DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG31213 and Abca16

DIOPT Version :9

Sequence 1:NP_001262752.1 Gene:CG31213 / 42382 FlyBaseID:FBgn0051213 Length:1809 Species:Drosophila melanogaster
Sequence 2:XP_006507746.1 Gene:Abca16 / 233810 MGIID:2388711 Length:1679 Species:Mus musculus


Alignment Length:1853 Identity:447/1853 - (24%)
Similarity:810/1853 - (43%) Gaps:369/1853 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 LLLWKDIKLQ----LTNWVEL--------VMIIFLS-----------------ALMPIFFSIGTK 48
            :||||:..|:    ::...||        :::||.:                 |:||.|.....:
Mouse    11 VLLWKNFTLKKRQIISTSAELLAALLFVIMLLIFRALTDMNIAGPYHFTAQPIAIMPSFIKDAQE 75

  Fly    49 VAKSIFPPDIEMEK---SPGPKSVNTSLFVDLYFTPNNGILEQLITQLANISE-FKSVEVFD--- 106
            ......|.:|::.:   ....:::||::.|..:  |:....|:.|. ..|:|: ..:..|||   
Mouse    76 WELVYIPSEIDVVREIIEDVKRNLNTTIKVRGF--PSEAEFEEYIL-FDNMSQKVLAAIVFDCGF 137

  Fly   107 --TNSELYLQLMINRNAIGIAFPSEWYDIKSCPEVL--NLTIFMP--LSIKRKDFKYFE------ 159
              .:..|.||:..:...:| |..:.|:     |:.|  ...:..|  .||:.::..|.:      
Mouse   138 KNKSDPLPLQVKYHLRFVG-AQRTIWW-----PDKLGWKTRLLFPNHPSIRPRNPNYLDGGSPGY 196

  Fly   160 --SGFLLLQERISKIFIFFKNAGNGK-----IPRVLMNHFPYPSYVPNHYA-ESAKAMTYMTLIS 216
              .|||.:|..:.|..:.:..:..||     |..|: ..|||||:..:... .|:..:..|.::.
Mouse   197 IKEGFLAVQHALDKSIMLYHESSAGKKLFDEIDTVI-QRFPYPSHPQDKLLWISSPFIPLMFILM 260

  Fly   217 FFLPCITIAKYVVAEKERHQKAVLTAMGFSNSIHWLAWY-----TKSMLLLLLCLLIMISIFSIG 276
            |....::|.:.:|.|||:..|.....||..|.|.|:.::     ...:::||:|:|:.:.|....
Mouse   261 FSSIVLSIMRSIVFEKEKRLKEYQLIMGLRNWIIWIGYFFTFFPLYVIIILLICILLFVQIVEEP 325

  Fly   277 LIYEFSSLVCLMTIFLVYIHSLVLFAFFISSFFSRSLSAVVATILMYFSTALPFLIV----GAEN 337
            :: .:|....:......|..:.:.|||.:|:|||::..|..|..|::|::..|:..:    |..|
Mouse   326 IL-RYSDCSFIFVFLTCYAIASICFAFMVSTFFSKTRLAASAGNLLFFASFFPYNFISEYYGMLN 389

  Fly   338 SSVAAQTAASIGLNSALFYILDSVAVMEMQSVGAQWYTIDNTASSGYKLSIVGYMLIMISI-SWI 401
              :..:..|.:..|.||...::.:..:|:|.:|.:|:.:...|:....|:. ||||.|:.. :::
Mouse   390 --LTTKITACLSANVALALGINILIKLEIQEIGVKWHNLWTPANLEDNLNF-GYMLGMLLFDAFL 451

  Fly   402 ELLICLYIEAVRTGEFEVPQPWSYPFQRRYWCPLRYGSSVFHQGALLPLAGKNSEGNLPAAHPTR 466
            ..|:..|:|||..|:..|||||.:...|.||    :|.         |...|.:|    .|..| 
Mouse   452 YSLVTWYVEAVFPGQCGVPQPWYFFLMRSYW----FGK---------PKIRKTTE----EAKCT- 498

  Fly   467 QPIIYLDDRTQENFQRVNISKKIGIEVRSLSKTFGFRNVVKDLFFNVYENEITALVGHKGSGKTT 531
             ||::      ..::....:.:.||.:..|.|.|..:..|.:|..|:||.::|.|:||.|:||||
Mouse   499 -PIVH------NCYEAEPPNLEAGIHIMHLHKEFKNKPAVNNLSLNIYEGQVTVLLGHNGAGKTT 556

