DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG31213 and Abca13

DIOPT Version :9

Sequence 1:NP_001262752.1 Gene:CG31213 / 42382 FlyBaseID:FBgn0051213 Length:1809 Species:Drosophila melanogaster
Sequence 2:XP_038948786.1 Gene:Abca13 / 289797 RGDID:1305895 Length:5037 Species:Rattus norvegicus


Alignment Length:1834 Identity:442/1834 - (24%)
Similarity:758/1834 - (41%) Gaps:413/1834 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    93 LANIS------EFKSVEVFDTNSELYLQLMINRNAI-GIAFPSE--WYDIKSCPEVL----NLTI 144
            |||:|      .|::||..||......:||...:.: .|.|.|.  ...|:|.|..|    ..||
  Rat  3398 LANLSSCVLLDRFQAVETVDTLETKAHELMQQNSFLASIIFNSSLGHRHIRSAPHKLPPHVTYTI 3462

  Fly   145 -------------------FMPLSIKRKDFKYFESGFLLLQERISKIFIFFKNAGNGKIPRVLMN 190
                               |.|.::....||| ...|:.||:.|.:..|..:.......|.....
  Rat  3463 RTNILYSMRTDMIKNPSWKFHPQNLPASGFKY-NYIFVPLQDMIERAIIVVQTGQESLEPTAQAQ 3526

  Fly   191 HFPYPSYVPNHYAESAKAMTYMTLISFFLPCITIAKYVVA----------EKERHQKAVLTAMGF 245
            ..|||.:..:         .::..:.||.|.|.:..::|:          |:|...:..:..||.
  Rat  3527 AAPYPCHTSD---------LFLNNVGFFFPLIMMLTWMVSVASMVRKLVYEREIQIEEYMRIMGL 3582

  Fly   246 SNSIHWLAWYTKSMLLLLLCLLIMISIFSIGLIYEFSSLVCLMTIFLVYIH------SLVLFAFF 304
            ...||:|:|:.::|..|.|      |..::.||.:.|.:......|:::::      |.|:.::|
  Rat  3583 HPVIHFLSWFLENMATLAL------SSAALALILKMSGIFMHSDAFIIFLYLLNFGVSAVMLSYF 3641

  Fly   305 ISSFFSRSLSAVVATILMYFSTALPF--LIVGAENSSVAAQT----AASIGLNSALFYILDSVAV 363
            :|.||:::.:|.:.|.|.|..:.||:  |:|.....|.|.||    .::......:|:|    ..
  Rat  3642 LSVFFNKANTAALCTSLGYMISFLPYVVLLVLHNQLSFALQTLLCLLSTTAFGQGVFFI----TF 3702

  Fly   364 MEMQSVGAQWYTIDNTAS-SGYKLSIVGYMLIMISI-----SWIELLICLYIEAVRTGEFEVPQP 422
            :|.|..|.||..:..... .|.....|.:|::..||     .|       |...:..|.|.:.:|
  Rat  3703 LEGQEEGIQWGNMYRAPEPGGMTFGWVCWMILFDSILYFLGGW-------YFSNLVPGTFGLGKP 3760

  Fly   423 WSYPFQRRYW-----------CPLRYGSSVFHQ-----GALLPLAGKNSEGNLPAAHPTRQPIIY 471
            |.:||...||           |.|..|...|::     |    |:.:|..|.:....|       
  Rat  3761 WYFPFTASYWKSICGLMERRRCSLSSGLFFFNEDFGNKG----LSQQNGPGEMEGGSP------- 3814

  Fly   472 LDDRTQENFQRVNISKKIGIEVRSLSKTFGFRNV-VKDLFFNVYENEITALVGHKGSGKTTIIMM 535
                              |:.:.|::|.:....| |::|....:.::||||:|..|:||||||.|
  Rat  3815 ------------------GVALISVTKEYEDHKVAVQELTLTFHRDQITALLGTNGAGKTTIISM 3861

  Fly   536 LCGILQPTTGTVLINGYDIVTEAKVAKSSLGICPQHSVIFKGMSARDHIYFFSRVKG--YNKTEA 598
            |.|:..||:||:::||.::.|:....:..||:||||.|:...::.|:|:..|:.:|.  :...|.
  Rat  3862 LMGLFPPTSGTIIVNGKNLQTDFSKVREELGVCPQHDVLLDNLTVREHLMLFASIKAPWWTNKEL 3926

