DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG31213 and Abca9

DIOPT Version :9

Sequence 1:NP_001262752.1 Gene:CG31213 / 42382 FlyBaseID:FBgn0051213 Length:1809 Species:Drosophila melanogaster
Sequence 2:XP_038943368.1 Gene:Abca9 / 287788 RGDID:1305931 Length:1653 Species:Rattus norvegicus


Alignment Length:1856 Identity:418/1856 - (22%)
Similarity:775/1856 - (41%) Gaps:388/1856 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 QKYRLLLWKDI-KLQLTNWV-------ELVMIIFLSALMPIF-FSIGTKVAKSIFPPDIEMEKSP 64
            :|.||.|.:.: .|...||:       |.::...||.|:.:. :.:.:.:.:....|::.|....
  Rat    32 RKRRLRLGQQMWALLCKNWLRKFRMRRETLLEWLLSFLLILLAYQLSSNLHQVHDAPEMSMMDLG 96

  Fly    65 GPKSVNTSLFVDLYFTPNNGILEQLITQLANISEFKS----VEVFDTNSELYLQLMINRNAIGIA 125
            .....|.|.:: :.|.|.:....: |..:|.::.|..    |...|.:|...|.|..:.:|:.:.
  Rat    97 RVDDFNDSNYI-IVFAPESETTHE-IMNIAALAPFMKGRTIVACPDESSMSELNLNYSIDAVRVI 159

  Fly   126 FPSEW-YDIKSCPEVLNLTIF-----MPLSIKRKD-------FK---------YFESGFLLLQER 168
            |...: |.:|          |     :|.:.:.||       ||         ::|.||:..|..
  Rat   160 FKDTFSYHLK----------FSWGQRIPKTKEHKDHTAPCEPFKNKMVCENSVFWEKGFVAFQTA 214

  Fly   169 ISKIFIFFKNAGNGKIPRVLMNHFPYPSYVPNHYAESAKAMTYMTLIS---------FFLPCITI 224
            |        |||   |..|..||    |.:....:.....|.....|:         .|...|:.
  Rat   215 I--------NAG---IIEVTTNH----SVMEELMSVIGSVMKMQPFIAQGGVATDFFIFFCVISF 264

  Fly   225 AKYV------VAEKERHQKAVLTAMGFSNSIHWLAWYTKSMLLLLLCLLIMISIFSIGLIYEFSS 283
            :.::      |.::.:....::..||...|..||:|.......:|:...:|..|.....:...:.
  Rat   265 SSFIYYLSVNVTQERQSITTLMAMMGLRESAFWLSWGLMYAGFILVVATLMSLIVKSTQVVVLTG 329

  Fly   284 LVCLMTIFLVYIHSLVLFAFFISSFFSRS-LSAVVATILMYFSTALPFLIVGAENSSVAAQTAAS 347
            .:.:..:||:|..||:..:|.:|....:. |:.:...:|..|..:|.|             ||..
  Rat   330 FMVVFLLFLLYGLSLITLSFLMSVLLKKPFLTGLAVFLLTVFWGSLGF-------------TALY 381

  Fly   348 IGLNSALFYILDSVAVMEMQSVGAQWYTID---------NTASSGYKLSIVGYMLIMISISWIEL 403
            ..|.:.:.:||..::.....:..||...:|         |:.::.|.:....:||::.::  :.|
  Rat   382 KHLPAFMEWILCFLSPFAFINGMAQLIHLDYDVNSNVNLNSPNNSYLILATLFMLVLDAL--LYL 444

  Fly   404 LICLYIEAVRTGEFEVPQPWSYPFQRRYWCPLRYGSSVFHQGALLPLAGKNSEGNLPAAHPTRQP 468
            .:.||.:.:...::...:...:..:..||...|....|..:         |...:.|:.:.:.:|
  Rat   445 ALALYFDKILLSKYGHQRSPLFFLKSSYWFQRRGADHVVLE---------NEIDSAPSLNDSLEP 500

  Fly   469 IIYLDDRTQENFQRVNISKKIGIEVRSLSKTF----GFRNVVKDLFFNVYENEITALVGHKGSGK 529
            :       ...||     .|..|.:::|.|.:    |....::.|.|::||.:||||:||.|:||
  Rat   501 V-------SPEFQ-----GKEAIRIKNLRKEYTGKHGKVEALRGLGFDIYEGQITALLGHSGAGK 553

