DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG31213 and Abca8a

DIOPT Version :10

Sequence 1:NP_732473.2 Gene:CG31213 / 42382 FlyBaseID:FBgn0051213 Length:1809 Species:Drosophila melanogaster
Sequence 2:XP_006533124.3 Gene:Abca8a / 217258 MGIID:2386846 Length:1653 Species:Mus musculus


Alignment Length:1867 Identity:432/1867 - (23%)
Similarity:777/1867 - (41%) Gaps:432/1867 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MNRNLTYCQKYRLLLWKDI----KLQLTNWVE--------LVMIIFLSALMPIFFSIGTKVAKSI 53
            :.|.:..||:...||.|::    :|:...::|        |.:|:||.......||       |:
Mouse    36 VKREINVCQQTWALLCKNLLRKKRLKRDTFLEFLYTALILLSLILFLQLHEVYDFS-------SL 93

  Fly    54 FPPDIEMEKSPGPKSVNTSLFVDLYFTPNNGILEQLITQLANISEFKSVEVF-DTNSELYLQLMI 117
              ||:::.:.   .|.|.|.|:.:| ||.....::::.:::.:|.....::. ..|.|...:|:.
Mouse    94 --PDVDLGRI---DSFNDSTFMIVY-TPITPTTQRIMDRVSLVSYMTGRKILASPNEENMTELIS 152

  Fly   118 NR--NAIGIAFPSEW-YDIK---------------------SCPEVLNLTIFMPLSIKRKDFKYF 158
            .|  :.:|:.|.:.: |::|                     |..|:    |:..||      :::
Mouse   153 MRFSDVVGVIFTNAYSYNLKFIKGARIPTIKEHQDHTAHCHSYGEI----IYCGLS------EFW 207

  Fly   159 ESGFLLLQERISKIFIFFKNAGNGKIPRVLMNHFPYPSYVPNHYAESAKAMT--YMTLISF---- 217
            ..||:.||..|           |..|..|..||         ...|...::|  |:.:.||    
Mouse   208 RDGFVALQAAI-----------NAAIIEVTTNH---------SVMEEMMSLTGKYIKIDSFVGQE 252

  Fly   218 --------------FLPCITIAKYVVAEKERHQKAVLTAMGFSNSIHWLAWYTKSMLLLLLCLLI 268
                          |.|........|..:.:..|.::..||..:|..||:|.....:::.:..|:
Mouse   253 GTTTDCFLFFCIIRFSPLTYYISAGVTRERKKMKGLMAVMGLRDSAFWLSWGLLYGVIVFVVTLL 317

  Fly   269 MISIFSIGLIYEFSSLVCLMTIFLVYIHSLVLFAFFISSFFSRS-LSAVVATIL------MYFST 326
            ..:|..:......:..:.:.::|..|..||:..:|.:|....:| |:.:|..:|      :.|:.
Mouse   318 STTIVKLVQFVFLTGFMVIFSLFFFYGLSLISLSFLMSVLLKKSFLTDLVVFLLTVSCGSLGFTA 382

  Fly   327 ALPFLIVGAENSSVAAQTAASIGLNSALFYILDSVAVMEMQSVGAQWYTIDNTAS-SGYKLSIVG 390
            ...:|.|..|         ..:.|.|...::|..|.::.:.      |.:::.|. .|....::|
Mouse   383 LYRYLPVSLE---------WLLSLLSPFAFMLGMVQLLRLD------YDVNSNADPMGNPNEVIG 432

  Fly   391 YMLIMISISWIELLICLYIEAVRTGEFEVPQPWSYPFQRRYWCPLRYGSSVFHQGALLPLAGKNS 455
            .:.::.......||:..|.|.|...|:....|..:..:..:|                  :|:| 
Mouse   433 TIFMLFFDGVFYLLLTFYFEKVLPSEYGRRHPPLFFLKSSFW------------------SGQN- 478

  Fly   456 EGNLPAAHPTRQPIIYLDDRT-----QENFQRVNIS--KKIGIEVRSLSKTFGFRN----VVKDL 509
                ||....      ||:.|     .::|:.|::.  .|..|.:|:|:|.:..::    .:|||
Mouse   479 ----PANRTA------LDNETDYEFSDDSFEPVSMEFHGKEAIRIRNLTKDYIQKSKRTEALKDL 533

