DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG31213 and CG6052

DIOPT Version :10

Sequence 1:NP_732473.2 Gene:CG31213 / 42382 FlyBaseID:FBgn0051213 Length:1809 Species:Drosophila melanogaster
Sequence 2:NP_649002.3 Gene:CG6052 / 39971 FlyBaseID:FBgn0036747 Length:1725 Species:Drosophila melanogaster


Alignment Length:1875 Identity:515/1875 - (27%)
Similarity:854/1875 - (45%) Gaps:382/1875 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 KYRLLLWKDIKLQLTNWVELVMIIFLSALMPIFFSIGTKVAKSIFPPD----------------I 58
            |.:||:||:..||   |.:.:.|:| :.::|:.|.....|.:.|..|:                :
  Fly    21 KLKLLMWKNWILQ---WNQKMQIVF-ALVLPVLFLCLILVLRIIVLPEKMDEIRYPTVSISDLNL 81

  Fly    59 EMEKSPGPKSV---NTSLFVD---LYFTPNNGILEQLITQLANISEFKSVEVFDTNSELYLQLM- 116
            .|...|....:   |.||.:.   |.:||||.|...::...|..........:||...:...:: 
  Fly    82 YMRMVPLGNRILHENGSLNIPRNFLCYTPNNPINSAIVGATAIRLRLLGTRAYDTALHMEQDMVL 146

  Fly   117 --------------INRNAIG--------IAFPSE-----------W--------YDIKSCPEVL 140
                          :|.|..|        :.||||           |        ||.......|
  Fly   147 HNFLAGVQFEDNENVNTNDAGYPLNLNYSLRFPSELRTMQGPIIDTWRTSRLFLSYDTSGSRNRL 211

  Fly   141 NLTIFMPLSIKRKDFKYFESGFLLLQERISKIFI-FFKNAGNGKIPRVLMNHFPYPSYVPNHYAE 204
            :....:|:.       |...|||.:|..::..:: ......:..||.:.:..|||.:|..:....
  Fly   212 DNDGGVPVG-------YIREGFLPIQHALTMSWLALASGVTDTGIPAIHLQRFPYRAYTYDQLLS 269

  Fly   205 SAK-AMTYMTLISFFLPCITIAKYVVAEKERHQKAVLTAMGFSNSIHWLAWYTKSMLLLLLCL-- 266
            ..: .:.::.|:||..|..|:.|||.:|||...|.::..:|..|.:||:||:.||.::|:|.:  
  Fly   270 GLRQLLPFVILLSFIYPASTVTKYVTSEKELQLKEIMKLIGVHNWLHWVAWFVKSYIMLMLVVFL 334

  Fly   267 ---LIMISIFSIGLIYEFSSLVCLMTIFLVYIHSLVLFAFFISSFFSRSLSAVVATILMYFSTAL 328
               |||:..::...:..|||.|.::.....|:.:.|...|.::..||::.:|.....:.:|.|.:
  Fly   335 IMSLIMVKFYASVAVLTFSSWVPVLLFLHTYVVTSVCLCFMLAVLFSKASTASAVAAIFWFLTYI 399

  Fly   329 P--FLIVGAENSSVAAQTAAS-IGLNSALFYILDSVAVMEMQSVGAQWYTIDNTASSGYKLSIVG 390
            |  |.....|..|:.::...| |..||||.:.:..:.:.|....|..|..:.:..|:...|::. 
  Fly   400 PYSFGYYYYERLSLMSKLLISLIFSNSALGFGIHVIVMWEGTGEGITWRNMFHPVSTDDSLTLF- 463

  Fly   391 YMLIMISISWIELL-ICLYIEAVRTGEFEVPQPWSYPFQRRYWCPLRYGSSVFHQGALLPLAGKN 454
            |:::.:|...|..: ||||:|.|..||:.||:.|::...:.||  .:|..|:             
  Fly   464 YIIMTMSFGSIMFISICLYVEQVFPGEYGVPRRWNFMCHKNYW--RQYVPSL------------- 513

  Fly   455 SEGNLPAAHPTRQPIIYLDDRTQENFQRVNISKKIGIEVRSLSKTFGFRNVVKDLFFNVYENEIT 519
               |:.   |:.|.|::...:.:.    ...::::||::.:|.|.:|....||.:...::.||||
  Fly   514 ---NIV---PSFQTILHGSAKAKS----CRRAREVGIQLFNLQKNYGKLKAVKGISLKMHRNEIT 568