  Fly   599 MMESNIYISKLGLVDSQKWDAMRLSPGNQRRLSLACALCAGSKVILCDEPSSGLDPIGRHELMRF 663
            ..:.|..:.::.|...|...|..||.|.:|:||:..|....||.::.||||||:||..|..|...
  Rat  3927 RQQVNKTLEEVELTQHQHKPARVLSGGMKRKLSIGIAFMGMSKTVVLDEPSSGVDPCSRRSLWNI 3991

  Fly   664 LQKEKHGRTILMTTQQLEEGEILADRIAIMNDGQILCYGTLGYLKQLPFTSYTLSCQMAPN---- 724
            |.|.:.||||:.||..|:|.|:|:|.:|::..|::.||.....||:......||:....|:    
  Rat  3992 LLKYRKGRTIIFTTHHLDEAEVLSDHVAVLQQGRLRCYAPPAGLKETYGQGLTLTLSKQPSVLES 4056

  Fly   725 ---SKADNLTDLVRLYMTTTTSPVFHGVDVSYKLPRSQIDR--FPEFFQQLEENKKSLNVVSFGV 784
               .....:|.|:::|:........:|.:::|.:|: ..|:  |....|.|::|.:.|::..:|:
  Rat  4057 QEPKDVARVTSLIQVYIPQAFLKDSNGGELTYTIPK-DADKTCFKGLCQALDQNLQHLHLTGYGI 4120

  Fly   785 SDSTLDGIYLSLDYGQGSSRLRGGADPGVNDKVEFGVQTDKAIRTKDRANNSLVRYQHQVDPPNE 849
            ||:||:.::|.|                                .:|....|.:...::::..||
  Rat  4121 SDTTLEEVFLML--------------------------------LQDTNKKSYITPDNKLESQNE 4153

  Fly   850 TILNTKTPINPI-----EIWR----PIDREKGSC---MAQWQAMFIKKKNYTASRALIFILILII 902
                  .|:.|.     .:.|    .:....|.|   :.|..|:..|:..:|..........|.:
  Rat  4154 ------KPVGPCLRHCGSLMRTLPDSLPEPMGGCQLLLGQAGALLRKRLLHTLRAWKSTTSDLFL 4212

  Fly   903 PLFYYIIVLGTAASEKCAHRTDKQPVLPLSLDYYSYDDMIILLEVDKQLYKSEGEAYVQLVKEPA 967
            |:.:..:.:|....:..|   ...|.|.|:..:|         |..:..:.|.|           
  Rat  4213 PVLFVALAMGLFMVQPLA---ITYPPLKLTPGHY---------ETAEAYFFSSG----------- 4254

  Fly   968 TVESVDSIFSHLLKAPPIIRRDIKRKYVCGASFNNASTITAWFNSDAFE---HSAPIALNLVYNA 1029
               :.|...:|:|     :||...:..||..:        .|.||.::.   :|.|         
  Rat  4255 ---NHDPDLTHVL-----LRRFGDQDPVCSDA--------QWVNSSSWHRDPYSGP--------- 4294

  Fly  1030 LGKAVFEDQDFSILVNRGDLHDFIWLNNASSMRRRYKRQNDPDYT--------DYSDYEIQEYDV 1086
                  |.||                 :...::...|....|..|        :.|.|:::||.:
  Rat  4295 ------EFQD-----------------SCGCLKCPNKSAGAPYLTNCLGHTLLNLSGYDVEEYLL 4336

  Fly  1087 V--VKPNSSSTSGQHNKSNPGDDNIITVQMSIIEAASTLYNEKGKRK-----QLFGTLII----- 1139
            |  .||.....|......|..:| :.|........|...||:||...     .....||:     
  Rat  4337 VPSAKPRLGGWSFGVQIPNEAED-VKTNTSKPKTLAKVWYNQKGFHSLPSYLNHLNNLILWQNLP 4400

  Fly  1140 ----------ITAY----------------------IALCLSI-FSIF-------VTKERVEHFK 1164
                      ||.|                      :|||:.: |||.       |.|:||...|
  Rat  4401 AHAADWRQYGITLYSHPYGGALLNEDRILESIRQCGVALCIVLGFSILSASIGSSVVKDRVTGAK 4465

  Fly  1165 MQQEIYGVTLFYFWSTHFVGDFLIY--AIYMGALTIAIYHFTIW------YQVVVMLLLIGFACL 1221
            ..|.|.|:....:|..:|:.|.|.|  ::.:....||.:..|.:      ....::|.|.|:|.:
  Rat  4466 RLQHISGLGYRTYWLINFLYDMLFYLVSVCLCVAIIAAFQLTAFTFRENLAATALLLALFGYAMI 4530