  Fly   530 TTIIMMLCGILQPTTGTVLINGYDI-VTEAKVAKSSL-GICPQHSVIFKGMSARDHIYFFSRVKG 592
            ||:|..|.|:..||||::.|....: .||...|...| |:|||.::.|..::.::::..|:::||
  Rat   554 TTLINTLSGLSPPTTGSITIYNQTVSETEDSYAVPKLTGVCPQSNIQFGFLTVQENLRLFAKIKG 618

  Fly   593 YNKTEAMMESNIYISKLGLVDSQKWDAMRLSPGNQRRLSLACALCAGSKVILCDEPSSGLDPIGR 657
            ....|...|....:..|.:.:.|...|..||.|.:|:|:...|:....:|:|.|||::||||:.|
  Rat   619 ILPQEVEQEVRQVLRDLEMENIQDTLAQNLSGGQKRKLTFGIAILGDPQVLLLDEPTAGLDPLSR 683

  Fly   658 HELMRFLQKEKHGRTILMTTQQLEEGEILADRIAIMNDGQILCYGTLGYLKQLPFTSYTLSCQMA 722
            |.:...|::.:.||.|:.:||.::|.:|||||...:::|::.|.|:..:||:.....|.||..:.
  Rat   684 HHIWNLLKERRSGRVIVFSTQFMDEADILADRKVFISNGRLRCAGSSLFLKKKWGIGYHLSLHLN 748

  Fly   723 PNSKADNLTDLVRLYMTTTTSPVFHGVDVSYKLPRSQIDRFPEFFQQLEENKKSLNVVSFGVSDS 787
            .....:::|.||:.::............:.|.||..:.::||:.::.|:..... .:..:.||.:
  Rat   749 ETCDPESITSLVKKHIPDARLTAQSDEQLVYILPLERTNKFPDLYRDLDRCSNH-GIEDYDVSMT 812

  Fly   788 TLDGIYLSLDYGQGSSRLRGGADPGVNDKVEFGVQTDKAIRTKDRANN--SLVRYQHQVDPPNET 850
            ||:.::|.|   :|.| :....|.||..::           ..|.|.:  |||..        |.
  Rat   813 TLNEVFLKL---EGKS-MAEEPDAGVCGRL-----------LSDGAKDVESLVEL--------ER 854

  Fly   851 ILNTKTPINPIEIWRPIDREKGSC--MAQW--------QAMFIKKKNYTASRALIFILIL----I 901
            :|             |:|....|.  ||.|        :..|:|.||  ..|:|:.:|:|    .
  Rat   855 VL-------------PLDSSGSSVSGMALWRQQLCAVAKVRFLKLKN--ERRSLMTMLLLFGISF 904

  Fly   902 IP-LFYYIIVLGTAASEKCAHRTDKQPVLPLSLDYYSYDDMIILLEVDKQLYKSEGEAYVQLVKE 965
            :| |..:::.       |..|::....:.|                  ...:.|.|    ||.::
  Rat   905 VPQLLEHLVY-------KVYHKSYSWGLSP------------------SMYFLSPG----QLPQD 940

  Fly   966 PATVESVDSIFSHLLKAPPIIRRDIKRKYVCGASFNNASTITAWFNSDAFEHS---APIALNL-- 1025
            |.|         |||    :|.:       .|:|.:|            |.||   ..|||::  
  Rat   941 PLT---------HLL----VINK-------TGSSIDN------------FIHSLRQQGIALDVDA 973

  Fly  1026 ----------VYNALGKAVFEDQD--FSILVNRGDLHDF-----IWLNNASSMRRRYKRQNDPDY 1073
                      :||.....:.:::|  ||:..|...|:.|     |..|....:....:|......
  Rat   974 LGTRNGKEEALYNGAVTVLGDEKDLRFSVACNAKRLNCFPVLADILSNGLLGIFNSSERIQTDRS 1038

  Fly  1074 TDYSDYEIQEYDVVVKPNSSSTSGQHNKSNPGDDNIITVQMSIIEAASTLYNEKGKRKQLFGTLI 1138
            |.:.|:.:.||..:              ||        ....|..|||                 
  Rat  1039 TVFEDHMLYEYGFM--------------SN--------AFFWIPVAAS----------------- 1064

  Fly  1139 IITAYIALCLSIFSIFVTKERVEHFKMQQEIYGVTLFYFWSTHFVGDFLIYAIYMGALTIAIYHF 1203
             :|.|||:    .||...|::|   ..|....|:....:|....:.|..||.:.:..:.|....|
  Rat  1065 -LTPYIAM----GSISDHKKKV---LSQLWTSGLYPSAYWCGQALVDIPIYFLILLLMQIMDSVF 1121