  Fly   532 IIMMLCGILQPTTGTVLINGYDIVTEAKVAKSSLGICPQHSVIFKGMSARDHIYFFSRVKGYNKT 596
            .:.:|.|....|.|...||||:|.......:..||.||||.::|..::..:|::|:..|||..:.
Mouse   557 TLSVLTGRFAATRGEAYINGYNISDNMIEVRKDLGFCPQHDLLFDDLTLSEHLFFYCMVKGIPQN 621

  Fly   597 EAMMESNIYISKLGLVDSQKWDAMRLSPGNQRRLSLACALCAGSKVILCDEPSSGLDPIGRHELM 661
            ....|.:..:|...|.::....:...|.|.:|:||:..||.|||||::.||||||:||:.|....
Mouse   622 INCEEIDRMLSAFNLQENYHTLSGSASGGVRRKLSIVLALMAGSKVVILDEPSSGMDPVSRRATW 686

  Fly   662 RFLQKEKHGRTILMTTQQLEEGEILADRIAIMNDGQILCYGTLGYLKQLPFTSYTLSCQMAPNSK 726
            ..||..||.||||:||..::|.::|.||:|||..|.:.|.|:..:|||:....|.:..:......
Mouse   687 DILQHYKHNRTILLTTHYMDEADVLGDRVAIMVRGTLHCCGSSVFLKQIYGAGYHIVMEKQQYCD 751

  Fly   727 ADNLTDLVRLYMTTTTSPVFHGVDVSYKLPRSQIDRFPEFFQQLEENKKSLNVVSFGVSDSTLDG 791
            .||:..:::.::...........::|:.||:..:.||...|.:||..:|:|.:.|||.|.:|::.
Mouse   752 VDNIIAMIQQHVPGAVLENNIENELSFILPKKYVSRFETLFTELEMRQKALGIASFGASITTMEE 816

  Fly   792 IYLSLDYGQGSSRLRGGADPGVNDKVEFGVQT-------DKAIRTKDRAN-NSLVRYQHQVDPPN 848
            :::.:      ::|   |.|      :..:||       .:.:|..::.| |..:.|    ..||
Mouse   817 VFVKV------NKL---ATP------QKSIQTIQPYYLAYRKMRQDEQQNVNMPINY----SKPN 862

  Fly   849 ETIL--------NTKTPINPIEIWRPIDREKGSCMAQWQAMFIKKKNYTASR---ALIFILILII 902
            ...|        ||..|     ::|          .|:.::|||:..:.:..   .|:.|:::::
Mouse   863 FPYLSEIATVKFNTGVP-----LYR----------QQFYSLFIKRALFISRNWKFMLLQIIVVMV 912

  Fly   903 PLFYYIIVLGTAASEKCAHRTDKQ-PVLPLSLDYY----------SYDDM---------IILLEV 947
            ...|.::.|         |..:.. |...|:|.:|          ...|:         |.|...
Mouse   913 VTTYLLLAL---------HLNNNDIPERELNLSHYGRTIVPYSTSGNSDLALNLTKNLNIFLKSK 968

  Fly   948 DKQLYKSEGEA--YVQLVKEPATVESVDSIFSHLLKAPPIIRRDIKRKYVCGASFNNASTITAWF 1010
            ::.|.|..|:.  |:...|:..|.              .::...||.:       .|.:.:|.:|
Mouse   969 NQNLRKIRGDMNDYILKNKDCHTF--------------CLVALSIKVE-------RNKTVLTIFF 1012

  Fly  1011 NSDAFEHSAPIALNLVYNALGKAVFEDQDFSILVNRGDLHDFIWLNNASSMRRRYKRQNDPDYTD 1075
            |::|: ||..|:|:::.|.|                     |:.|:.                  
Mouse  1013 NNEAY-HSPAISLSILDNIL---------------------FMTLSG------------------ 1037

  Fly  1076 YSDYEIQEYDVVVKPNSSSTSGQHNKSNP---GDDNIITVQ-MSIIEAASTLYNEKGKRKQLFGT 1136
                          |::|.|  ..||..|   ...||:.|. :.|::..:            ||.
Mouse  1038 --------------PDASIT--VFNKPQPLPHYGSNIVPVNGLQIVQCLA------------FGI 1074

  Fly  1137 LIIITAYIALCLSIFSIFVTKERVEHFKMQQEIYGVTLFYFWSTHFVGDFLIYAIYMGALTIAIY 1201
            .:::.:        |||....||....|..|.:.||.:..:|.:..:.| ||:..:...:.:||:
Mouse  1075 SVVVGS--------FSIQTVTERTSQAKHIQFLTGVCVHTYWLSALLCD-LIFFFFACCVLLAIF 1130

