DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG31213 and Abca2

DIOPT Version :10

Sequence 1:NP_732473.2 Gene:CG31213 / 42382 FlyBaseID:FBgn0051213 Length:1809 Species:Drosophila melanogaster
Sequence 2:XP_006497672.1 Gene:Abca2 / 11305 MGIID:99606 Length:2464 Species:Mus musculus


Alignment Length:2111 Identity:482/2111 - (22%)
Similarity:842/2111 - (39%) Gaps:507/2111 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 NLT-YCQKYRLLLWKDIKLQLTNWVEL----------------------VMIIFLSALMPIF--- 42
            |:| |.|     :|.:|..::.:::|.                      .|.:.|..|.|..   
Mouse   515 NVTHYAQ-----VWLNISTEIRSFLEQGRLQQHLQWLQQYVADLQLHPEAMNLSLEELPPALRQD 574

  Fly    43 FSI--GTKVAKSIFPPDIEMEKSPGPKSVNTSLFVDLY--FTPNNGILEQLITQL--ANISEFKS 101
            ||:  ||.:.:.:   |.....:.|.....:.:.||::  |.....|:...:.|.  .|::.|.|
Mouse   575 FSLPNGTALLQQL---DTIDNAACGWIQFMSKVSVDIFKGFPDEESIVNYTLNQAYQDNVTVFAS 636

  Fly   102 VEVFDTNSELYLQLMINRNAIGIAFPSEWYDIK---SCPEVLNLTIFMPLSIKRKDFK------- 156
            | :|.|..:            |...|...|.|:   |..|..|       .|:|..::       
Mouse   637 V-IFQTRKD------------GSLPPHVHYKIRQNSSFTEKTN-------EIRRAYWRPGPNTGG 681

  Fly   157 --YFESGFLLLQERISKIFIFFKN--AGNGKI-PRVLMNHFPYPSYVPNHYAESAKAMTYMTLIS 216
              ||..||:.:|:.:.:..|   |  .|:..: |...:..||||.|..:         .::.:|.
Mouse   682 RFYFLYGFVWIQDMMERAII---NTFVGHDVVEPGNYVQMFPYPCYTRD---------DFLFVIE 734

  Fly   217 FFLP-CITIA---------KYVVAEKERHQKAVLTAMGFSNSIHWLAWYTKSMLLLLLCLLIMIS 271
            ..:| |:.|:         :::|||||...|.|:..||.:|::||:||:....:.|.:.:..:.:
Mouse   735 HMMPLCMVISWVYSVAMTIQHIVAEKEHRLKEVMKTMGLNNAVHWVAWFITGFVQLSISVTALTA 799

  Fly   272 IFSIGLIYEFSSLVCLMTIFLVYIHSLVLFAFFISSFFSRSLSAVVATILMYFSTALPFL----- 331
            |...|.:...|.::.:.....||..:.::|.|.:|..:|::..|.....::||.:.:|::     
Mouse   800 ILKYGQVLMHSHVLIIWLFLAVYAVATIMFCFLVSVLYSKAKLASACGGIIYFLSYVPYMYVAIR 864

  Fly   332 -------IVGAENSSVAAQTAASIGLNSALFYILDSVAVMEMQSVGAQWYTIDNTASSG--YKLS 387
                   |...|....:..:..:.||.|..|      |:.|:..||.||:|...:...|  :.|.
Mouse   865 EEVAHDKITAFEKCIASLMSTTAFGLGSKYF------ALYEVAGVGIQWHTFSQSPVEGDDFNLL 923

  Fly   388 IVGYMLIMISI-----SWIELLICLYIEAVRTGEFEVPQPWSYPFQRRYWCPLRYGSSVFHQGAL 447
            :...||::.::     :|       |||||..|.:.:|:||.:|.|:.||    .||        
Mouse   924 LAVTMLMVDTVVYGVLTW-------YIEAVHPGMYGLPRPWYFPLQKSYW----LGS-------- 969

  Fly   448 LPLAGKNS--EGNLPAAH-----------------------------PTRQPIIYLDDRTQENFQ 481
                |:..  |.:.|.||                             ||..|::...|:..:.::
Mouse   970 ----GRTEAWEWSWPWAHTPRLSVMEEDQACAMESRHFEETRGMEEEPTHLPLVVCVDKLTKVYK 1030

  Fly   482 RVNISKKIGIEVRSLSKTFGFRNVVKDLFFNVYENEITALVGHKGSGKTTIIMMLCGILQPTTGT 546
            .   .||:.:...||               |:|||::.:.:||.|:||||.:.:|.|:..||:|:
Mouse  1031 N---DKKMALNKLSL---------------NLYENQVVSFLGHNGAGKTTTMSILTGLFPPTSGS 1077

  Fly   547 VLINGYDIVTEAKVAKSSLGICPQHSVIFKGMSARDHIYFFSRVKGYNKTEAMMESNIYISKLGL 611
            ..|.|:||.||....:.:||:||||:|:|..::..:|::|:||:|...:.|...|::..|..|.|
Mouse  1078 ATIYGHDIRTEMDEIRKNLGMCPQHNVLFDRLTVEEHLWFYSRLKSMAQEEIRKETDKMIEDLEL 1142