  Fly  1204 TI-WYQVVVMLLLIGFACLPFVYLCSLLFSLPNIAFAGIFAILVMTGGM----LFSFMYMLTLIT 1263
            :. ....|:..|||...| ...|..||:|....|:|       |...|.    ::||.:::    
  Rat  1122 SSEEIMSVIESLLIQIPC-SIGYASSLIFLTYVISF-------VFRNGRKNSGIWSFFFLI---- 1174

  Fly  1264 DVNFTTVFAILPMYVGTFGLFKCLAWREYCNREVLPPIEEL-------DCKFGNCNVFCACKPER 1321
                .|:|.|:...:..:|..:.|    :|.. ::||...:       :..:.:.:...:.:.:.
  Rat  1175 ----VTIFFIVATDINEYGFLQLL----FCTL-LIPPFTLIGSLLIFSEVSYDSVDYLGSSESQL 1230

  Fly  1322 TWMEVWLLMVHCLVWFI-------FLWFSNFGYEIGYRFKPKLSNRIWHNNE------KHIRVLD 1373
            .::.:.:..:|.|::|.       ::.......:..:|..|: |.|.:.|.|      :.:: ::
  Rat  1231 VFLALLIPYLHFLLFFFILRCLERYIRKKTLRVDPVFRISPR-SCRAFPNPEDPGEEDEDVQ-ME 1293

  Fly  1374 EERRVGLIPKYEHEDYPIIVDQ-VTKNY------C----RAKNAVQLVSFAIRPGDTFGLLGAQG 1427
            ..|..|.:...:.::.|:|:.. :.|.|      |    :.|.|.:.:||.::.|:..||||..|
  Rat  1294 RVRTSGAMTTPQMDEKPVIIASCLRKEYTVKTKRCFSKTKKKIATRNISFCVKKGEVLGLLGHNG 1358

  Fly  1428 AGKTSIFQMIAGETSMSHGNIYVRGHSLREHRNAAKMEVGFCPQGDNAPKYLTGRQLLRIHCLLH 1492
            |||::...||.|:|..:.|.::::|.|    .:||...:|:|||.:.....||.::.|.::..:.
  Rat  1359 AGKSTTISMITGDTVPTAGQVFLKGSS----GSAALGFLGYCPQENVLWPNLTVKEHLEVYAAVK 1419

  Fly  1493 GVPKDHIKAVSEQMAIEFNFKDQLDRPIHTYSGGKKRKLNIALAI-DSGSVLCLDDTNGSVDHAT 1556
            |:.|........::......:|||...:.|.|.|.||||...|:| .:.||:.||:.:..:|...
  Rat  1420 GLRKKEAIVTITRLVNALKLQDQLKALVKTLSEGVKRKLCFVLSILGNPSVVLLDEPSTGMDPEG 1484

  Fly  1557 QRFIWRKLEAV-KRSGRPVLLTTQSMEEANAVCSRVAFLVAGEMMFIGSLQQVRSEVSNTIVIRL 1620
            |:.:|:.:.|. ..:.|..||||..|.||.|||.|||.:|:|.:..|||:|.::|:.....::.:
  Rat  1485 QQQMWQAIRATFTNTERGALLTTHYMAEAEAVCDRVAIMVSGRLRCIGSIQHLKSKFGKDYLLEM 1549

  Fly  1621 RVNPSDGKLKRRFQQLIADMAELFPLATLHEALETCLIYHINI-NVTTLANLFYQMEKIRNEGLL 1684
            ::     |.....:.|..::..|||.|...|...:.::|.:.: :|..|:..|:::|:::....|
  Rat  1550 KL-----KTPALVESLNTEILRLFPQAARQERYSSLMVYKLPVEDVRPLSEAFFKLERLKENFDL 1609

  Fly  1685 EDYSITQVSLDEIYRILNDEEDPNLVDLDSTHNSEV 1720
            |:||::|.:|::::..|:.|::  |.|.|...:|.|
  Rat  1610 EEYSLSQSTLEQVFLELSKEQE--LGDFDEEGSSSV 1643

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31213NP_001262752.1 ABC2_membrane_3 32..>295 CDD:289468 56/304 (18%)
ABC_subfamily_A 491..708 CDD:213230 76/222 (34%)
drrA 498..796 CDD:130256 93/303 (31%)
ABC2_membrane_3 <1132..1285 CDD:289468 35/157 (22%)
CcmA 1391..1672 CDD:224054 86/294 (29%)
ABC_subfamily_A 1391..1609 CDD:213230 75/230 (33%)
Abca9XP_038943368.1 rim_protein <207..1630 CDD:130324 376/1652 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166342260
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D131191at2759
OrthoFinder 1 1.000 - - FOG0000051
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.850

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