DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG31213 and Abca9

DIOPT Version :9

Sequence 1:NP_001262752.1 Gene:CG31213 / 42382 FlyBaseID:FBgn0051213 Length:1809 Species:Drosophila melanogaster
Sequence 2:NP_671753.2 Gene:Abca9 / 217262 MGIID:2386796 Length:1623 Species:Mus musculus


Alignment Length:1836 Identity:415/1836 - (22%)
Similarity:777/1836 - (42%) Gaps:344/1836 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 RNLTYCQKYRLLLWKDIKLQLTNWV-------ELVMIIFLSALMPIF-FSIGTKVAKSIFPPDIE 59
            |:|...|:...||.|       ||:       |.::....|.|:.:| :.:.:.:.:....|::.
Mouse     4 RHLRLGQQMWALLCK-------NWLRKFRMRRETLLEWLFSLLLILFVYQLSSNLHQVHDAPEMS 61

  Fly    60 MEKSPGPKSVNTSLFVDLYFTPNNGILEQLITQLANISEFKS---VEVFDTNSELYLQLMINRNA 121
            :.......:.|.|.:: :.|.|.:....:::.::|:....|.   |...|..|...|.|..:.:|
Mouse    62 VVDLGRVDNFNDSNYM-MVFAPESEATHEIMNKVASAPFMKGRTIVACPDEKSMNELDLNYSIDA 125

  Fly   122 IGIAFPSEW-YDIK----------------SCP-EVLNLTIFMPLSIKRKDFKYFESGFLLLQER 168
            :.:.|...: |.:|                |.| |.||..:..      ::..::|.||:..|..
Mouse   126 VRVIFKDTFSYHLKFSWGQRIPKTKEHKDHSAPCEPLNNKMIC------ENSAFWEKGFVAFQAA 184

  Fly   169 ISKIFIFFKNAG------NGKIPRVLMNHFPYPSYVPNHYAESAKA---MTYMTLISFFLPCITI 224
            |        |||      |..:...||:.......:|...|:...|   ..:..:|||    .::
Mouse   185 I--------NAGIIEMITNHSVMEELMSVIGSNMKMPPFIAQGGVATDFFIFFCVISF----SSL 237

  Fly   225 AKYV---VAEKERHQKAVLTAMGFSNSIHWLAWYTKSMLLLLLCLLIMISIFSIGLIYEFSSLVC 286
            ..|:   :.::.::...::..||...|..||:|.......:|:..::|..|.....:...:..:.
Mouse   238 IYYLSVNITQERQYMTTLMAMMGLRESAFWLSWSLMYAGFILVVAVLMSLIVKSAQVVVLTGFMV 302

  Fly   287 LMTIFLVYIHSLVLFAFFISSFFSRS-LSAVVATILMYFSTALPFLIVGAENSSVAAQTAASIGL 350
            :..:||.|..||:..:|.:|....:. |:.:...||..|..:|.|             ||....|
Mouse   303 VFLLFLFYGLSLITLSFLMSVLIKKPFLTGLAIFILTVFWGSLGF-------------TALYKHL 354

  Fly   351 NSALFYILDSVAVMEMQSVGAQWYTID---------NTASSGYKLSIVGYMLIMISISWIELLIC 406
            .:.:.:.|..::.....:..||...:|         |:.::.|.:....:||::.::  :.|::.
Mouse   355 PAFVEWTLCFLSPFAFTTGMAQLIHLDYDVNSNVNLNSPNNSYLIMATLFMLVLDAL--LYLVLA 417

  Fly   407 LYIEAVRTGEFEVPQPWSYPFQRRYWCPLRYGSSVFHQGALLPLAGKNSEGNLPAAHPTRQPIIY 471
            ||.:.:...::...:...:..:..||...|..|.|..:         |...:.|:.:.:.:|:  
Mouse   418 LYFDKITLSKYGHQRSPLFFLKSSYWFKRRGASHVVLE---------NEIDSDPSLNDSLEPV-- 471

  Fly   472 LDDRTQENFQRVNISKKIGIEVRSLSKTF----GFRNVVKDLFFNVYENEITALVGHKGSGKTTI 532
                 ...||     .|..|.:::|.|.:    |....::.|.|::||.:||||:||.|:||||:
Mouse   472 -----SPEFQ-----GKEAIRIKNLKKEYSGKHGKVEALRGLGFDIYEGQITALLGHSGAGKTTL 526

