DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG31213 and Abca16

DIOPT Version :10

Sequence 1:NP_732473.2 Gene:CG31213 / 42382 FlyBaseID:FBgn0051213 Length:1809 Species:Drosophila melanogaster
Sequence 2:XP_006507746.1 Gene:Abca16 / 233810 MGIID:2388711 Length:1679 Species:Mus musculus


Alignment Length:1853 Identity:447/1853 - (24%)
Similarity:810/1853 - (43%) Gaps:369/1853 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 LLLWKDIKLQ----LTNWVEL--------VMIIFLS-----------------ALMPIFFSIGTK 48
            :||||:..|:    ::...||        :::||.:                 |:||.|.....:
Mouse    11 VLLWKNFTLKKRQIISTSAELLAALLFVIMLLIFRALTDMNIAGPYHFTAQPIAIMPSFIKDAQE 75

  Fly    49 VAKSIFPPDIEMEK---SPGPKSVNTSLFVDLYFTPNNGILEQLITQLANISE-FKSVEVFD--- 106
            ......|.:|::.:   ....:::||::.|..:  |:....|:.|. ..|:|: ..:..|||   
Mouse    76 WELVYIPSEIDVVREIIEDVKRNLNTTIKVRGF--PSEAEFEEYIL-FDNMSQKVLAAIVFDCGF 137

  Fly   107 --TNSELYLQLMINRNAIGIAFPSEWYDIKSCPEVL--NLTIFMP--LSIKRKDFKYFE------ 159
              .:..|.||:..:...:| |..:.|:     |:.|  ...:..|  .||:.::..|.:      
Mouse   138 KNKSDPLPLQVKYHLRFVG-AQRTIWW-----PDKLGWKTRLLFPNHPSIRPRNPNYLDGGSPGY 196

  Fly   160 --SGFLLLQERISKIFIFFKNAGNGK-----IPRVLMNHFPYPSYVPNHYA-ESAKAMTYMTLIS 216
              .|||.:|..:.|..:.:..:..||     |..|: ..|||||:..:... .|:..:..|.::.
Mouse   197 IKEGFLAVQHALDKSIMLYHESSAGKKLFDEIDTVI-QRFPYPSHPQDKLLWISSPFIPLMFILM 260

  Fly   217 FFLPCITIAKYVVAEKERHQKAVLTAMGFSNSIHWLAWY-----TKSMLLLLLCLLIMISIFSIG 276
            |....::|.:.:|.|||:..|.....||..|.|.|:.::     ...:::||:|:|:.:.|....
Mouse   261 FSSIVLSIMRSIVFEKEKRLKEYQLIMGLRNWIIWIGYFFTFFPLYVIIILLICILLFVQIVEEP 325

  Fly   277 LIYEFSSLVCLMTIFLVYIHSLVLFAFFISSFFSRSLSAVVATILMYFSTALPFLIV----GAEN 337
            :: .:|....:......|..:.:.|||.:|:|||::..|..|..|::|::..|:..:    |..|
Mouse   326 IL-RYSDCSFIFVFLTCYAIASICFAFMVSTFFSKTRLAASAGNLLFFASFFPYNFISEYYGMLN 389

  Fly   338 SSVAAQTAASIGLNSALFYILDSVAVMEMQSVGAQWYTIDNTASSGYKLSIVGYMLIMISI-SWI 401
              :..:..|.:..|.||...::.:..:|:|.:|.:|:.:...|:....|:. ||||.|:.. :::
Mouse   390 --LTTKITACLSANVALALGINILIKLEIQEIGVKWHNLWTPANLEDNLNF-GYMLGMLLFDAFL 451

  Fly   402 ELLICLYIEAVRTGEFEVPQPWSYPFQRRYWCPLRYGSSVFHQGALLPLAGKNSEGNLPAAHPTR 466
            ..|:..|:|||..|:..|||||.:...|.||    :|.         |...|.:|    .|..| 
Mouse   452 YSLVTWYVEAVFPGQCGVPQPWYFFLMRSYW----FGK---------PKIRKTTE----EAKCT- 498

  Fly   467 QPIIYLDDRTQENFQRVNISKKIGIEVRSLSKTFGFRNVVKDLFFNVYENEITALVGHKGSGKTT 531
             ||::      ..::....:.:.||.:..|.|.|..:..|.:|..|:||.::|.|:||.|:||||
Mouse   499 -PIVH------NCYEAEPPNLEAGIHIMHLHKEFKNKPAVNNLSLNIYEGQVTVLLGHNGAGKTT 556

