DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG31213 and Abca2

DIOPT Version :9

Sequence 1:NP_001262752.1 Gene:CG31213 / 42382 FlyBaseID:FBgn0051213 Length:1809 Species:Drosophila melanogaster
Sequence 2:XP_006497672.1 Gene:Abca2 / 11305 MGIID:99606 Length:2464 Species:Mus musculus


Alignment Length:2111 Identity:482/2111 - (22%)
Similarity:842/2111 - (39%) Gaps:507/2111 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 NLT-YCQKYRLLLWKDIKLQLTNWVEL----------------------VMIIFLSALMPIF--- 42
            |:| |.|     :|.:|..::.:::|.                      .|.:.|..|.|..   
Mouse   515 NVTHYAQ-----VWLNISTEIRSFLEQGRLQQHLQWLQQYVADLQLHPEAMNLSLEELPPALRQD 574

  Fly    43 FSI--GTKVAKSIFPPDIEMEKSPGPKSVNTSLFVDLY--FTPNNGILEQLITQL--ANISEFKS 101
            ||:  ||.:.:.:   |.....:.|.....:.:.||::  |.....|:...:.|.  .|::.|.|
Mouse   575 FSLPNGTALLQQL---DTIDNAACGWIQFMSKVSVDIFKGFPDEESIVNYTLNQAYQDNVTVFAS 636

  Fly   102 VEVFDTNSELYLQLMINRNAIGIAFPSEWYDIK---SCPEVLNLTIFMPLSIKRKDFK------- 156
            | :|.|..:            |...|...|.|:   |..|..|       .|:|..::       
Mouse   637 V-IFQTRKD------------GSLPPHVHYKIRQNSSFTEKTN-------EIRRAYWRPGPNTGG 681

  Fly   157 --YFESGFLLLQERISKIFI--FFKNAGNGKI-PRVLMNHFPYPSYVPNHYAESAKAMTYMTLIS 216
              ||..||:.:|:.:.:..|  |   .|:..: |...:..||||.|..:         .::.:|.
Mouse   682 RFYFLYGFVWIQDMMERAIINTF---VGHDVVEPGNYVQMFPYPCYTRD---------DFLFVIE 734

  Fly   217 FFLP-CITIA---------KYVVAEKERHQKAVLTAMGFSNSIHWLAWYTKSMLLLLLCLLIMIS 271
            ..:| |:.|:         :::|||||...|.|:..||.:|::||:||:....:.|.:.:..:.:
Mouse   735 HMMPLCMVISWVYSVAMTIQHIVAEKEHRLKEVMKTMGLNNAVHWVAWFITGFVQLSISVTALTA 799

  Fly   272 IFSIGLIYEFSSLVCLMTIFLVYIHSLVLFAFFISSFFSRSLSAVVATILMYFSTALPFL----- 331
            |...|.:...|.::.:.....||..:.::|.|.:|..:|::..|.....::||.:.:|::     
Mouse   800 ILKYGQVLMHSHVLIIWLFLAVYAVATIMFCFLVSVLYSKAKLASACGGIIYFLSYVPYMYVAIR 864

  Fly   332 -------IVGAENSSVAAQTAASIGLNSALFYILDSVAVMEMQSVGAQWYTIDNTASSG--YKLS 387
                   |...|....:..:..:.||.|..|      |:.|:..||.||:|...:...|  :.|.
Mouse   865 EEVAHDKITAFEKCIASLMSTTAFGLGSKYF------ALYEVAGVGIQWHTFSQSPVEGDDFNLL 923

  Fly   388 IVGYMLIMISI-----SWIELLICLYIEAVRTGEFEVPQPWSYPFQRRYWCPLRYGSSVFHQGAL 447
            :...||::.::     :|       |||||..|.:.:|:||.:|.|:.||    .||        
Mouse   924 LAVTMLMVDTVVYGVLTW-------YIEAVHPGMYGLPRPWYFPLQKSYW----LGS-------- 969

  Fly   448 LPLAGKNS--EGNLPAAH-----------------------------PTRQPIIYLDDRTQENFQ 481
                |:..  |.:.|.||                             ||..|::...|:..:.::
Mouse   970 ----GRTEAWEWSWPWAHTPRLSVMEEDQACAMESRHFEETRGMEEEPTHLPLVVCVDKLTKVYK 1030

  Fly   482 RVNISKKIGIEVRSLSKTFGFRNVVKDLFFNVYENEITALVGHKGSGKTTIIMMLCGILQPTTGT 546
            .   .||:.:...||               |:|||::.:.:||.|:||||.:.:|.|:..||:|:
Mouse  1031 N---DKKMALNKLSL---------------NLYENQVVSFLGHNGAGKTTTMSILTGLFPPTSGS 1077

