Sequence 1: | NP_001262752.1 | Gene: | CG31213 / 42382 | FlyBaseID: | FBgn0051213 | Length: | 1809 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_038965774.1 | Gene: | Abca1 / 313210 | RGDID: | 631344 | Length: | 2263 | Species: | Rattus norvegicus |
Alignment Length: | 2035 | Identity: | 481/2035 - (23%) |
---|---|---|---|
Similarity: | 830/2035 - (40%) | Gaps: | 520/2035 - (25%) |
- Green bases have known domain annotations that are detailed below.
Fly 20 KLQLTNWVELVMIIFLSALMPIFFSIGTKVAKSIFPPDIEMEKSPGPKSVNTSLFV--DLYFTPN 82
Fly 83 NGILEQLITQLANISEFKSVEVFDTNSELY---LQLMINRNA-IGIAFPSEWYDIKSCPEVLNLT 143
Fly 144 IFMPL-SIKR------------------KDFKYFESGFLLLQERISKIFIFFKNAGNGKIPRVLM 189
Fly 190 NHFPYPSYVPNHYAE-SAKAMTYMTLISFFLPCITIAKYVVAEKERHQKAVLTAMGFSNSIHWLA 253
Fly 254 WYTKSMLLLLLCLLIMISIFSIGLIYEFSSLVCLMTIFLVYIHSLVLFAFFISSFFSRSLSAVVA 318
Fly 319 TILMYFSTALPFLIVGAENSSV--AAQTAASIGLNSALFYILDSVAVMEMQSVGAQWYTIDNTAS 381
Fly 382 S-----GYKLSIVGYMLIMISISWIELLICLYIEAVRTGEFEVPQPWSYPFQRRYWCPLRYGSSV 441
Fly 442 ---FHQGALLPLAGKNSEGNLPAAHPTRQPIIYLDDRTQENFQRVNISKKIGIEVRSLSKTF--G 501
Fly 502 FRNVVKDLFFNVYENEITALVGHKGSGKTTIIMMLCGILQPTTGTVLINGYDIVTEAKVAKSSLG 566
Fly 567 ICPQHSVIFKGMSARDHIYFFSRVKGYNKTEAMMESNIYISKLGLVDSQ-KWDAMRLSPGNQRRL 630
Fly 631 SLACALCAGSKVILCDEPSSGLDPIGRHELMRFLQKEKHGRTILMTTQQLEEGEILADRIAIMND 695
Fly 696 GQILCYGTLGYLKQLPFTSY---------------------TLSC--QMAPNSKA---------- 727
Fly 728 -----------DNLTDLVRLYMTTTTSPVFHGVDVSYKLP--RSQIDRFPEFFQQLEENKKSLNV 779
Fly 780 VSFGVSDSTLDGIYLSLDYGQG-SSRLRGGADPGVNDKVEFGVQTDKAI----RTKDRANNSLVR 839
Fly 840 YQHQVDPPNETILNTKTPINPIEIWRPIDRE---------KGSCMAQ-------------WQAMF 882
Fly 883 I---KKKNYTASRAL--IFILI-----LIIPLFYYIIVLGTAASEKCAHRTDKQPVLPLSLDYYS 937
Fly 938 YDDMIILLEVDKQLYKSEGEAYVQLVKEPA----------------------------------- 967
Fly 968 ------TVE--------SVDSIFSHLLKAPP---------------------------------- 984
Fly 985 --IIRRDIKRK----------YVCGAS----------FNNA------------------------ 1003
Fly 1004 ---------STITAWFNSDAFEHSAPIALNLVYNALGKAVFEDQDFSILVNRGDLHDFIWLNNAS 1059
Fly 1060 SMRRRYKRQNDPDYTDYSDYEIQEYDVVVKPNSSSTSGQHNKSNPGDDNIITVQMSIIEAASTLY 1124
Fly 1125 NEKGKRKQLFGTLIIITAYIALCLSI----FSIFVTKERVEHFKMQQEIYGVTLFYFWSTHFVGD 1185
Fly 1186 FLIYAIYMGALTIAIYHFTIWYQ-----------VVVMLLLIGFACLPFVYLCSLLFSLPNIAFA 1239
Fly 1240 GIFAILVMTG--GMLFSFMYMLTLIT-----DVN--FTTVFAILPMYVGTFGLFKCLAWREYCNR 1295
Fly 1296 EVLPPIEELDCKFGNCNVFCACKPERTWMEVWLLMVHCLVWFIFLWFSNFGYEIGYRF--KPK-L 1357
Fly 1358 SNRIWHNNEKHIRVLDEERRV----GLIPKYEHEDYPIIVDQVTKNYCR-AKNAVQLVSFAIRPG 1417
Fly 1418 DTFGLLGAQGAGKTSIFQMIAGETSMSHGNIYVRGHSLREHRNAAKMEVGFCPQGDNAPKYLTGR 1482
Fly 1483 QLLRIHCLLHGVPKDHIKAVSEQMAIEFNFKDQLDRPIHTYSGGKKRKLNIALAIDSG-SVLCLD 1546
Fly 1547 DTNGSVDHATQRFIWRKLEAVKRSGRPVLLTTQSMEEANAVCSRVAFLVAGEMMFIGSLQQVRSE 1611
Fly 1612 VSN--TIVIRLRVNPSDGKLKRRFQQLIADMAELFPLATLHEALETCLIYHININVTTLANLFYQ 1674
Fly 1675 MEKIRNEGLLEDYSITQVSLDEIY-RILNDE-EDPNLVDLDSTHNSEVLEDIRDTTRDTTRGTTR 1737
Fly 1738 DTNLVSDEGIQKEKVKRKKV 1757 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
CG31213 | NP_001262752.1 | ABC2_membrane_3 | 32..>295 | CDD:289468 | 62/288 (22%) |
ABC_subfamily_A | 491..708 | CDD:213230 | 85/219 (39%) | ||
drrA | 498..796 | CDD:130256 | 110/346 (32%) | ||
ABC2_membrane_3 | <1132..1285 | CDD:289468 | 43/176 (24%) | ||
CcmA | 1391..1672 | CDD:224054 | 96/284 (34%) | ||
ABC_subfamily_A | 1391..1609 | CDD:213230 | 80/219 (37%) | ||
Abca1 | XP_038965774.1 | rim_protein | 1..2238 | CDD:130324 | 472/1992 (24%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 1 | 1.010 | - | - | QHG53524 | |
OrthoDB | 1 | 1.010 | - | - | D131191at2759 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0000051 | |
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
5 | 4.930 |