Sequence 1: | NP_001262752.1 | Gene: | CG31213 / 42382 | FlyBaseID: | FBgn0051213 | Length: | 1809 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001101191.1 | Gene: | Abca4 / 310836 | RGDID: | 1309445 | Length: | 2290 | Species: | Rattus norvegicus |
Alignment Length: | 1994 | Identity: | 473/1994 - (23%) |
---|---|---|---|
Similarity: | 806/1994 - (40%) | Gaps: | 462/1994 - (23%) |
- Green bases have known domain annotations that are detailed below.
Fly 2 NRNLTY--CQKYRLLL--WKDIKLQLTNWVELVMIIFLSALMPIFFSIGTKVA---KSIFPPDIE 59
Fly 60 --MEKSPGPKSVNTSLFVDLYFTPNN------------------GILEQLITQLAN-------IS 97
Fly 98 EFKSV--EVFDTNSELYLQLMINRNAIGIAFPSEWYDIKSCPEVLNLTIFMPLSIKRK------- 153
Fly 154 ------------DFKYFESGFLLLQERISKIFIFFKNAGNGKIPRVLMNHFPYPSYVPNHYAESA 206
Fly 207 KAMTYMTLISFFLPCITI----------AKYVVAEKERHQKAVLTAMGFSNSIHWLAWYTKSMLL 261
Fly 262 LLLCLLIMISIFSIGLIYEFSSLVCLMTIFLVYIHSLVLFAFFISSFFSRSLSAVVATILMYFST 326
Fly 327 ALPFLIVGAENSSVAAQTAASIGLNS--ALFYILDSVAVMEMQSVGAQWYTIDNTASSGYKLSIV 389
Fly 390 GYMLIMISISWIELLICLYIEAVRTGEFEVPQPWSYPFQRRYWCPLRYGSSVFHQGALLPLAGKN 454
Fly 455 SEGNLPAAHPTRQPIIYLDDRTQENFQRVNISKKIGIEVRSLSKTF--GFRNVVKDLFFNVYENE 517
Fly 518 ITALVGHKGSGKTTIIMMLCGILQPTTGTVLINGYDIVTEAKVAKSSLGICPQHSVIFKGMSARD 582
Fly 583 HIYFFSRVKGYNKTEAMMESNIYISKLGLVDSQKWDAMRLSPGNQRRLSLACALCAGSKVILCDE 647
Fly 648 PSSGLDPIGRHELMRFLQKEKHGRTILMTTQQLEEGEILADRIAIMNDGQILCYGTLGYLKQLPF 712
Fly 713 TSYTLS--------------CQMAPN-----------SKADNLT-------DLVRLYMTTTTSPV 745
Fly 746 FH-----------GVDVSYKLPRSQIDR--FPEFFQQLEENKKSLNVVSFGVSDSTLDGIYLSL- 796
Fly 797 DYGQGSSRLRGGAD-----PGVNDKVEFGVQTDKAIRTKDRANNSLVRYQHQVDPPNETILNTKT 856
Fly 857 PINPIEIWRPIDREKGSCMAQWQAMFIKKKNYTASRALIFILILIIPLFYYIIVL---------- 911
Fly 912 ---------------------------------------------------------GTAASEK- 918
Fly 919 ------CAHRTDKQ--------PVLPLSLDYYSYDDMIILLEVDK--------QLYKSEGEAYVQ 961
Fly 962 LVKEPATVESVDSIFSHLLKA-PPIIRRDIKRKYVCGASFNNASTITAWFNSDAFE--------H 1017
Fly 1018 SAPIA----------LNLVYNALGKAVFEDQDFSILVNRGDLHDF-----------IWLNNA--- 1058
Fly 1059 -----------SSMRRRYKRQNDPDYTDYSDYEIQEYDVVVKPNSSSTSGQHNKSNPGDDNIITV 1112
Fly 1113 QMSIIEAASTLYNEKGKRKQLFGTLIIITAYIALCL--------SIFSIFVTKERVEHFKMQQEI 1169
Fly 1170 YGVTLFYFWSTHFVGDFLIYAIYMGALTIAIYHFTIWYQ------------VVVMLLLIGFACLP 1222
Fly 1223 FVYLCSLLFSLPNIAFAGIFAILVMTGGMLFSFMYMLTLITDVNFTTVF-AILPMYVGTFGLFKC 1286
Fly 1287 LAWREYCNREVLPPIEELDCKFG---NCNVFCACKPERTW----MEVWLLMVHCLVWFIFLWFSN 1344
Fly 1345 FGYEIGYRFKPKLSNRIWHNNEKHIRVLDE-----ERRVGLIPKYEHEDYPIIVDQVTKNYCRAK 1404
Fly 1405 N-AVQLVSFAIRPGDTFGLLGAQGAGKTSIFQMIAGETSMSHGNIYVRGHSLREHRNAAKMEVGF 1468
Fly 1469 CPQGDNAPKYLTGRQLLRIHCLLHGVPKDHIKAVSEQMAIEFNFKDQLDRPIHTYSGGKKRKLNI 1533
Fly 1534 ALAIDS-GSVLCLDDTNGSVDHATQRFIWRKLEAVKRSGRPVLLTTQSMEEANAVCSRVAFLVAG 1597
Fly 1598 EMMFIGSLQQVRSEVSNTIVIRLRV-NPSDGKLKRRFQQLIADMAEL-------FPLATLHEALE 1654
Fly 1655 TCLIYHININVTTLANLFYQMEKIRNEGLLEDYSITQVSLDEIY 1698 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
CG31213 | NP_001262752.1 | ABC2_membrane_3 | 32..>295 | CDD:289468 | 66/323 (20%) |
ABC_subfamily_A | 491..708 | CDD:213230 | 92/218 (42%) | ||
drrA | 498..796 | CDD:130256 | 119/344 (35%) | ||
ABC2_membrane_3 | <1132..1285 | CDD:289468 | 43/173 (25%) | ||
CcmA | 1391..1672 | CDD:224054 | 87/290 (30%) | ||
ABC_subfamily_A | 1391..1609 | CDD:213230 | 77/219 (35%) | ||
Abca4 | NP_001101191.1 | rim_protein | 1..2249 | CDD:130324 | 473/1994 (24%) |
ABC_subfamily_A | 907..1126 | CDD:213230 | 92/218 (42%) | ||
ABC_subfamily_A | 1915..2135 | CDD:213230 | 77/219 (35%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C166342251 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 1 | 1.010 | - | - | QHG53524 | |
OrthoDB | 1 | 1.010 | - | - | D131191at2759 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0000051 | |
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
6 | 5.860 |