DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG31213 and Abcg4

DIOPT Version :9

Sequence 1:NP_001262752.1 Gene:CG31213 / 42382 FlyBaseID:FBgn0051213 Length:1809 Species:Drosophila melanogaster
Sequence 2:NP_001100286.2 Gene:Abcg4 / 300664 RGDID:1305840 Length:646 Species:Rattus norvegicus


Alignment Length:275 Identity:66/275 - (24%)
Similarity:127/275 - (46%) Gaps:42/275 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   468 PIIYLDDRTQENF----QRV-NISKKIGIEVRSLSKTF-----------GFRNVVKDLFFNVYEN 516
            |::....:..||.    ||. ::.|:..:::..:..::           |::.::|.|.......
  Rat    31 PVLTTHLKKVENHITEAQRFSHLPKRSAVDIEFVELSYSVREGPCWRKRGYKTLLKCLSGKFCRR 95

  Fly   517 EITALVGHKGSGKTTIIMMLCGILQP-TTGTVLING--YDIVTEAKVAKSSLGIC--PQHSVIFK 576
            |:..::|..|:||:|.:.:|.|..:. ..|.:|:||  .|:.|..|::      |  .|..::..
  Rat    96 ELIGIMGPSGAGKSTFMNILAGYRESGMKGQILVNGRPRDLRTFRKMS------CYIMQDDMLLP 154

  Fly   577 GMSARDHIYFFSRVKGYNKTEAMME--SNIYISKLGLVDSQKWDAMRLSPGNQRRLSLACALCAG 639
            .::..:.:...:.:|...|.|...|  :.| ::.|||:.........||.|.::||::|..|...
  Rat   155 HLTVLEAMMVSANLKLSEKQEVKKELVTEI-LTALGLMSCSHTRTALLSGGQRKRLAIALELVNN 218

  Fly   640 SKVILCDEPSSGLDPIGRHELMRFLQKEKH-GRTILMTTQQ----LEEGEILADRIAIMNDGQIL 699
            ..|:..|||:||||.....:::..::...| |||::.|..|    |.|   :.|::.|::.||.:
  Rat   219 PPVMFFDEPTSGLDSASCFQVVSLMKSLAHGGRTVICTIHQPSAKLFE---MFDKLYILSQGQCI 280

  Fly   700 CYGT----LGYLKQL 710
            ..|.    :.|||.|
  Rat   281 FKGVVTNLIPYLKGL 295

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31213NP_001262752.1 ABC2_membrane_3 32..>295 CDD:289468
ABC_subfamily_A 491..708 CDD:213230 57/243 (23%)
drrA 498..796 CDD:130256 60/240 (25%)
ABC2_membrane_3 <1132..1285 CDD:289468
CcmA 1391..1672 CDD:224054
ABC_subfamily_A 1391..1609 CDD:213230
Abcg4NP_001100286.2 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
11.000

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