DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG31213 and Abcg4

DIOPT Version :9

Sequence 1:NP_001262752.1 Gene:CG31213 / 42382 FlyBaseID:FBgn0051213 Length:1809 Species:Drosophila melanogaster
Sequence 2:NP_620405.3 Gene:Abcg4 / 192663 MGIID:1890594 Length:646 Species:Mus musculus


Alignment Length:271 Identity:63/271 - (23%)
Similarity:123/271 - (45%) Gaps:34/271 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   468 PIIYLDDRTQENF----QRV-NISKKIGIEVRSLSKTF-----------GFRNVVKDLFFNVYEN 516
            |::....:..||.    ||. ::.|:..:::..:..::           |::.::|.|.......
Mouse    31 PVLTTHLKKVENHITEAQRFSHLPKRSAVDIEFVELSYSVREGPCWRKRGYKTLLKCLSGKFCRR 95

  Fly   517 EITALVGHKGSGKTTIIMMLCGILQP-TTGTVLINGYDIVTEAKVAKSSLGICPQHSVIFKGMSA 580
            |:..::|..|:||:|.:.:|.|..:. ..|.:|:||..  .|.:..:.......|..::...::.
Mouse    96 ELIGIMGPSGAGKSTFMNILAGYRESGMKGQILVNGRP--RELRTFRKMSCYIMQDDMLLPHLTV 158

  Fly   581 RDHIYFFSRVKGYNKTEAMME--SNIYISKLGLVDSQKWDAMRLSPGNQRRLSLACALCAGSKVI 643
            .:.:...:.:|...|.|...|  :.| ::.|||:.........||.|.::||::|..|.....|:
Mouse   159 LEAMMVSANLKLSEKQEVKKELVTEI-LTALGLMSCSHTRTALLSGGQRKRLAIALELVNNPPVM 222

  Fly   644 LCDEPSSGLDPIGRHELMRFLQKEKH-GRTILMTTQQ----LEEGEILADRIAIMNDGQILCYGT 703
            ..|||:||||.....:::..::...| |||::.|..|    |.|   :.|::.|::.||.:..|.
Mouse   223 FFDEPTSGLDSASCFQVVSLMKSLAHGGRTVICTIHQPSAKLFE---MFDKLYILSQGQCIFKGV 284

  Fly   704 ----LGYLKQL 710
                :.|||.|
Mouse   285 VTNLIPYLKGL 295

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31213NP_001262752.1 ABC2_membrane_3 32..>295 CDD:289468
ABC_subfamily_A 491..708 CDD:213230 54/239 (23%)
drrA 498..796 CDD:130256 57/236 (24%)
ABC2_membrane_3 <1132..1285 CDD:289468
CcmA 1391..1672 CDD:224054
ABC_subfamily_A 1391..1609 CDD:213230
Abcg4NP_620405.3 3a01204 44..646 CDD:273361 60/258 (23%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
11.000

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