  Fly  1222 PFVYLCSLLFSLPNIAFA---------GIFAILVMTGGMLFSFM---YMLTLITDVNFTTVFAIL 1274
            |::||.|.:||..::||.         |:..:|:.|...|.:.:   ..|..|.|| ...||.|.
  Rat  4531 PWMYLISRIFSSSDVAFISYISLNFIFGLCTMLMTTMPRLLAIISKAQSLQKIYDV-LKWVFTIF 4594

  Fly  1275 PMYVGTFGLFKCLAWREYCNREVLPPIEELDCKFG--------NCN----VFCACKPERTWMEVW 1327
            |.:....||.      |.|..::.   .:|...||        ..|    :|.....:.|::.:.
  Rat  4595 PQFCLGQGLI------ELCYNQIK---YDLTHNFGIDSYVSPFEINFLGWIFVELTLQGTFLLLL 4650

  Fly  1328 LLMVH--CLVWFIFLWFSNFGYEIGYRFKPKLSNRIWHNNEKHIRVLDEERRVGLIPKYEHEDYP 1390
            .:::|  ||.|                  |: .:....:..|.::.:|.|:....:.:.......
  Rat  4651 RILLHGDCLRW------------------PR-GHSALQDIVKPVKDIDVEKEQMRVLEGRTGGDM 4696

  Fly  1391 IIVDQVTKNY---CRAK-NAVQLVSFAIRPGDTFGLLGAQGAGKTSIFQMIAGETSMSHGNIYVR 1451
            :::..::|:|   ||.| .||..:|..|..|:.|||||..||||::.|:::.|||..|.|...:|
  Rat  4697 LVLCNLSKSYRGVCRGKTTAVHGISLGISRGECFGLLGVNGAGKSTTFKILNGETPPSSGYATIR 4761

  Fly  1452 --GHSLREHRNAAKMEV--GFCPQGDNAPKYLTGRQLLRIHCLLHGVPKDHIKAVSEQMAIEFNF 1512
              ...:.:..:|.|:.|  |:|||.|...:.|||.:.|:.:|.|.|:||.:|..|:..:....:.
  Rat  4762 TPQGDMVDLASAGKVGVLIGYCPQQDALDELLTGWEHLQYYCRLRGIPKQNIPEVAADLVRRLHL 4826

  Fly  1513 KDQLDRPIHTYSGGKKRKLNIALA-IDSGSVLCLDDTNGSVDHATQRFIWRKLEAVKRSGRPVLL 1576
            :..:|:|:.|||||.:|||:.||| :....:|.||:.:..:|..::|::|:.:....|.|...:|
  Rat  4827 ELHVDKPVATYSGGTRRKLSTALALVGKPDILLLDEPSSGMDPCSKRYLWQTITQEVRDGCAAVL 4891

  Fly  1577 TTQSMEEANAVCSRVAFLVAGEMMFIGSLQQVRSEVSNTIVIRLRVNPSDGKLKRRFQQLIADMA 1641
            |:.||||..|:|:|:|.:|.|....:||.|.:::...:...:::.::....:     ...::|..
  Rat  4892 TSHSMEECEALCTRLAIMVDGSFRCLGSPQHIKNRFGDGYTVKVWLHKEGSQ-----PSAVSDCL 4951

  Fly  1642 EL-FPLATLHEALETCLIYHININVTTLANLFYQMEKIRNEGLL--EDYSITQVSLDEIYRILND 1703
            :| ||...........|.||:..:...|.:||..:|  .|:.||  |.|||:|.:|::::.....
  Rat  4952 KLHFPGIQFKGQRLNLLEYHVQKSWECLPDLFRVLE--TNKSLLKIEHYSISQTALEQVFVNFAT 5014

  Fly  1704 EEDPNL-VDLDSTH 1716
            |:.|:. ||..||:
  Rat  5015 EQTPHFPVDPPSTN 5028

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31213NP_001262752.1 ABC2_membrane_3 32..>295 CDD:289468 55/243 (23%)
ABC_subfamily_A 491..708 CDD:213230 79/219 (36%)
drrA 498..796 CDD:130256 101/309 (33%)
ABC2_membrane_3 <1132..1285 CDD:289468 53/217 (24%)
CcmA 1391..1672 CDD:224054 89/290 (31%)
ABC_subfamily_A 1391..1609 CDD:213230 81/226 (36%)
Abca13XP_038948786.1 rim_protein 1..>82 CDD:130324
rim_protein 3042..5029 CDD:130324 442/1834 (24%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166342257
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D131191at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR19229
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.950

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