  Fly   533 IMMLCGILQPTTGTVLINGYDI--VTEAKVAKSSLGICPQHSVIFKGMSARDHIYFFSRVKGYNK 595
            |..|.|:..||||:|.|....:  :.::....:..|:|||.:|.|..::.|:::..|:::||...
Mouse   527 INTLSGLSPPTTGSVTIYNQTVSEMDDSDAVLTITGVCPQSNVQFGFLTVRENLRLFAKIKGILP 591

  Fly   596 TEAMMESNIYISKLGLVDSQKWDAMRLSPGNQRRLSLACALCAGSKVILCDEPSSGLDPIGRHEL 660
            .|...|....:..|.:.:.|...|..||.|.:|:|:|..|:....:|:|.|||::||||:.||.:
Mouse   592 HEVEQEVQQVLQDLEMENIQDILAQNLSGGQKRKLTLGIAILGDPQVLLLDEPTAGLDPLSRHRI 656

  Fly   661 MRFLQKEKHGRTILMTTQQLEEGEILADRIAIMNDGQILCYGTLGYLKQLPFTSYTLSCQMAPNS 725
            ...|::.:.||.|:.:||.::|.:|||||...:::|::.|.|:..:||:.....|.||..:....
Mouse   657 WNLLKERRAGRVIVFSTQFMDEADILADRKVFISNGRLKCAGSSLFLKKKWGIGYHLSLHLNEAC 721

  Fly   726 KADNLTDLVRLYMTTTTSPVFHGVDVSYKLPRSQIDRFPEFFQQLEENKKSLNVVSFGVSDSTLD 790
            ..:.:|.||:.:::...........:.|.||..:.::||:.::.|:..... .:..:|||.:||:
Mouse   722 DPEGITSLVKKHISDARLTTQSEERLVYILPLERTNKFPDLYRDLDRCSNQ-GIEDYGVSMTTLN 785

  Fly   791 GIYLSLDYGQGSSRLRGGADPGVNDKVEFGVQTDKAIRTKDRANNSLVRYQHQVDPPNETILNTK 855
            .::|.|   :|.| :...:|.|:..:    :|:|.|     |...|||..:..:     ::.::.
Mouse   786 EVFLKL---EGKS-MADESDVGICGR----LQSDGA-----RDMESLVELEQVL-----SLDSSG 832

  Fly   856 TPINPIEIWRPIDREKGSCMAQWQAMFIKKKNYTASRALIFIL--ILIIP-LFYYIIVLGTAASE 917
            :.::.:.:||.      ...|..:..|.|.||...|...:.:|  |..:| |..:::.       
Mouse   833 SSVSGMALWRQ------QLCAVAKVRFFKLKNERKSLMTVLLLFGISFVPQLLEHLVY------- 884

  Fly   918 KCAHRTDKQPVLPLSLDYYSYDDMIILLEVDKQLYKSEGEAYVQLVKEPATVESVDSIFSHLLKA 982
            |..|::....:.|                  ...:.|.|    |..::|.|         |||  
Mouse   885 KVYHKSYSWGLSP------------------SMYFLSPG----QPPQDPLT---------HLL-- 916

  Fly   983 PPIIRRDIKRKYVCGASFNNASTITAWFNSDAFEHS---APIALNL------------VYNALGK 1032
              :|.|       .|:|.:|            |.|:   ..|||:|            :||....
Mouse   917 --VINR-------TGSSIDN------------FVHALRQQGIALDLDALGTRNGTEEALYNGAIT 960

  Fly  1033 AVFEDQ--DFSILVNRGDLHDFIWLNNASSMRRRYKRQNDPDYTDYSDYEIQEYDVVVKPNSSST 1095
            .:.|::  .||:..|...|:.|..|                            .|::    |:..
Mouse   961 VLGEEKALRFSVACNAKRLNCFPVL----------------------------MDII----SNGL 993

  Fly  1096 SGQHNKSNPGDDNIITVQMSIIEAASTLYNEKGKRKQLFGTLII---ITAYIALCLSIFSIFVTK 1157
            .|..|.|    :.|.|.:.::.| ...|| |.|.....|..:.:   :|.|||:    .||...|
Mouse   994 LGIFNSS----ERIQTDRSTVFE-EHMLY-EYGFMSNAFFWIPVAASLTPYIAM----GSISDHK 1048

  Fly  1158 ERVEHFKMQQEIYGVTLFYFWSTHFVGDFLIYAIYMGALTIAIYHFTIWYQVVVM-LLLIGFACL 1221
            ::|   ..|....|:....:|....:.|..||.:.:..:.|....|:....:.|| .|||...| 
Mouse  1049 KKV---LSQLWTSGLYPSAYWCGQALVDIPIYFLILFLMQIMDSVFSSEEFISVMESLLIQIPC- 1109

