DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG31213 and Abca5

DIOPT Version :9

Sequence 1:NP_001262752.1 Gene:CG31213 / 42382 FlyBaseID:FBgn0051213 Length:1809 Species:Drosophila melanogaster
Sequence 2:NP_775429.1 Gene:Abca5 / 286970 RGDID:628661 Length:1642 Species:Rattus norvegicus


Alignment Length:1881 Identity:433/1881 - (23%)
Similarity:785/1881 - (41%) Gaps:425/1881 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 RNLTYCQKYRLLLWKDIKLQLTNWVELVMIIFLSALMPIFFSIGTKVAKSIFP-------PDIEM 60
            |::...::.|.||.|:..::.......|..|    |.|:||.....:...:.|       .|||:
  Rat     6 RDVGVWRQTRTLLLKNYLVKCRTKKSSVQEI----LFPLFFLFWLILISMMHPNKKYEEVSDIEL 66

  Fly    61 EKSPGPKSVNTSLFVDLYFTP----NNGILEQLITQLANISEFKSVEVFDTNSELYL-QLMINRN 120
              ||..||:.::|.  |.:||    .:.:::::.|.  ::.:....|.:.:..||.. .|....|
  Rat    67 --SPMDKSILSNLI--LGYTPVTNTTSSVMQRVSTD--HLPDVLVTEEYASEKELLASSLSKPSN 125

  Fly   121 AIGIAFPSEW-YDIKSCPEVLNLTIFMPLSIKRKDFK-----------YFESGFLLLQERISKIF 173
            .:|:.|.... |:::..|::      :|:|....|.:           |:.|||..||..|....
  Rat   126 FVGVVFKDVMSYELRFFPDM------VPVSSVYMDSRAGCSKSCDAAQYWSSGFTALQASIDAAI 184

  Fly   174 IFFKNAGN-------------GKIPRVLMNHFPYPSYVPNHYAESAKAMTYMTLISFFLPC-ITI 224
            |..|...:             |:...|.::.||             :.:..:.|:..|.|. ..:
  Rat   185 IQLKTNVSLWRELESTKAVIMGEAAVVEIDTFP-------------RGVILIYLVIAFSPFGYFL 236

  Fly   225 AKYVVAEKERHQKAVLTAMGFSNSIHWLAWYTKSMLLLLLCLLIMISIFSIGLIYEFSSLVCLMT 289
            |.::|||||:..|..|..||..::..||:|......|:.|..|:|..|.:...::..||.:.:..
  Rat   237 AIHIVAEKEKRLKEFLKIMGLHDTAFWLSWVLLYTSLIFLMSLLMAVIATASSLFPQSSSIVIFL 301

  Fly   290 IFLVYIHSLVLFAFFISSFFSRSLSAVV----ATILMYFSTALPFLIVGAENS-----SVAAQTA 345
            :|.:|..|.|.||..::..|.:|....|    .|::..|...|..|:.....|     |...|.|
  Rat   302 LFFLYGLSSVFFALMLTPLFKKSKHVGVVEFFVTVVFGFVGLLIVLVESFPRSLVWLFSPLCQCA 366

  Fly   346 ASIGLNSALFYILDSVAVMEMQ--SVGAQWYTIDNTASSGYKLSIVGYMLIMISISWIELLICLY 408
            ..||:          ..||.::  :.||.:.::   ....|.|.|...||.:.|:.:  .|:.:|
  Rat   367 FLIGI----------AQVMHLEDFNEGALFSSL---TEGPYPLIITLTMLALDSVFY--ALLAVY 416

  Fly   409 IEAVRTGEFEVPQPWSYPFQRRYWCPLRYGSSVFHQGALLPLAGKNSEGNLPAAHPTRQPIIYLD 473
            ::.|..|||.:.:...|..:..||...:.......:|        |..||: :.:...:|:    
  Rat   417 LDQVIPGEFGLRRSSLYFLKPSYWSKNKRNYKELSEG--------NINGNI-SLNEIVEPV---- 468

  Fly   474 DRTQENFQRVNISKKIG---IEVRSLSKTFGFRN----VVKDLFFNVYENEITALVGHKGSGKTT 531
                       .|:.||   |.:..:.|.:..:|    .:::|.|::||.:||||:||.|:||:|
  Rat   469 -----------SSEFIGKEAIRISGIQKAYRKKNETVEALRNLSFDIYEGQITALLGHSGTGKST 522

  Fly   532 IIMMLCGILQPTTGTVLINGYDI--VTEAKVAKSSLGICPQHSVIFKGMSARDHIYFFSRVKGYN 594
            ::.:|||:..|:.|...|.|:.:  :.|...|:..:|||||..:.|..::..:::...:.|||..
  Rat   523 LMNILCGLCPPSDGFASIYGHRVSEIDEMFEARKMIGICPQSDMNFDVLTVEENLSILASVKGIP 587