  Fly   532 IIMMLCGILQPTTGTVLINGYDIVTEAKVAKSSLGICPQHSVIFKGMSARDHIYFFSRVKGYNKT 596
            .:.:|.|....|.|...||||:|.......:..||.||||.::|..::..:|::|:..|||..:.
Mouse   557 TLSVLTGRFAATRGEAYINGYNISDNMIEVRKDLGFCPQHDLLFDDLTLSEHLFFYCMVKGIPQN 621

  Fly   597 EAMMESNIYISKLGLVDSQKWDAMRLSPGNQRRLSLACALCAGSKVILCDEPSSGLDPIGRHELM 661
            ....|.:..:|...|.::....:...|.|.:|:||:..||.|||||::.||||||:||:.|....
Mouse   622 INCEEIDRMLSAFNLQENYHTLSGSASGGVRRKLSIVLALMAGSKVVILDEPSSGMDPVSRRATW 686

  Fly   662 RFLQKEKHGRTILMTTQQLEEGEILADRIAIMNDGQILCYGTLGYLKQLPFTSYTLSCQMAPNSK 726
            ..||..||.||||:||..::|.::|.||:|||..|.:.|.|:..:|||:....|.:..:......
Mouse   687 DILQHYKHNRTILLTTHYMDEADVLGDRVAIMVRGTLHCCGSSVFLKQIYGAGYHIVMEKQQYCD 751

  Fly   727 ADNLTDLVRLYMTTTTSPVFHGVDVSYKLPRSQIDRFPEFFQQLEENKKSLNVVSFGVSDSTLDG 791
            .||:..:::.::...........::|:.||:..:.||...|.:||..:|:|.:.|||.|.:|::.
Mouse   752 VDNIIAMIQQHVPGAVLENNIENELSFILPKKYVSRFETLFTELEMRQKALGIASFGASITTMEE 816

  Fly   792 IYLSLDYGQGSSRLRGGADPGVNDKVEFGVQT-------DKAIRTKDRAN-NSLVRYQHQVDPPN 848
            :::.:      ::|   |.|      :..:||       .:.:|..::.| |..:.|    ..||
Mouse   817 VFVKV------NKL---ATP------QKSIQTIQPYYLAYRKMRQDEQQNVNMPINY----SKPN 862

  Fly   849 ETIL--------NTKTPINPIEIWRPIDREKGSCMAQWQAMFIKKKNYTASR---ALIFILILII 902
            ...|        ||..|     ::|          .|:.::|||:..:.:..   .|:.|:::::
Mouse   863 FPYLSEIATVKFNTGVP-----LYR----------QQFYSLFIKRALFISRNWKFMLLQIIVVMV 912

  Fly   903 PLFYYIIVLGTAASEKCAHRTDKQ-PVLPLSLDYY----------SYDDM---------IILLEV 947
            ...|.::.|         |..:.. |...|:|.:|          ...|:         |.|...
Mouse   913 VTTYLLLAL---------HLNNNDIPERELNLSHYGRTIVPYSTSGNSDLALNLTKNLNIFLKSK 968

  Fly   948 DKQLYKSEGEA--YVQLVKEPATVESVDSIFSHLLKAPPIIRRDIKRKYVCGASFNNASTITAWF 1010
            ::.|.|..|:.  |:...|:..|.              .::...||.:       .|.:.:|.:|
Mouse   969 NQNLRKIRGDMNDYILKNKDCHTF--------------CLVALSIKVE-------RNKTVLTIFF 1012

  Fly  1011 NSDAFEHSAPIALNLVYNALGKAVFEDQDFSILVNRGDLHDFIWLNNASSMRRRYKRQNDPDYTD 1075
            |::|: ||..|:|:::.|.|                     |:.|:.                  
Mouse  1013 NNEAY-HSPAISLSILDNIL---------------------FMTLSG------------------ 1037

  Fly  1076 YSDYEIQEYDVVVKPNSSSTSGQHNKSNP---GDDNIITVQ-MSIIEAASTLYNEKGKRKQLFGT 1136
                          |::|.|  ..||..|   ...||:.|. :.|::..:            ||.
Mouse  1038 --------------PDASIT--VFNKPQPLPHYGSNIVPVNGLQIVQCLA------------FGI 1074