  Fly   520 ALVGHKGSGKTTIIMMLCGILQPTTGTVLINGYDIVTEAKVAKSSLGICPQHSVIFKGMSARDHI 584
            .|:||.|:||||.|.|:.||::||:||.::|||||.|....|:.|||||||::::||.||.||||
  Fly   569 VLLGHNGAGKTTTINMITGIVKPTSGTAIVNGYDIRTHLAKARESLGICPQNNILFKEMSVRDHI 633

  Fly   585 YFFSRVKGYNKTEAMMESNI--YISKLGLVDSQKWDAMRLSPGNQRRLSLACALCAGSKVILCDE 647
            .|||::||...|:| :|:.:  |::.|.|.|.....|..||.|.:|:|||.||||..:||:||||
  Fly   634 IFFSKLKGIRGTKA-VENEVGKYMTMLKLQDKSYVAAKNLSGGMKRKLSLCCALCGNAKVVLCDE 697

  Fly   648 PSSGLDPIGRHELMRFLQKEKHGRTILMTTQQLEEGEILADRIAIMNDGQILCYGTLGYLKQLPF 712
            ||||:|..||..|...||.||.|||||:||..::|.::|.|||||:::|::.|.||..|||:...
  Fly   698 PSSGIDAAGRRSLWDLLQSEKDGRTILLTTHYMDEADVLGDRIAILSEGKLQCQGTSFYLKKRFG 762

  Fly   713 TSYTLSCQMAPNSKADNLTDLVRLYMTTTTSPVFHGVDVSYKLPRSQIDRFPEFFQQLEENKKSL 777
            |.|.|.|.|........:|.|:|.|:.........|.:::|:||.....:|.|..|.|:|....|
  Fly   763 TGYLLVCIMQSGCDVGAVTQLIRKYVPPIKPERVLGTELTYRLPTEYSKKFAELLQDLDEKCAQL 827

  Fly   778 NVVSFGVSDSTLDGIYLSLDYGQGSSRLRGGAD-PGVNDKVEFGVQTDKAIRTKDRANNSLVRYQ 841
            .:|.:|:|.:||:.::::::   ...|::|||: |.|:..::|                      
  Fly   828 QLVGYGLSGATLEDVFMAVN---TDKRVQGGAEGPPVDGSIDF---------------------- 867

  Fly   842 HQVDPPNETILNTKTPINPIEIWRPIDREK---GSCMAQWQAMFIKKKNYTASRALIFILI-LII 902
                  .|.:.::||            |||   ..|...|||:|: ||.||.:|....:.| |::
  Fly   868 ------KELVFDSKT------------REKRRIRRCFMFWQALFL-KKFYTTTRNYWLLGIQLVL 913

  Fly   903 PLFYYIIVLGTAASEKCAHRTDKQPVLPLSLDYYSYDDMIILLEVDKQLYKSEGEAYVQLVKEPA 967
            |:....:.:..:...:..:   :.|.:|:|::.||                   .|||  |.|..
  Fly   914 PIAVMALTILNSRGGRIYY---ELPAMPISINQYS-------------------SAYV--VLEDN 954

  Fly   968 TVESVDSI-------FSHLLKAPPIIRR-DIK-RKYVCGASFNNASTI---------------TA 1008
            |.:...|:       ..|..:...::|. |:| ..|:.....|::..|               ..
  Fly   955 TTDKTSSLADAYSKHLEHYARRCTLLRTGDLKFEDYILSHDVNHSRRIDFHFLAGLTVSENNFIV 1019

  Fly  1009 WFNSDAFEHSAPIALNLVYNALGKAVFEDQDFSILVNRGDLHDFIWLNNASSMRRRYKRQNDPDY 1073
            |.|:... |:||:.|||::|||...:. .||.|..|.                       |:|  
  Fly  1020 WLNNKPL-HTAPLTLNLLHNALAIKLL-GQDASTYVT-----------------------NEP-- 1057

  Fly  1074 TDYSDYEIQEYDVVVKPNSSSTSGQHNKSNPGDDNIITVQMSIIEAASTLYNEKGKRKQLFGTLI 1138
            ..|||                                        ...||...||   |:.|..|
  Fly  1058 LPYSD----------------------------------------DTRTLRLNKG---QVLGAEI 1079

  Fly  1139 IITAYIALCL--SIFSIFVTKERVEHFKMQQEIYGVTLFYFWSTHFVGDFLIYAI--YMGALTIA 1199
            .|...:.:|.  :.::|.:.:||....|:.|.:.||.:..:|::|.|.|:|::.:  ....||||
  Fly  1080 SINLSLTMCFITAFYAIPIIRERETRAKLLQFLSGVDVCAYWTSHIVWDYLVFVLSALSSILTIA 1144