  Fly   595 KTEAMMESNIYISKLGLVDSQKWDAMRLSPGNQRRLSLACALCAGSKVILCDEPSSGLDPIGRHE 659
            ....:.|....:..|.:...:...|.:||.|.:|:|||..|:....|::|.|||::|:||..||.
  Rat   588 ANNIIQEVQKVLLDLDMQAIKDNQAKKLSGGQKRKLSLGIAVLGNPKILLLDEPTAGMDPCSRHI 652

  Fly   660 LMRFLQKEKHGRTILMTTQQLEEGEILADRIAIMNDGQILCYGTLGYLKQLPFTSYTLSCQMAPN 724
            :...|:..|..|..:.:|..::|.:|||||.|:::.|.:.|.|:..:||......|.||..:...
  Rat   653 VWNLLKYRKANRVTVFSTHFMDEADILADRKAVISQGMLKCVGSSIFLKSKWGIGYRLSMYIDRY 717

  Fly   725 SKADNLTDLVRLYMTTTTSPVFHGVDVSYKLPRSQIDRFPEFFQQLEENKKSLNVVSFGVSDSTL 789
            ...::|:.|||.::........:...:.|.||...:|:|...|..|:.: .:|.|:|:|||.:||
  Rat   718 CATESLSSLVRQHIPAAALLQQNDQQIVYSLPFKDMDKFSGLFSALDIH-SNLGVISYGVSMTTL 781

  Fly   790 DGIYLSLDYGQGSSRLRGGADPGVNDKVEFGVQTDKAIRTKDRANNSLVRYQHQVDPPNETIL-- 852
            :.::|.|:.            ....|:.::.|.|.:. |.::..:.|.       |...:::|  
  Rat   782 EDVFLKLEV------------EAEIDQADYSVFTQQP-REEETDSKSF-------DEMEQSLLIL 826

  Fly   853 -NTKTP-INPIEIWRPIDREKGSCMAQWQAMFIKKKNYTASRALIFILILI-IPLFYYIIVLGTA 914
             .||.. ::.:.:|    :::.|.:|::..:.:|:::.:....|:.:||.. :.:|.:::     
  Rat   827 SETKASLVSTMSLW----KQQVSTIAKFHFLSLKRESKSVRSVLLLLLIFFAVQIFMFLV----- 882

  Fly   915 ASEKCAHRTDKQPVLPLSLDYYSYDDMIILLEVDKQLYKSEGEAYVQLVKEPATVESVDSIFSHL 979
                  |.:.|..|:|:.|    ..|:..|...||. :|.:....:|        .|.||..:.|
  Rat   883 ------HHSFKNAVVPIKL----VPDLYFLKPGDKP-HKYKTSLLLQ--------NSTDSDINDL 928

  Fly   980 LKAPPIIRRDIKRKYVCGASFNNASTITAWFNSDAFEHSAP--IALNLVYNALGKAVFEDQDFSI 1042
            :.                 .|...:.|.|.||...:..:||  .|||:|.:.      :|..|:.
  Rat   929 ID-----------------FFTQQNIIVAMFNDSDYVSAAPHSAALNVVQSE------KDYVFTA 970

  Fly  1043 LVNRGDLHDFIWLNNASSMRRRYKRQNDPDYTDYSDYEIQEY-DVVVKPNSSSTSGQHNKSNPGD 1106
            :.|...::....:.|..|....|..........:|...|||. |:|.|                 
  Rat   971 VFNSTMVYSLPVMMNIISNYYLYHLNVTDTIQIWSTPFIQEITDIVFK----------------- 1018

  Fly  1107 DNIITVQMSIIEAASTLYNEKGKRKQLFGTLIIITA---YIALCLSIFSIFVTKERVEHFKM--- 1165
                      :|    ||.:..    |.|  ||:||   |.|:           |..|:.|:   
  Rat  1019 ----------VE----LYFQAA----LLG--IIVTAMPPYFAM-----------ENAENHKIKAY 1052

  Fly  1166 -QQEIYGVTLFYFWSTHFVGD----FLIYAIYMGALTIAIYHFTIWYQV---VVMLLLIGF--AC 1220
             |.::.|:....:|....|.|    |::..:.:|:| .|.:|...:|.|   .|:..||.:  :.
  Rat  1053 TQLKLSGLLPSAYWIGQAVVDIPLFFVVLTLMLGSL-FAFHHGLYFYPVKFLAVVFCLIAYVPSV 1116

  Fly  1221 LPFVYLCSLLFSLPNIAFAGIFAILVMTGGMLFSFMYMLT-----LITDVNFTTVFAILPMYVGT 1280
            :.|.|:.|..|.            .::.....:||:|.:|     .:|::.|...:.:..::..|
  Rat  1117 ILFTYIASFTFK------------KILNTKEFWSFIYSVTALACVAVTEITFFLGYGVTAVFHYT 1169