  Fly   612 VDSQKWDAMRLSPGNQRRLSLACALCAGSKVILCDEPSSGLDPIGRHELMRFLQKEKHGRTILMT 676
            .:.:......||.|.:|:||:|.|...||:.|:.|||::|:||..|..:...:.|.|.|||||::
Mouse  1143 SNKRHSLVQTLSGGMKRKLSVAIAFVGGSRAIILDEPTAGVDPYARRAIWDLILKYKPGRTILLS 1207

  Fly   677 TQQLEEGEILADRIAIMNDGQILCYGTLGYLKQLPFTSYTLS----------------------C 719
            |..::|.::|.|||||::.|::.|.|:..:||......|.|:                      |
Mouse  1208 THHMDEADLLGDRIAIISHGKLKCCGSPLFLKGAYGDGYRLTLVKQPAEPGTSQEPGLASSPSGC 1272

  Fly   720 QMAPNSKADNLTDLVRLYMTTTTSPVFHGVDVSYKLPRSQIDR--FPEFFQQLEENKKSLNVVSF 782
            ....:.....::..:|.::.::........::||.||...:.:  |...|||||.:..:|::.||
Mouse  1273 PRLSSCSEPQVSQFIRKHVASSLLVSDTSTELSYILPSEAVKKGAFERLFQQLEHSLDALHLSSF 1337

  Fly   783 GVSDSTLDGIYL-------SLDYGQGS-SRLRGGADPGVNDKVEFGVQTDKAIRTKDRANN--SL 837
            |:.|:||:.::|       ||:..:.. ...|....||.......|.|.....|..:.|.:  ||
Mouse  1338 GLMDTTLEEVFLKVSEEDQSLENSEADVKESRKDVLPGAEGLTAVGGQAGNLARCSELAQSQASL 1402

  Fly   838 VR-------------------------YQHQVDPPN--------ETILNTKTPINPIEIWRPIDR 869
            ..                         :.:..||.|        |.:.........:|.|     
Mouse  1403 QSASSVGSARGEEGTGYSDGYGDYRPLFDNLQDPDNVSLQEAEMEALAQVGQGSRKLEGW----- 1462

  Fly   870 EKGSCMAQWQAMFIKKKNYTASRALIFILILIIPLFYYIIVLGTAASEKCAHRTDKQPVLPLSLD 934
              ...|.|:..:.:|:.:.....:......:::|.|:..:.:..|.|  .....|..|::.....
Mouse  1463 --WLKMRQFHGLLVKRFHCARRNSKALCSQILLPAFFVCVAMTVALS--VPEIGDLPPLVLSPSQ 1523

  Fly   935 YYSY----DDMIILLEVDKQLYK------SEGEAYVQLVKEPATVESVDSIFSHLLKAP------ 983
            |::|    .:.|.....::|.|:      :..:..|...:.|:.|.:     :.:||:|      
Mouse  1524 YHNYTQPRGNFIPYANEERQEYRLRLSPDASPQQLVSTFRLPSGVGA-----TCVLKSPANGSLG 1583

  Fly   984 PIIRRDIKRKYVCGASFNNASTITAWFNSDAFEHSAPIALNLVYNALGKA-----VFEDQD---- 1039
            |::........:..|.|.::..:      ::|....|:: |.|......|     |..|:|    
Mouse  1584 PMLNLSSGESRLLAARFFDSMCL------ESFTQGLPLS-NFVPPPPSPAPSDSPVSPDEDSLQA 1641

  Fly  1040 --FSILVNRGDLHDFIWLNNASSMRRRYKRQ--------------------NDPD--------YT 1074
              .|:....|   ...| .:|.|:.|.....                    :.|.        .|
Mouse  1642 WNMSLPPTAG---PETW-TSAPSLPRLVHEPVRCTCSAQGTGFSCPSSVGGHPPQMRVVTGDILT 1702

  Fly  1075 DYSDYEIQEYDVVVKPN------SSSTSGQHNKSNPGDDNI----ITVQMSIIEAASTLYNEKGK 1129
            |.:.:.:.||.:.....      .:.|.|...||.|.....    :..::::...|..|||.||.
Mouse  1703 DITGHNVSEYLLFTSDRFRLHRYGAITFGNVQKSIPASFGARVPPMVRKIAVRRVAQVLYNNKGY 1767

  Fly  1130 RKQ-----------------------------------------------LFGTLIIITAYIALC 1147
            ...                                               |.||.::|..:|.:.
Mouse  1768 HSMPTYLNSLNNAILRANLPKSKGNPAAYGITVTNHPMNKTSASLSLDYLLQGTDVVIAIFIIVA 1832

