:.:||.:|.|:.
 Frog  1244 TDEEVLAERERVKMSSTTNNMEEKPIIIVDSLRKEYKVKKGKSFFKKNKKAATKNISFCVRKGEV 1308

  Fly  1420 FGLLGAQGAGKTSIFQMIAGETSMSHGNIYVRGHSLREHRNA---AKMEVGFCPQGDNAPKYLTG 1481
            .||||..|||||:...|:|||...:.|.:.:.|....:.:|:   ....:|:|||.:.....||.
 Frog  1309 LGLLGPNGAGKTTSIYMLAGEIRPTAGEVLLCGTDPDKSQNSQYDPTGSLGYCPQDNPLWPNLTV 1373

  Fly  1482 RQLLRIHCLLHGVPKDH----IKAVSEQMAIEFNFKDQLDRPIHTYSGGKKRKLNIALA-IDSGS 1541
            :|.|.|:..:.|:.|..    ||.|||.:.:    |:.|::.....|.|..||:..|:: :.:.:
 Frog  1374 KQHLEIYAAVKGLKKKDAETAIKRVSEALEL----KEHLEKAARKLSAGVSRKVCFAISMLGNPN 1434

  Fly  1542 VLCLDDTNGSVDHATQRFIWRKL-EAVKRSGRPVLLTTQSMEEANAVCSRVAFLVAGEMMFIGSL 1605
            ::.||:.:..:|...|:.:||.: .|.:...|..:|||..||||.|||.|||.:|:|::..|||:
 Frog  1435 IVLLDEPSTGLDPKGQQRLWRAIRSAFRNKDRGAILTTHYMEEAEAVCDRVAIMVSGKLRCIGSI 1499

  Fly  1606 QQVRSEVSNTIVIRLRVNPSDGKLKRRFQQLIADMAELFPLATLHEALETCLIYHINI-NVTTLA 1669
            ||::|:.....::.::|..|:     :..|:..::.::||.|...:...:.|:|.|.: ||.:|:
 Frog  1500 QQLKSKFGKGYLLEIKVKNSN-----QVDQIHNEIIQIFPHAARQDRFSSLLVYKIPVENVQSLS 1559

  Fly  1670 NLFYQMEKIRNEGLLEDYSITQVSLDEIYRILNDEEDPNLVDLDST 1715
            ..|..:|:.:....:|:||.:|.:|.:::..|..|::....|..||
 Frog  1560 KAFLDLEEAKRAYNIEEYSFSQPTLTQVFIELTKEQEREDFDSAST 1605

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31213NP_732473.2 rim_protein <118..1698 CDD:130324 391/1683 (23%)
abca8XP_031749971.1 rim_protein <225..1601 CDD:130324 375/1590 (24%)

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