DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG31213 and Abca5

DIOPT Version :10

Sequence 1:NP_732473.2 Gene:CG31213 / 42382 FlyBaseID:FBgn0051213 Length:1809 Species:Drosophila melanogaster
Sequence 2:NP_671752.2 Gene:Abca5 / 217265 MGIID:2386607 Length:1642 Species:Mus musculus


Alignment Length:1852 Identity:435/1852 - (23%)
Similarity:783/1852 - (42%) Gaps:367/1852 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 RNLTYCQKYRLLLWKDIKLQLTNWVELVMIIFLSALMPIFFSIGTKVAKSIFP-------PDIEM 60
            |::...::.|.||.|:..::.......|..|    |.|:||.....:...:.|       .|||:
Mouse     6 RDVGVWRQTRTLLLKNYLIKCRTKKSSVQEI----LFPLFFLFWLILVSMMHPNKKYEEVSDIEL 66

  Fly    61 EKSPGPK-SVNTSLFVDLYFTPNNGILEQLITQLA--NISEFKSVEVFDTNSELY-LQLMINRNA 121
              ||..| |::.   |.|.:||...|...::.:::  ::.:....|.:....||. ..|..:.|.
Mouse    67 --SPMDKFSLSN---VILGYTPVTNITSSIMQRVSTDHLPKVIVTEEYANEKELVAASLSKSSNF 126

  Fly   122 IGIAFPSEW-YDIKSCPEVLNL-TIFM----PLSIKRKDFKYFESGFLLLQERISKIFIFFKNAG 180
            :|:.|.... |:::..||::.: :|:|    ..|......:|:..||.:||..|....|..|...
Mouse   127 VGVVFKDTMSYELRFFPEMIPVSSIYMNSREGCSKTCDAAQYWSLGFTVLQASIDAAIIQLKTNV 191

  Fly   181 N-------------GKIPRVLMNHFPYPSYVPNHYAESAKAMTYMTLISFFLPC-ITIAKYVVAE 231
            :             |:...|.::.||             :.:..:.|:..|.|. ..:|.::|||
Mouse   192 SVWSELESTKAVIMGEAAVVEIDTFP-------------RGVILIYLVIAFSPFGYFLAIHIVAE 243

  Fly   232 KERHQKAVLTAMGFSNSIHWLAWYTKSMLLLLLCLLIMISIFSIGLIYEFSSLVCLMTIFLVYIH 296
            ||:..|..|..||..::..||:|......|:.|..|:|..|.:...::..||.:.:..:|.:|..
Mouse   244 KEKKLKEFLKIMGLHDTAFWLSWVLLYASLIFLMSLLMAVIATASSLFPQSSSIVIFLLFFLYGL 308

  Fly   297 SLVLFAFFISSFFSRSLSAVV----ATILMYFSTALPFLIVGAENS-----SVAAQTAASIGLNS 352
            |.|.||..::..|.:|....|    .|::..|...|..||.....|     |...|.|..||:  
Mouse   309 SSVFFALMLTPLFKKSKHVGVVEFFVTVVFGFVGLLIVLIESFPRSLVWLFSPLCQCAFLIGI-- 371

  Fly   353 ALFYILDSVAVMEMQ--SVGAQWYTIDNTASSGYKLSIVGYMLIMISISWIELLICLYIEAVRTG 415
                    ..||.::  :.||   ...|.....|.|.|...||.:.|:.::  |:.:|::.|..|
Mouse   372 --------AQVMHLEDFNEGA---LFSNLTEGPYPLIITIIMLALDSVFYV--LLAVYLDQVIPG 423

  Fly   416 EFEVPQPWSYPFQRRYWCPLRYGSSVFHQGALLPLAGKNSEGNLPAAHPTRQPIIYLDDRTQENF 480
            ||.:.:...|..:..||...:.......:|        |..||: :.:...:|:       ...|
Mouse   424 EFGLRRSSLYFLKPSYWSKNKRNYKELSEG--------NINGNI-SLNEIVEPV-------SSEF 472

  Fly   481 ---QRVNISKKIGIEVRSLSKTFGFRNV--VKDLFFNVYENEITALVGHKGSGKTTIIMMLCGIL 540
               :.:.||   ||:.....||   .||  :::|.|::||.:||||:||.|:||:|::.:|||:.
Mouse   473 IGKEAIRIS---GIQKSYRKKT---ENVEALRNLSFDIYEGQITALLGHSGTGKSTLMNILCGLC 531