  Fly  1137 LIIITAYIALCLSIFSIFVTKERVEHFKMQQEIYGVTLFYFWSTHFVGDFLIYAIYMGALTIAIY 1201
            .:::.:        |||....||....|..|.:.||.:..:|.:..:.| ||:..:...:.:||:
Mouse  1075 SVVVGS--------FSIQTVTERTSQAKHIQFLTGVCVHTYWLSALLCD-LIFFFFACCVLLAIF 1130

  Fly  1202 H------FTIWY---QVVVMLLLIGFACLPFVYLCSLLFSLPNIA---------FAGIFAILVMT 1248
            .      |.:.|   ..:::.:|.|:..:|..|:.|.||:....|         |:.:|:|::.|
Mouse  1131 KFCQLEAFVVHYNFLDTILIFMLYGWCVVPLTYIASFLFNSSTAAYIKITLFNYFSTMFSIIIYT 1195

  Fly  1249 -----GGMLFSFMYMLTLITDVNFTTVFAILPMY---VGTFGLFKCLAWREYCNREVLPPIEELD 1305
                 |....:|:::|       ...:...||.|   :.....|.....:..|.||.....  ||
Mouse  1196 IIQFYGNDFPNFVHIL-------IRAILMALPSYNLAMSISKYFDDYEVKRLCAREFKSIY--LD 1251

  Fly  1306 CK----------FGNCNVFCACKPERTWMEVWLLM------VHC-LVWFIFLWFSNFGYEIGYRF 1353
            |.          ||...:........|...|:||:      |.| |..|:|       ..|.:.|
Mouse  1252 CSDPYTQNNVYGFGEHGIGKFLITLATIGLVFLLLLLSLESVSCSLKSFVF-------RNIIFYF 1309

  Fly  1354 KPKL--------SNRIWHNNEKHIRVLDEERRVGLIPKYEHEDYPIIVDQVTKNY--CRAKNAVQ 1408
            ..||        ||:....:|......::.:...|:.:.::.  |:::::|||.|  |....||:
Mouse  1310 YNKLRKGRNAIPSNQRTKEDEDEDIKKEKGKVFTLLLRLQNT--PLLLNEVTKIYFKCPVVKAVK 1372

  Fly  1409 LVSFAIRPGDTFGLLGAQGAGKTSIFQMIAGETSMSHGNIYVRGHSLREHRNAAKMEVGFCPQGD 1473
            .:|..::..:.|||||..|||||:.|:|:.||.:::.|..::.|:|:.......:..:|:|||.:
Mouse  1373 NISLVVKKSECFGLLGLNGAGKTTTFKMLTGEETITSGIAFIDGNSVTRTPRKIRSRIGYCPQTE 1437

  Fly  1474 NAPKYLTGRQLLRIHCLLHGVPKDHIKAVSEQMAIEFNFKDQLDRPIHTYSGGKKRKLNIALAI- 1537
            :...::|||:.|.::..|.||.:..|....|......:.:...|:.|||||.|.||:|:.|:|: 
Mouse  1438 SVLNHMTGRESLVMYARLWGVLEQDINEYVEAFLHSVHLEPIADQFIHTYSAGSKRRLSTAIALM 1502

  Fly  1538 DSGSVLCLDDTNGSVDHATQRFIWRKLEAVKRSGRPVLLTTQSMEEANAVCSRVAFLVAGEMMFI 1602
            ...||:.||:.:..:|...|..:|..:..:.::|:.:::|:..|||..|:|:|:|.:|.|....:
Mouse  1503 GKSSVVFLDEPSIGMDPVAQHLLWETITWICKTGKAIIITSHRMEECEALCTRLAIMVKGRFTCL 1567

  Fly  1603 GSLQQVRSEVSN--TIVIRLRVNPSDGKLKRRFQQLIADMAELFPLATLHEALETCLIYHININV 1665
            |:.|.||....:  |:.:|:.:...:.|:: .|:..|   ...||.....:.....:.|:|....
Mouse  1568 GTPQHVRKRFGHVYTLTVRINIAKDEDKVE-EFKNFI---KVTFPGNIKFQEFHGTIGYYIPSKE 1628

  Fly  1666 TTLANLFYQMEKIRNEGLLEDYSITQVSLDEIY 1698
            .....:|..:|:.:....|||||:.:|:|::|:
Mouse  1629 IYWGKVFAILEEAKVLFKLEDYSVKRVTLEQIF 1661

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31213NP_732473.2 rim_protein <118..1698 CDD:130324 417/1708 (24%)
Abca16XP_006507746.1 rim_protein <196..1665 CDD:130324 409/1659 (25%)

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