  Fly  1148 LSI----FSIFVTKERVEHFKMQQEIYGVTLFYFWSTHFVGDFLIYAIYMGALTIAIYHF----- 1203
            :|.    |.:|:..|:....|..|.:.|.....:|..::|.|.|.|.:......|.::.|     
Mouse  1833 MSFVPASFVVFLVAEKSTKAKHLQFVSGCNPVIYWLANYVWDMLNYLVPATCCVIILFVFDLPAY 1897

  Fly  1204 ---TIWYQVVVMLLLIGFACLPFVYLCSLLFSLPNIAFAGIFAILVMTGGMLFSFMYMLTL---- 1261
               |.:..|:.:.||.|::..|.:|..|..|.:|:.|:..:..|.:..|.......::|.|    
Mouse  1898 TSPTNFPAVLSLFLLYGWSITPIMYPASFWFEVPSSAYVFLIVINLFIGITATVATFLLQLFEHD 1962

  Fly  1262 ----ITDVNFTTVFAILPMYVGTFGLFKCLAWREYCNREVLPPIEELDCKFGNCNVFCACKPERT 1322
                :.:....:.|.|.|.|....||.: :|:.||.|        |...|.|.   |...|....
Mouse  1963 KDLKVVNSYLKSCFLIFPNYNLGHGLME-MAYNEYIN--------EYYAKIGQ---FDKMKSPFE 2015

  Fly  1323 WMEVW----LLMVHCLVWFIFLWFSNFGY-----EIGYRFKPKLSNRIWHNNEKHIRVLDEERRV 1378
            |..|.    .:.|...|.|.......:.:     .:....||.         |..:.|..|.:||
Mouse  2016 WDIVTRGLVAMTVEGFVGFFLTIMCQYNFLRQPQRLPVSTKPV---------EDDVDVASERQRV 2071

  Fly  1379 GLIPKYEHEDYPIIVDQVTKNYCRAK----NAVQLVSFAIRPGDTFGLLGAQGAGKTSIFQMIAG 1439
               .:.:.::..:.::.:||.|...|    .||..:...:|||:.|||||..||||||.|:|:.|
Mouse  2072 ---LRGDADNDMVKIENLTKVYKSRKIGRILAVDRLCLGVRPGECFGLLGVNGAGKTSTFKMLTG 2133

  Fly  1440 ETSMSHGNIYVRGHSLREHRNAAKMEVGFCPQGDNAPKYLTGRQLLRIHCLLHGVP-KDHIKAVS 1503
            :.|.:.|..:|.|||:.:.....:..:|:|||.|.....||.|:.|:::..|.|:| ||..:.| 
Mouse  2134 DESTTGGEAFVNGHSVLKDLLQVQQSLGYCPQFDALFDELTAREHLQLYTRLRGIPWKDEAQVV- 2197

  Fly  1504 EQMAIE-FNFKDQLDRPIHTYSGGKKRKLNIALA-IDSGSVLCLDDTNGSVDHATQRFIWRKLEA 1566
             :.|:| .......|:|..|||||.||||:.|:| |...:.:.||:....:|...:||:|..:..
Mouse  2198 -KWALEKLELTKYADKPAGTYSGGNKRKLSTAIALIGYPAFIFLDEPTTGMDPKARRFLWNLILD 2261

  Fly  1567 VKRSGRPVLLTTQSMEEANAVCSRVAFLVAGEMMFIGSLQQVRSEVSNTIVIRLRVNPSDGKLKR 1631
            :.::||.|:||:.||||..|:|:|:|.:|.|.:..:||:|.:::...:..:|.:|...|      
Mouse  2262 LIKTGRSVVLTSHSMEECEALCTRLAIMVNGRLRCLGSIQHLKNRFGDGYMITVRTKSS------ 2320

  Fly  1632 RFQQLIADMAEL----FPLATLHEALETCLIYHININVTTLANLFYQMEKIRNEGLLEDYSITQV 1692
               |.:.|:...    ||.|.|.|...|.:.|.:.....:||.:|.:||::.....:||||::|.
Mouse  2321 ---QNVKDVVRFFNRNFPEAMLKERHHTKVQYQLKSEHISLAQVFSKMEQVVGVLGIEDYSVSQT 2382

  Fly  1693 SLDEIYRILNDEEDPNLVDLDSTHNS------------------EVLEDIRDTTRDTTRGTTRDT 1739
            :||.::.....::..|:...::..:|                  |:...:.|...|.   .|.|.
Mouse  2383 TLDNVFVNFAKKQSDNVEQQEAEPSSLPSPLGLLSLLRPRPAPTELRALVADEPEDL---DTEDE 2444

  Fly  1740 NLVSDEGIQKEKVKRKKVEEEDRDRQESTET 1770
            .|:|             .|||......:|:|
Mouse  2445 GLIS-------------FEEERAQLSFNTDT 2462

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31213NP_732473.2 rim_protein <118..1698 CDD:130324 440/1873 (23%)
Abca2XP_006497672.1 rim_protein 58..2398 CDD:130324 468/2029 (23%)

Return to query results.
Submit another query.