  Fly  1222 PFVYLCSLLFSLPNIAFAGIFAILVMTGGMLFSFMYMLTLI-----TDVNFTTVFAILPMYVGTF 1281
            ...|..||:|....|:|  ||.......| ::||.:::..|     ||:|   .:..|.:.:.||
Mouse  1110 SIGYASSLIFMTYVISF--IFRNGRKNSG-IWSFFFLIVTIFFIIATDIN---EYGFLELLICTF 1168

  Fly  1282 GLFKCLAWREYCNREVLPPIEEL-------DCKFGNCNVFCACKPERTWMEVWLLMVHCLVWFIF 1339
                           ::||...:       :..:.:.:.....:.:..::.:.:..:|.|::|..
Mouse  1169 ---------------LVPPFTLIGSLLIFSEVSYDSVDYLGTSESQLVFLALLIPYLHFLLFFFI 1218

  Fly  1340 L-WFSNF----------GYEIGYRFKPKLSNRIWHNNEKHIRVLDEERRVGLIPKYEHEDYPIIV 1393
            | ....:          .:.|..|..|.:.|......|.....::..|..|.:...:.::.|:|:
Mouse  1219 LRCLERYLRKKSLRVDPVFRISPRSCPAVPNPEEPGEEDEDVQMERVRTTGAMATLQTDEKPVII 1283

  Fly  1394 DQ-VTKNY------C----RAKNAVQLVSFAIRPGDTFGLLGAQGAGKTSIFQMIAGETSMSHGN 1447
            .. :.|.|      |    :.|.|.:.:||.::.|:..||||..||||::...||.|:|..:.|.
Mouse  1284 ASCLRKEYIGRTKRCFSKMKKKIATRNISFCVKKGEVLGLLGHNGAGKSTTISMITGDTIPTAGQ 1348

  Fly  1448 IYVRGHSLREHRNAAKMEVGFCPQGDNAPKYLTGRQLLRIHCLLHGVPKDHIKAVSEQMAIEFNF 1512
            ::::|..    ..||...:|:|||.:.....||.::.|.::..:.|:.|........::......
Mouse  1349 VFLKGSG----GGAALGFLGYCPQENVLWPNLTVKEHLELYAAVKGLKKKDAVVTITRLVNALKL 1409

  Fly  1513 KDQLDRPIHTYSGGKKRKLNIALAI-DSGSVLCLDDTNGSVDHATQRFIWRKLEAV-KRSGRPVL 1575
            :|.|...:.|.|.|.||||...|:| .:..|:.||:.:..:|...|:.:|:.:.|. ..:.|..|
Mouse  1410 QDHLKALVRTLSEGVKRKLCFVLSILGNPPVVLLDEPSTGMDPEGQQQMWQAIRATFTNTERGAL 1474

  Fly  1576 LTTQSMEEANAVCSRVAFLVAGEMMFIGSLQQVRSEVSNTIVIRLRVNPSDGKLKRRFQQLIADM 1640
            |||..|.||.|||.|||.:|:|.:..|||:|.::|:.....::.::|     |...:.:.|..::
Mouse  1475 LTTHYMAEAEAVCDRVAIMVSGRLRCIGSIQHLKSKFGKDYLLEMKV-----KTPSQVEPLNTEI 1534

  Fly  1641 AELFPLATLHEALETCLIYHINI-NVTTLANLFYQMEKIRNEGLLEDYSITQVSLDEIYRILNDE 1704
            ..|||.|...|...:.::|.:.: :|..|:..|:::|:::....||:||::|.:|::::..|:.|
Mouse  1535 MRLFPQAARQERYSSLMVYKLPVEDVRPLSEAFFKLERLKENFDLEEYSLSQSTLEQVFLELSKE 1599

  Fly  1705 EDPNLVDLDSTHNSEV 1720
            ::  |.|.....||.|
Mouse  1600 QE--LDDFGEEANSSV 1613

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31213NP_001262752.1 ABC2_membrane_3 32..>295 CDD:289468 53/296 (18%)
ABC_subfamily_A 491..708 CDD:213230 76/222 (34%)
drrA 498..796 CDD:130256 94/303 (31%)
ABC2_membrane_3 <1132..1285 CDD:289468 41/161 (25%)
CcmA 1391..1672 CDD:224054 84/294 (29%)
ABC_subfamily_A 1391..1609 CDD:213230 72/230 (31%)
Abca9NP_671753.2 rim_protein <128..1600 CDD:130324 384/1687 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167838470
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D131191at2759
OrthoFinder 1 1.000 - - FOG0000051
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.940

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