Sequence 1: | NP_001262752.1 | Gene: | CG31213 / 42382 | FlyBaseID: | FBgn0051213 | Length: | 1809 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_038948786.1 | Gene: | Abca13 / 289797 | RGDID: | 1305895 | Length: | 5037 | Species: | Rattus norvegicus |
Alignment Length: | 1834 | Identity: | 442/1834 - (24%) |
---|---|---|---|
Similarity: | 758/1834 - (41%) | Gaps: | 413/1834 - (22%) |
- Green bases have known domain annotations that are detailed below.
Fly 93 LANIS------EFKSVEVFDTNSELYLQLMINRNAI-GIAFPSE--WYDIKSCPEVL----NLTI 144
Fly 145 -------------------FMPLSIKRKDFKYFESGFLLLQERISKIFIFFKNAGNGKIPRVLMN 190
Fly 191 HFPYPSYVPNHYAESAKAMTYMTLISFFLPCITIAKYVVA----------EKERHQKAVLTAMGF 245
Fly 246 SNSIHWLAWYTKSMLLLLLCLLIMISIFSIGLIYEFSSLVCLMTIFLVYIH------SLVLFAFF 304
Fly 305 ISSFFSRSLSAVVATILMYFSTALPF--LIVGAENSSVAAQT----AASIGLNSALFYILDSVAV 363
Fly 364 MEMQSVGAQWYTIDNTAS-SGYKLSIVGYMLIMISI-----SWIELLICLYIEAVRTGEFEVPQP 422
Fly 423 WSYPFQRRYW-----------CPLRYGSSVFHQ-----GALLPLAGKNSEGNLPAAHPTRQPIIY 471
Fly 472 LDDRTQENFQRVNISKKIGIEVRSLSKTFGFRNV-VKDLFFNVYENEITALVGHKGSGKTTIIMM 535
Fly 536 LCGILQPTTGTVLINGYDIVTEAKVAKSSLGICPQHSVIFKGMSARDHIYFFSRVKG--YNKTEA 598
Fly 599 MMESNIYISKLGLVDSQKWDAMRLSPGNQRRLSLACALCAGSKVILCDEPSSGLDPIGRHELMRF 663
Fly 664 LQKEKHGRTILMTTQQLEEGEILADRIAIMNDGQILCYGTLGYLKQLPFTSYTLSCQMAPN---- 724
Fly 725 ---SKADNLTDLVRLYMTTTTSPVFHGVDVSYKLPRSQIDR--FPEFFQQLEENKKSLNVVSFGV 784
Fly 785 SDSTLDGIYLSLDYGQGSSRLRGGADPGVNDKVEFGVQTDKAIRTKDRANNSLVRYQHQVDPPNE 849
Fly 850 TILNTKTPINPI-----EIWR----PIDREKGSC---MAQWQAMFIKKKNYTASRALIFILILII 902
Fly 903 PLFYYIIVLGTAASEKCAHRTDKQPVLPLSLDYYSYDDMIILLEVDKQLYKSEGEAYVQLVKEPA 967
Fly 968 TVESVDSIFSHLLKAPPIIRRDIKRKYVCGASFNNASTITAWFNSDAFE---HSAPIALNLVYNA 1029
Fly 1030 LGKAVFEDQDFSILVNRGDLHDFIWLNNASSMRRRYKRQNDPDYT--------DYSDYEIQEYDV 1086
Fly 1087 V--VKPNSSSTSGQHNKSNPGDDNIITVQMSIIEAASTLYNEKGKRK-----QLFGTLII----- 1139
Fly 1140 ----------ITAY----------------------IALCLSI-FSIF-------VTKERVEHFK 1164
Fly 1165 MQQEIYGVTLFYFWSTHFVGDFLIY--AIYMGALTIAIYHFTIW------YQVVVMLLLIGFACL 1221
Fly 1222 PFVYLCSLLFSLPNIAFA---------GIFAILVMTGGMLFSFM---YMLTLITDVNFTTVFAIL 1274
Fly 1275 PMYVGTFGLFKCLAWREYCNREVLPPIEELDCKFG--------NCN----VFCACKPERTWMEVW 1327
Fly 1328 LLMVH--CLVWFIFLWFSNFGYEIGYRFKPKLSNRIWHNNEKHIRVLDEERRVGLIPKYEHEDYP 1390
Fly 1391 IIVDQVTKNY---CRAK-NAVQLVSFAIRPGDTFGLLGAQGAGKTSIFQMIAGETSMSHGNIYVR 1451
Fly 1452 --GHSLREHRNAAKMEV--GFCPQGDNAPKYLTGRQLLRIHCLLHGVPKDHIKAVSEQMAIEFNF 1512
Fly 1513 KDQLDRPIHTYSGGKKRKLNIALA-IDSGSVLCLDDTNGSVDHATQRFIWRKLEAVKRSGRPVLL 1576
Fly 1577 TTQSMEEANAVCSRVAFLVAGEMMFIGSLQQVRSEVSNTIVIRLRVNPSDGKLKRRFQQLIADMA 1641
Fly 1642 EL-FPLATLHEALETCLIYHININVTTLANLFYQMEKIRNEGLL--EDYSITQVSLDEIYRILND 1703
Fly 1704 EEDPNL-VDLDSTH 1716 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
CG31213 | NP_001262752.1 | ABC2_membrane_3 | 32..>295 | CDD:289468 | 55/243 (23%) |
ABC_subfamily_A | 491..708 | CDD:213230 | 79/219 (36%) | ||
drrA | 498..796 | CDD:130256 | 101/309 (33%) | ||
ABC2_membrane_3 | <1132..1285 | CDD:289468 | 53/217 (24%) | ||
CcmA | 1391..1672 | CDD:224054 | 89/290 (31%) | ||
ABC_subfamily_A | 1391..1609 | CDD:213230 | 81/226 (36%) | ||
Abca13 | XP_038948786.1 | rim_protein | 1..>82 | CDD:130324 | |
rim_protein | 3042..5029 | CDD:130324 | 442/1834 (24%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C166342257 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D131191at2759 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR19229 |
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
4 | 3.950 |