  Fly   541 QPTTGTVLINGYDI--VTEAKVAKSSLGICPQHSVIFKGMSARDHIYFFSRVKGYNKTEAMMESN 603
            .|:.|...|.|:.:  :.|...|:..:|||||..:.|..::..:::...:.:||......:.|..
Mouse   532 PPSDGFASIYGHRVSEIDEMFEARKMIGICPQSDINFDVLTVEENLSILASIKGIPANNIIQEVQ 596

  Fly   604 IYISKLGLVDSQKWDAMRLSPGNQRRLSLACALCAGSKVILCDEPSSGLDPIGRHELMRFLQKEK 668
            ..:..|.:...:...|.:||.|.:|:||:..|:....|::|.|||::|:||..||.:...|:..|
Mouse   597 KVLLDLDMQAIKDNQAKKLSGGQKRKLSVGIAVLGNPKILLLDEPTAGMDPCSRHIVWNLLKYRK 661

  Fly   669 HGRTILMTTQQLEEGEILADRIAIMNDGQILCYGTLGYLKQLPFTSYTLSCQMAPNSKADNLTDL 733
            ..|..:.:|..::|.:|||||.|:::.|.:.|.|:..:||......|.||..:......::|:.|
Mouse   662 ANRVTVFSTHFMDEADILADRKAVISQGMLKCVGSSIFLKSKWGIGYRLSMYIDRYCATESLSSL 726

  Fly   734 VRLYMTTTTSPVFHGVDVSYKLPRSQIDRFPEFFQQLEENKKSLNVVSFGVSDSTLDGIYLSLDY 798
            ||.::........:...:.|.||...:|:|...|..|:.: .:|.|:|:|||.:||:.::|.|:.
Mouse   727 VRQHIPAAALLQQNDQQLVYSLPFKDMDKFSGLFSALDIH-SNLGVISYGVSMTTLEDVFLKLEV 790

  Fly   799 GQGSSRLRGGADPGVNDKVEFGVQTDKAIRTKDRANNSLVRYQHQVDPPNETIL---NTK-TPIN 859
                        ....|:.::.|.|.:. |.::..:.|.       |...:::|   .|| :.::
Mouse   791 ------------EAEIDQADYSVFTQQP-REEETDSKSF-------DEMEQSLLILSETKASSVS 835

  Fly   860 PIEIWRPIDREKGSCMAQWQAMFIKKKNYTASRALIFILILI-IPLFYYIIVLGTAASEKCAHRT 923
            .:.:|    :::.|.:|::..:.:|:::.:....|:.:||.. :.:|.:.:           |.:
Mouse   836 TMSLW----KQQVSTIAKFHFLSLKRESKSVRAVLLLLLIFFAVQIFMFFL-----------HHS 885

  Fly   924 DKQPVLPLSLDYYSYDDMIILLEVDKQLYKSEGEAYVQLVKEPATVESVDSIFSHLLKAPPIIRR 988
            .|..|:|:.|    ..|:..|...||. :|.:....:|        .|.||..:.|::       
Mouse   886 FKNAVVPIKL----VPDLYFLKPGDKP-HKYKTSLLLQ--------NSTDSDINGLIE------- 930

  Fly   989 DIKRKYVCGASFNNASTITAWFNSDAFEHSAP--IALNLVYNALGKAVFEDQDFSILVNRGDLHD 1051
                      .|.:.:.:.|.||...:..:||  .|||:|.:.      :|..||.:.|...::.
Mouse   931 ----------FFAHQNIMVAMFNDSDYVSAAPHSAALNVVRSE------KDYVFSAVFNSTMVYC 979

  Fly  1052 FIWLNNASSMRRRYKRQNDPDYTDYSDYEIQEY-DVVVKPNSSSTSGQHNKSNPGDDNIITVQMS 1115
            ...:.|..|....|..........:|...|||. |:|.|                          
Mouse   980 LPVMMNIISNYYLYHLNVTEAIQTWSTPFIQEITDIVFK-------------------------- 1018

  Fly  1116 IIEAASTLYNEKGKRKQLFGTLIIITA---YIALCLSIFSIFVTKERVEHFKM----QQEIYGVT 1173
             ||    ||.:..    |.|  ||:||   |.|:           |..|:.|:    |.::.|:.
Mouse  1019 -IE----LYFQAA----LLG--IIVTAMPPYFAM-----------ENAENHKIKAYTQLKLSGLL 1061

