DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG31213 and wht-1

DIOPT Version :9

Sequence 1:NP_001262752.1 Gene:CG31213 / 42382 FlyBaseID:FBgn0051213 Length:1809 Species:Drosophila melanogaster
Sequence 2:NP_001348731.1 Gene:wht-1 / 175859 WormBaseID:WBGene00015479 Length:671 Species:Caenorhabditis elegans


Alignment Length:877 Identity:160/877 - (18%)
Similarity:286/877 - (32%) Gaps:320/877 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   467 QPIIYLDDRTQENFQRVNISKKIGIEVRSLSKTFGFRN-----VVKDLFFNV----YENEITALV 522
            ||::  .:.....:..:|::   |.|.:..:....|||     .||::..||    ...::.|::
 Worm    40 QPVV--PEGCNLYWSSLNVT---GPETKPTNFVDRFRNNMPKRRVKEILHNVSGMAESGKLLAIL 99

  Fly   523 GHKGSGKTTIIMMLCG---ILQPTTGTVLINGYDIVTEAKVAKSSLGICPQHSVIFKGMSARDHI 584
            |..|:||||::.:|..   ......|::||:|.. ..:.|:.:.| ....||.:....|:||:|:
 Worm   100 GSSGAGKTTLMNVLTSRNLTNLDVQGSILIDGRR-ANKWKIREMS-AFVQQHDMFVGTMTAREHL 162

  Fly   585 YFFSRVK----GYNKTEAMMESNIYISKLGL---------VDSQKWDAMRLSPGNQRRLSLACAL 636
            .|.:|::    .|:..|..:.....::::||         :.:|   ...||.|.::|||.|..:
 Worm   163 QFMARLRMGDQYYSDHERQLRVEQVLTQMGLKKCADTVIGIPNQ---LKGLSCGEKKRLSFASEI 224

  Fly   637 CAGSKVILCDEPSSGLDP-IGRHELMRFLQKEKHGRTILMTTQQLEEGEI-LADRIAIMNDGQIL 699
            ....|::.||||:||||. :..|.:........:|.|:::|..|...... |.:.:.:|..|:::
 Worm   225 LTCPKILFCDEPTSGLDAFMAGHVVQALRSLADNGMTVIITIHQPSSHVYSLFNNVCLMACGRVI 289

  Fly   700 CYGTLGYLKQLPFTSYTLSCQMAPNSKADNLTDLVRLYMTTTTSPVFHGVDVSYKLPRSQIDRFP 764
            ..|                    |..:|               .|:|.  ...|..        |
 Worm   290 YLG--------------------PGDQA---------------VPLFE--KCGYPC--------P 309

  Fly   765 EFFQQLEENKKSLNVVSF--GVSDSTLDGI---YLSLDYGQ------GSSRLRGGADPGVNDKVE 818
            .::...:...::|.|:..  ..|..|:..|   :||.|.||      .:::||..:         
 Worm   310 AYYNPADHLIRTLAVIDSDRATSMKTISKIRQGFLSTDLGQSVLAIGNANKLRAAS--------- 365

  Fly   819 FGVQTDKAIRTKDRANNSLVRYQHQVDPPNETILNTKTPINPIEIWRPIDREKGSCMAQWQAMF- 882
            |...:|.:.:||...|...                                 ..|...|:.|:| 
 Worm   366 FVTGSDTSEKTKTFFNQDY---------------------------------NASFWTQFLALFW 397

  Fly   883 ------IKKKNYTASRALIFILILIIPLFYYIIVLGTAASEKCAHRTDKQPVLPLSLDYYSYDDM 941
                  |:..|..:.|.|..::...|                                       
 Worm   398 RSWLTVIRDPNLLSVRLLQILITAFI--------------------------------------- 423

  Fly   942 IILLEVDKQLYKSEGEAYVQLVKEPATVESVDSI-FSHLLKAPPIIRRDIKRKYVCGASFNNAST 1005
                         .|..:.|....|||:.|::.| |:|:            |.......|.|...
 Worm   424 -------------TGIVFFQTPVTPATIISINGIMFNHI------------RNMNFMLQFPNVPV 463

  Fly  1006 ITAWFNSDAFEHSAPIALNLVYNALGKAVFEDQDFSILVNRGDLHDFI-----------WLNNAS 1059
            |||         ..||.|.  .||.|  |:....:.:..|..:|..:|           |::.. 
 Worm   464 ITA---------ELPIVLR--ENANG--VYRTSAYFLAKNIAELPQYIILPILYNTIVYWMSGL- 514

  Fly  1060 SMRRRYKRQNDPDYTDYSDYEIQEYDVVVKPNSSSTSGQHNKSNPGDDNIITVQMSIIEAASTLY 1124
                         |.::.:|.......::                    |..|.:||..|.:|::
 Worm   515 -------------YPNFWNYCFASLVTIL--------------------ITNVAISISYAVATIF 546

  Fly  1125 NEKGKRKQLFGTLIIITAYIALCLSIFSIFVTKERV-EHFKMQQEIYGVTLFYF----------- 1177
            .....      .:.|:..::...::....|:|.:.: .:||...     :|.||           
 Worm   547 ANTDV------AMTILPIFVVPIMAFGGFFITFDAIPSYFKWLS-----SLSYFKYGYEALAINE 600

  Fly  1178 WSTHFVGDFLIYAIYMGALTIAIYHFTI------WYQVVVMLLLIGFACLPFVYLCSLLFSLPNI 1236
            |.:..|    |...:..::|.    |.:      .:||   |..|.|:....::..|:||.:   
 Worm   601 WDSIKV----IPECFNSSMTA----FALDSCPKNGHQV---LESIDFSASHKIFDISILFGM--- 651

  Fly  1237 AFAGIFAILVMTGGMLFSFMYMLTLITDVNFT 1268
             |.||..|           .|:..||...|.|
 Worm   652 -FIGIRII-----------AYVALLIRSYNNT 671

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31213NP_001262752.1 ABC2_membrane_3 32..>295 CDD:289468
ABC_subfamily_A 491..708 CDD:213230 60/243 (25%)
drrA 498..796 CDD:130256 71/329 (22%)
ABC2_membrane_3 <1132..1285 CDD:289468 30/155 (19%)
CcmA 1391..1672 CDD:224054
ABC_subfamily_A 1391..1609 CDD:213230
wht-1NP_001348731.1 3a01204 76..667 CDD:273361 150/830 (18%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
11.000

Return to query results.
Submit another query.