  Fly  1200 IYHFTIWY-------QVVVMLLLIGFACLPFVYLCSLLFSLPNIAFAGIFAILVMTGGMLFSFMY 1257
            .:. .|.|       :...|||:.||..:...|..|..||.....|..|..|..:.|..|| .|:
  Fly  1145 AFK-EIGYITPLDLSRYFYMLLIFGFPGIMLSYAASGCFSDAATGFTRISIINTLMGTGLF-LMF 1207

  Fly  1258 MLTL------ITDV--NFTTVFAILPMY---VGTFGLFKCLAWREYCN----REVLPPIEELDCK 1307
            | ||      :.||  .....|.:.|.|   ..|..:......|..|:    |: ||  ::|.|:
  Fly  1208 M-TLNFEAFQLKDVAEKLAWYFRLSPHYSLASSTHSIHIGYNIRRGCSIGGIRK-LP--KQLRCR 1268

  Fly  1308 FGNCNVFCACKPERTWMEVWLLMVHCLVWFIFLWFSNFGYEIGYRFK------PKLSNRIWHNNE 1366
              |..:.|.......|.:..:|:.  :.:.|.|..:.|...:.:..|      .||.|  ..:..
  Fly  1269 --NVPICCDIPGYYGWRKPGVLVE--ITYMIMLGSTLFLLIVMHDAKVCNLIAEKLGN--CFSKR 1327

  Fly  1367 KHIR---------VLDEERRVGLIPKYEHEDYPIIVDQVTKNYCRAKNAVQLVSFAIRPGDTFGL 1422
            |.:.         |:.|:|.|..:.....:|.|::|.:::|.| |:|.||:.:||.:...:.|||
  Fly  1328 KRVEGGTSIENDSVVAEQRVVREMINSGRKDVPLLVYKISKRY-RSKLAVKAISFHVPHAECFGL 1391

  Fly  1423 LGAQGAGKTSIFQMIAGETSMSHGNIYVRGHSLREHRNAAKMEVGFCPQGDNAPKYLTGRQLLRI 1487
            ||..||||||.|:|:||:..::.|..|:.|.::..|:...|  :|:|||.|...:.||||:.|.|
  Fly  1392 LGINGAGKTSTFKMLAGDEKITSGEAYIDGTNISTHKVYRK--IGYCPQFDALFEDLTGRETLNI 1454

  Fly  1488 HCLLHGVPKDHIKAVSEQMAIEFNFKDQLDRPIHTYSGGKKRKLNIALAI-DSGSVLCLDDTNGS 1551
            :|||.||.:.|:..:...:||.|.|...:|:....||||.:|||:.|::: .:.|||.||:....
  Fly  1455 YCLLRGVQRRHVTPICWGLAISFGFAKHMDKQTKHYSGGNRRKLSTAISVLGNPSVLYLDEPTSG 1519

  Fly  1552 VDHATQRFIWRKLEAVKRSGRPVLLTTQSMEEANAVCSRVAFLVAGEMMFIGSLQQVRSEVSNTI 1616
            :|.|.:|.:|:.:..::.:|:.::||:.||:|..|:|||:|.:|.||...:||:|.::::.|..:
  Fly  1520 MDPAARRQLWQIIGLIRTAGKSIVLTSHSMDECEALCSRLAIMVDGEFKCLGSVQSLKNQFSKGL 1584

  Fly  1617 VIRLRVNPSDGKLKRRFQQLIAD-------------------MAEL------------------- 1643
            :::::|...    |:.||:::.|                   ||.:                   
  Fly  1585 ILKVKVKHK----KKTFQRVVEDSSSSNDKKSISETDLKFLQMASVMESSQADRILKVNRFISKE 1645

  Fly  1644 FPLATLHEALETCLIYHININVTTLANLFYQMEKIRNEGLLEDYSITQVSLDEIY 1698
            .|.|.|.|.....:.|:|. :..||:.:|..:|...::..:|||.|.|..|:||:
  Fly  1646 IPDAELKEEYNGLITYYIP-HSKTLSKIFQLLETNSHKLNIEDYLIMQTRLEEIF 1699

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31213NP_732473.2 rim_protein <118..1698 CDD:130324 485/1728 (28%)
CG6052NP_649002.3 rim_protein 21..>54 CDD:130324 12/36 (33%)
rim_protein <149..1709 CDD:130324 486/1743 (28%)

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