  Fly  1202 H------FTIWY---QVVVMLLLIGFACLPFVYLCSLLFSLPNIA---------FAGIFAILVMT 1248
            .      |.:.|   ..:::.:|.|:..:|..|:.|.||:....|         |:.:|:|::.|
Mouse  1131 KFCQLEAFVVHYNFLDTILIFMLYGWCVVPLTYIASFLFNSSTAAYIKITLFNYFSTMFSIIIYT 1195

  Fly  1249 -----GGMLFSFMYMLTLITDVNFTTVFAILPMY---VGTFGLFKCLAWREYCNREVLPPIEELD 1305
                 |....:|:::|       ...:...||.|   :.....|.....:..|.||.....  ||
Mouse  1196 IIQFYGNDFPNFVHIL-------IRAILMALPSYNLAMSISKYFDDYEVKRLCAREFKSIY--LD 1251

  Fly  1306 CK----------FGNCNVFCACKPERTWMEVWLLM------VHC-LVWFIFLWFSNFGYEIGYRF 1353
            |.          ||...:........|...|:||:      |.| |..|:|       ..|.:.|
Mouse  1252 CSDPYTQNNVYGFGEHGIGKFLITLATIGLVFLLLLLSLESVSCSLKSFVF-------RNIIFYF 1309

  Fly  1354 KPKL--------SNRIWHNNEKHIRVLDEERRVGLIPKYEHEDYPIIVDQVTKNY--CRAKNAVQ 1408
            ..||        ||:....:|......::.:...|:.:.::.  |:::::|||.|  |....||:
Mouse  1310 YNKLRKGRNAIPSNQRTKEDEDEDIKKEKGKVFTLLLRLQNT--PLLLNEVTKIYFKCPVVKAVK 1372

  Fly  1409 LVSFAIRPGDTFGLLGAQGAGKTSIFQMIAGETSMSHGNIYVRGHSLREHRNAAKMEVGFCPQGD 1473
            .:|..::..:.|||||..|||||:.|:|:.||.:::.|..::.|:|:.......:..:|:|||.:
Mouse  1373 NISLVVKKSECFGLLGLNGAGKTTTFKMLTGEETITSGIAFIDGNSVTRTPRKIRSRIGYCPQTE 1437

  Fly  1474 NAPKYLTGRQLLRIHCLLHGVPKDHIKAVSEQMAIEFNFKDQLDRPIHTYSGGKKRKLNIALAI- 1537
            :...::|||:.|.::..|.||.:..|....|......:.:...|:.|||||.|.||:|:.|:|: 
Mouse  1438 SVLNHMTGRESLVMYARLWGVLEQDINEYVEAFLHSVHLEPIADQFIHTYSAGSKRRLSTAIALM 1502

  Fly  1538 DSGSVLCLDDTNGSVDHATQRFIWRKLEAVKRSGRPVLLTTQSMEEANAVCSRVAFLVAGEMMFI 1602
            ...||:.||:.:..:|...|..:|..:..:.::|:.:::|:..|||..|:|:|:|.:|.|....:
Mouse  1503 GKSSVVFLDEPSIGMDPVAQHLLWETITWICKTGKAIIITSHRMEECEALCTRLAIMVKGRFTCL 1567

  Fly  1603 GSLQQVRSEVSN--TIVIRLRVNPSDGKLKRRFQQLIADMAELFPLATLHEALETCLIYHININV 1665
            |:.|.||....:  |:.:|:.:...:.|:: .|:..|   ...||.....:.....:.|:|....
Mouse  1568 GTPQHVRKRFGHVYTLTVRINIAKDEDKVE-EFKNFI---KVTFPGNIKFQEFHGTIGYYIPSKE 1628

  Fly  1666 TTLANLFYQMEKIRNEGLLEDYSITQVSLDEIY 1698
            .....:|..:|:.:....|||||:.:|:|::|:
Mouse  1629 IYWGKVFAILEEAKVLFKLEDYSVKRVTLEQIF 1661

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31213NP_001262752.1 ABC2_membrane_3 32..>295 CDD:289468 65/311 (21%)
ABC_subfamily_A 491..708 CDD:213230 83/216 (38%)
drrA 498..796 CDD:130256 102/297 (34%)
ABC2_membrane_3 <1132..1285 CDD:289468 37/178 (21%)
CcmA 1391..1672 CDD:224054 81/285 (28%)
ABC_subfamily_A 1391..1609 CDD:213230 70/220 (32%)
Abca16XP_006507746.1 rim_protein <196..1665 CDD:130324 409/1659 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167838458
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53524
OrthoDB 1 1.010 - - D131191at2759
OrthoFinder 1 1.000 - - FOG0000051
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR19229
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X215
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
76.960

Return to query results.
Submit another query.