  Fly  1281 F-------GLFKCL------AWREYCNREVLPPIEELDCKFGNCNVFCACKP-ERTWMEVWLLMV 1331
            |       .|..||      :|:.      :|..|.            |..| :|..:.|.:..:
  Rat  1170 FCIAIPIYPLLGCLISFIKGSWKN------IPKTEN------------AYNPWDRLLVAVIMPYL 1216

  Fly  1332 HCLVWFIFLWFSNFGYEIGYRFKPKLSNRIWHNNEKH----------IRVLDEERRVGLIPKYEH 1386
            .|::| |||                    :.|..:||          .|.|.:        |.:|
  Rat  1217 QCVLW-IFL--------------------LQHYEKKHGGRSIRKDPLFRALSQ--------KAKH 1252

  Fly  1387 EDYP---------------------------------IIVDQVTKNYCRAKN----------AVQ 1408
            :.:|                                 |:|..:.|.|...|:          |.:
  Rat  1253 KKFPEPPINEDEDEDVKAERLKVKELMGCQCCEEKPAIMVYNLHKEYDDKKDFLHSRKTTKVATK 1317

  Fly  1409 LVSFAIRPGDTFGLLGAQGAGKTSIFQMIAGETSMSHGNIYV---RGHSLREHRNAAKMEVGFCP 1470
            .|||.::.|:..||||..||||::|..::.|:...:.|.|::   ..||..:..:...|  |:||
  Rat  1318 YVSFCVKKGEILGLLGPNGAGKSTIINILVGDVEPTSGKIFLGDYGSHSNEDDESTKCM--GYCP 1380

  Fly  1471 QGDNAPKYLTGRQLLRIHCLLHGVPKDHIKAVSEQMAIEFNFKDQLDRPIHTYSGGKKRKLNIAL 1535
            |.:.....:|.::...|:..:.|:....:|.|..::....:.|:.|.:.:.....|.||||..||
  Rat  1381 QTNPLWPDITLQEHFEIYGAVKGMSSGDMKEVISRITKALDLKEHLQKTVKKLPAGIKRKLCFAL 1445

  Fly  1536 A-IDSGSVLCLDDTNGSVDHATQRFIWRKLE-AVKRSGRPVLLTTQSMEEANAVCSRVAFLVAGE 1598
            : :.:..|..||:.:..:|...::.:||.:. |.|...|..||||..||||.|||.|||.:|:|:
  Rat  1446 SMLGNPQVTLLDEPSTGMDPRAKQHMWRAIRTAFKNKKRAALLTTHYMEEAEAVCDRVAIMVSGQ 1510

  Fly  1599 MMFIGSLQQVRSEVSNTIVIRLRV-----NPSDGKLKRRFQQLIADMAELFPLATLHEALETCLI 1658
            :..||::|.::|:......:.:::     |....:|:|..|.       :||.|:..|:..:.|.
  Rat  1511 LRCIGTVQHLKSKFGKGYFLEIKLKDWIENLEIDRLQREIQY-------IFPNASRQESFSSILA 1568

  Fly  1659 YHI-NINVTTLANLFYQMEKIRNEGLLEDYSITQVSLDEIYRIL---NDEEDPNLVDLDST 1715
            |.| ..:|.:|:..|.::|:.::...:|:||.:|.:|::::..|   .:|||.:...|:||
  Rat  1569 YKIPKEDVQSLSQSFAKLEEAKHTFAIEEYSFSQATLEQVFVELTKEQEEEDNSCGTLNST 1629

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31213NP_001262752.1 ABC2_membrane_3 32..>295 CDD:289468 67/300 (22%)
ABC_subfamily_A 491..708 CDD:213230 70/222 (32%)
drrA 498..796 CDD:130256 94/303 (31%)
ABC2_membrane_3 <1132..1285 CDD:289468 39/180 (22%)
CcmA 1391..1672 CDD:224054 85/301 (28%)
ABC_subfamily_A 1391..1609 CDD:213230 71/232 (31%)
Abca5NP_775429.1 ABC2_membrane_3 <214..416 CDD:289468 55/229 (24%)
CcmA 476..788 CDD:224054 95/312 (30%)
ABC_subfamily_A 478..701 CDD:213230 70/222 (32%)
ABC2_membrane_3 <957..1224 CDD:289468 70/352 (20%)
CcmA 1288..1615 CDD:224054 93/335 (28%)
ABC_subfamily_A 1290..1521 CDD:213230 71/232 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166342240
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D131191at2759
OrthoFinder 1 1.000 - - FOG0000051
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.850

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