  Fly   510 FFNVYENEITALVGHKGSGKTTIIMMLCGILQPTTGTVLI--NGYDIVTEAKVAKSSLGICPQHS 572
            ..:||:.:|||::||.|:||:|::.:|.|:..||.|.|.|  |....:|:.:......|:|||.:
Mouse   534 TLDVYKGQITAILGHSGAGKSTLLNVLSGLCVPTKGWVTIHNNKLSEMTDLENISKLTGVCPQCN 598

  Fly   573 VIFKGMSARDHIYFFSRVKGYNKTEAMMESNIYISKLGLVDSQKWDAMRLSPGNQRRLSLACALC 637
            |.|..::.|:::..|:::||....|...|....:.:|.:.::|......||.|.:|:|:...|:.
Mouse   599 VQFDFLTVRENLRLFAKIKGIQAHEVDNEVQRVLLELDMKNTQNILVQNLSGGQKRKLTFGIAIL 663

  Fly   638 AGSKVILCDEPSSGLDPIGRHELMRFLQKEKHGRTILMTTQQLEEGEILADRIAIMNDGQILCYG 702
            ...::.|.|||::||||..||.:..||::.:..|.:|.:||.::|.:|||||...::.|::.|.|
Mouse   664 GDPQIFLLDEPTAGLDPFSRHRVWNFLKERRADRVVLFSTQFMDEADILADRKVFISKGKLKCAG 728

  Fly   703 TLGYLKQLPFTSYTLSCQMAPNSKADNLTDLVRLYMTTTTSPVFHGVDVSYKLPRSQIDRFPEFF 767
            :..:||:.....|.||.|::.....:.:|.||:.::..:.........:||.||..:.::||:.:
Mouse   729 SSLFLKKKWGIGYHLSLQLSETCVHERITSLVKQHIPDSKLSAESEGKLSYILPLERTNKFPDLY 793

  Fly   768 QQLEENKKSLNVVSFGVSDSTLDGIYLSLDYGQGSSRLRGGADPGVNDKVEFGVQTDKAIRTKDR 832
            :.||.: ..|.:.::|||.:||..::|.|   :|.|.: ..:|.|:.:.|:.|     ..|:.:|
Mouse   794 RDLERS-PDLGIENYGVSITTLTEVFLKL---EGKSSI-DQSDIGMTEDVQAG-----GARSPER 848

  Fly   833 ANNSLVRYQHQVDPPNETILNTKTPINPIEIWRPIDREKGSCMAQWQAM-------FIKKKNYTA 890
                ....:..|     ::||.:.            :.||.....||.:       |:|.|:   
Mouse   849 ----FAEVEQLV-----SLLNGRC------------KMKGGMALWWQQLCAVTRLRFLKLKH--- 889

  Fly   891 SRALIFILILIIPL---------FYYIIVLGTAASEKCAH----RTDKQPVLPLS---------- 932
            .|..|.||||::.:         .|.::.......|...|    ...:||..||:          
Mouse   890 ERKSIVILILVLGIGLLHILSANIYRMVRQSDYCWELAPHMYFLTPGQQPQPPLTNLLIVNKTGA 954

  Fly   933 -LD--YYSYDDMIILLEVDKQLYKSEGEAYVQLVKEPATVESVDSIFSHLLKAPPIIRRDIKRKY 994
             :|  .:|.:...|.||||....::..|               ||.::..:    |:..|.|   
Mouse   955 KIDDFIHSLEQQNIALEVDAFGTRNGTE---------------DSQYNGAI----ILSGDEK--- 997

  Fly   995 VCGASFN-----NASTITAWFNSDAFEHSAPIALNLVYNALGKAVFEDQDFSILVNRGDLHDFIW 1054
                ::|     |...:..:          |:.:::|.|.| ..:|                   
Mouse   998 ----NYNFTLACNTKRLNCF----------PVLVDIVSNGL-LGLF------------------- 1028

  Fly  1055 LNNASSMRRRYKRQNDPDYTDYSDYEIQEYDVV-------VKPNSSSTSGQHNKSNPGDDNIITV 1112
               |.|...:..|...|:..|:..::...|..:       |.|..|.||....|      |....
Mouse  1029 ---APSAHIQTDRSTFPEENDHRKFDYLAYFFLWVLLMACVPPYISMTSIDDYK------NRAQF 1084