  Fly  1174 LFYFWSTHFVGD----FLIYAIYMGALTIAIYHFTIWYQ---VVVMLLLIGF--ACLPFVYLCSL 1229
            ...:|....|.|    |::..:.:|:| .|.:|...:|.   :.|:..||.:  :.:.|.|:.|.
Mouse  1062 PSAYWVGQAVVDIPLFFVVLILMLGSL-FAFHHGLYFYPAKFLAVVFCLIAYVPSVILFTYIASF 1125

  Fly  1230 LFSLPNIAFAGIFAILVMTGGMLFSFMYMLT-----LITDVNFTTVFAILPMYVGTFGLFKCLAW 1289
            .|.            .::.....:||:|.:|     .||:..|...:|:..::..||    |:| 
Mouse  1126 TFK------------KILNTKEFWSFIYSVTALACVAITETTFFLQYAVTAVFHYTF----CIA- 1173

  Fly  1290 REYCNREVLPPIEELDCKFG-----------NCNVFCACKP-ERTWMEVWLLMVHCLVWFIFLWF 1342
                    :|....|.|...           |.|.:   .| :|..:.|.:..:.|::|...|..
Mouse  1174 --------IPIYPLLGCLISFIKGSWKNMPKNENTY---NPWDRLLVAVIMPYLQCILWIFLLQH 1227

  Fly  1343 SNFGYEIGYRFKPKLSNRIWHNNEKHIRVLDEERRVGLIP-----KYEHEDY------------- 1389
                ||       |:........:...|.|.::.:....|     :.|.||.             
Mouse  1228 ----YE-------KIHGGRSIRKDPFFRALSQKAKNKKFPEPPINEDEDEDVKAERLKVKELMGC 1281

  Fly  1390 -------PIIVDQVTKNYCRAKN----------AVQLVSFAIRPGDTFGLLGAQGAGKTSIFQMI 1437
                   .|:|..:.|.|...|:          |.:.:||.::.|:..||||..||||:::...:
Mouse  1282 QCCEEKPAIMVCNLHKEYDDKKDFLHSRKTTKVATKYISFCVKKGEILGLLGPNGAGKSTVINTL 1346

  Fly  1438 AGETSMSHGNIYV---RGHSLREHRNAAKMEVGFCPQGDNAPKYLTGRQLLRIHCLLHGVPKDHI 1499
            .|:...:.|.|::   ..||..:..:...|  |:|||.:.....||.::...|:..:.|:....:
Mouse  1347 VGDVEPTSGKIFLGDYGSHSSEDDESIKCM--GYCPQTNPLWPDLTLQEHFEIYGAVKGMSPGDM 1409

  Fly  1500 KAVSEQMAIEFNFKDQLDRPIHTYSGGKKRKLNIALA-IDSGSVLCLDDTNGSVDHATQRFIWRK 1563
            |.|..::....:.|:.|.:.:.....|.||||..||: :.:..|..||:.:..:|...::.:||.
Mouse  1410 KEVISRITKALDLKEHLQKTVKKLPAGIKRKLCFALSMLGNPQVTLLDEPSTGMDPRAKQHMWRA 1474

  Fly  1564 LE-AVKRSGRPVLLTTQSMEEANAVCSRVAFLVAGEMMFIGSLQQVRSEVSNTIVIRLRV----- 1622
            :. |.|...|..||||..||||.|||.|||.:|:|::..||::|.::|:......:.:::     
Mouse  1475 IRTAFKNKKRAALLTTHYMEEAEAVCDRVAIMVSGQLRCIGTVQHLKSKFGKGYFLEIKLKDWIE 1539

  Fly  1623 NPSDGKLKRRFQQLIADMAELFPLATLHEALETCLIYHI-NINVTTLANLFYQMEKIRNEGLLED 1686
            |....:|:|..|.       :||.|:..|:..:.|.:.| ..:|.:|:..|.::|:.:....:|:
Mouse  1540 NLEIDRLQREIQY-------IFPNASRQESFSSILAFKIPKEDVQSLSQSFAKLEEAKRTFAIEE 1597

  Fly  1687 YSITQVSLDEIYRIL---NDEEDPNLVDLDST 1715
            ||.:|.:|::::..|   .:|||.:...|.||
Mouse  1598 YSFSQATLEQVFVELTKEQEEEDNSCGTLAST 1629

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31213NP_732473.2 rim_protein <118..1698 CDD:130324 400/1704 (23%)
Abca5NP_671752.2 rim_protein <84..1618 CDD:130324 406/1752 (23%)

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