  Fly  1113 QMSIIEAASTLYNEKGKRKQLFG-TLIIITAYIALCLSIFSIFVTKERVEHFKMQQEIYGVTLFY 1176
            |:.|...:.:.|        .|| .|..:..|.||.||||..|......|               
Mouse  1085 QLWISGLSPSAY--------WFGQALFEVPVYCALILSIFIAFYASAPPE--------------- 1126

  Fly  1177 FWSTHFVGDFLIYAIYMGALTIAIYHFTIWYQVVVMLLLIGFACLPFVY--------LCSLLFSL 1233
              |...|||..|..:|:|...:::...|.              .:.|:|        |.||.|.:
Mouse  1127 --SKFTVGDLFIQILYVGGYAMSVIFMTY--------------VISFIYRKGRKNSGLWSLCFYI 1175

  Fly  1234 PNIAFAGIFAILVMTGGMLFSFMYML-TLITDVNFTTVFAILPMYVGTFGLFKCLAWREYCNREV 1297
              ::|              ||..:|| ....|::...:.|::|  ..|.|....|   .:.|||.
Mouse  1176 --VSF--------------FSMCFMLIDYFRDISLFVLIALVP--PATLGGCTLL---HFENREF 1219

  Fly  1298 LPPIEELDCKFGNCNVFCACKPERTWMEVWLL--MVHCLVWFIFL--WFSNFGYEI-----GYRF 1353
            ...|.|               |||.:..::.|  ::|..::.:.|  ....||.:.     .:|.
Mouse  1220 SEIIFE---------------PEREYSYLFFLAPLLHFAIFVVILRCMERKFGMKTMRTDPVFRI 1269

  Fly  1354 KPKLSNRIWHNNEK---HIRVLDEER--RVGLIPKYEHEDYP-IIVDQVTKNY-----C-----R 1402
            .|: |:|:::|.|.   ....:.:||  ....:...:.::.| ||...:.|.|     |     :
Mouse  1270 SPR-SDRVFNNPEDPDGEDEDVSQERVWTANALTSADFQEKPAIIASCLRKEYKGKKKCFVLKSK 1333

  Fly  1403 AKNAVQLVSFAIRPGDTFGLLGAQGAGKTSIFQMIAGETSMSHGNIYVRGHSLREHRNAAKMEVG 1467
            .|.|.:.:||.:|.|:..||||..||||::..:||.|||..|.|.:.::|.|..:....    :|
Mouse  1334 KKIATRNISFCVRKGEVVGLLGHNGAGKSTSIKMITGETKPSAGQVLLKGSSTGDTPGF----LG 1394

  Fly  1468 FCPQGDNAPKYLTGRQLLRIHCLLHGVPKDHIKAVSEQMAIEFNFKDQLDRPIHTYSGGKKRKLN 1532
            :|||.:.....||.|:.|.|...:.|:.|.......|::|.....:|||..|:.|.|.|.||||.
Mouse  1395 YCPQENALWLNLTVREHLEIFAAIKGMRKSDANVAIERLADALKLQDQLKSPVKTLSEGVKRKLC 1459

  Fly  1533 IALAI-DSGSVLCLDDTNGSVDHATQRFIWRKLEAV-KRSGRPVLLTTQSMEEANAVCSRVAFLV 1595
            ..|:| .:.||:.||:.:..:|...|:.:|:.::|. ..:.|..||||..|.||.|||.|||.:|
Mouse  1460 FVLSILGNPSVVLLDEPSTGMDPEGQQQMWQAIQATFSNTERGALLTTHYMAEAEAVCDRVAIMV 1524

  Fly  1596 AGEMMFIGSLQQVRSEVSNTIVIRLRVNPSDGKLKRRFQQLIADMAELFPLATLHEALETCLIYH 1660
            :|.:..|||:|.::|:.....::.::|     |...:.:.|..::..|||.|...|...:.::|.
Mouse  1525 SGRLRCIGSIQHLKSKFGKEYLLEMKV-----KTPSQVEPLNTEIMRLFPQAARQERYSSLMVYK 1584

  Fly  1661 I-NINVTTLANLFYQMEKIRNEGLLEDYSITQVSLDEIYRILNDEED 1706
            : ..:|..|:..|:::|.::....||:||::|.:|::::..|:.|::
Mouse  1585 LPREDVQPLSQAFFKLETVKQSFDLEEYSLSQSTLEQVFLELSKEQE 1631

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31213NP_732473.2 rim_protein <118..1698 CDD:130324 402/1727 (23%)
Abca8aXP_006533124.3 rim_protein <258..1630 CDD:130324 378/1599 (24%)

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