  Fly   547 VLINGYDIVTEAKVAKSSLGICPQHSVIFKGMSARDHIYFFSRVKGYNKTEAMMESNIYISKLGL 611
            ..|.|:||.||....:.:||:||||:|:|..::..:|::|:||:|...:.|...|::..|..|.|
Mouse  1078 ATIYGHDIRTEMDEIRKNLGMCPQHNVLFDRLTVEEHLWFYSRLKSMAQEEIRKETDKMIEDLEL 1142

  Fly   612 VDSQKWDAMRLSPGNQRRLSLACALCAGSKVILCDEPSSGLDPIGRHELMRFLQKEKHGRTILMT 676
            .:.:......||.|.:|:||:|.|...||:.|:.|||::|:||..|..:...:.|.|.|||||::
Mouse  1143 SNKRHSLVQTLSGGMKRKLSVAIAFVGGSRAIILDEPTAGVDPYARRAIWDLILKYKPGRTILLS 1207

  Fly   677 TQQLEEGEILADRIAIMNDGQILCYGTLGYLKQLPFTSYTLS----------------------C 719
            |..::|.::|.|||||::.|::.|.|:..:||......|.|:                      |
Mouse  1208 THHMDEADLLGDRIAIISHGKLKCCGSPLFLKGAYGDGYRLTLVKQPAEPGTSQEPGLASSPSGC 1272

  Fly   720 QMAPNSKADNLTDLVRLYMTTTTSPVFHGVDVSYKLPRSQIDR--FPEFFQQLEENKKSLNVVSF 782
            ....:.....::..:|.::.::........::||.||...:.:  |...|||||.:..:|::.||
Mouse  1273 PRLSSCSEPQVSQFIRKHVASSLLVSDTSTELSYILPSEAVKKGAFERLFQQLEHSLDALHLSSF 1337

  Fly   783 GVSDSTLDGIYL-------SLDYGQGS-SRLRGGADPGVNDKVEFGVQTDKAIRTKDRANN--SL 837
            |:.|:||:.::|       ||:..:.. ...|....||.......|.|.....|..:.|.:  ||
Mouse  1338 GLMDTTLEEVFLKVSEEDQSLENSEADVKESRKDVLPGAEGLTAVGGQAGNLARCSELAQSQASL 1402

  Fly   838 VR-------------------------YQHQVDPPN--------ETILNTKTPINPIEIWRPIDR 869
            ..                         :.:..||.|        |.:.........:|.|     
Mouse  1403 QSASSVGSARGEEGTGYSDGYGDYRPLFDNLQDPDNVSLQEAEMEALAQVGQGSRKLEGW----- 1462

  Fly   870 EKGSCMAQWQAMFIKKKNYTASRALIFILILIIPLFYYIIVLGTAASEKCAHRTDKQPVLPLSLD 934
              ...|.|:..:.:|:.:.....:......:::|.|:..:.:..|.|  .....|..|::.....
Mouse  1463 --WLKMRQFHGLLVKRFHCARRNSKALCSQILLPAFFVCVAMTVALS--VPEIGDLPPLVLSPSQ 1523

  Fly   935 YYSY----DDMIILLEVDKQLYK------SEGEAYVQLVKEPATVESVDSIFSHLLKAP------ 983
            |::|    .:.|.....::|.|:      :..:..|...:.|:.|.:     :.:||:|      
Mouse  1524 YHNYTQPRGNFIPYANEERQEYRLRLSPDASPQQLVSTFRLPSGVGA-----TCVLKSPANGSLG 1583

  Fly   984 PIIRRDIKRKYVCGASFNNASTITAWFNSDAFEHSAPIALNLVYNALGKA-----VFEDQD---- 1039
            |::........:..|.|.::..:      ::|....|:: |.|......|     |..|:|    
Mouse  1584 PMLNLSSGESRLLAARFFDSMCL------ESFTQGLPLS-NFVPPPPSPAPSDSPVSPDEDSLQA 1641

  Fly  1040 --FSILVNRGDLHDFIWLNNASSMRRRYKRQ--------------------NDPD--------YT 1074
              .|:....|   ...| .:|.|:.|.....                    :.|.        .|
Mouse  1642 WNMSLPPTAG---PETW-TSAPSLPRLVHEPVRCTCSAQGTGFSCPSSVGGHPPQMRVVTGDILT 1702

  Fly  1075 DYSDYEIQEYDVVVKPN------SSSTSGQHNKSNPGDDNI----ITVQMSIIEAASTLYNEKGK 1129
            |.:.:.:.||.:.....      .:.|.|...||.|.....    :..::::...|..|||.||.
Mouse  1703 DITGHNVSEYLLFTSDRFRLHRYGAITFGNVQKSIPASFGARVPPMVRKIAVRRVAQVLYNNKGY 1767

  Fly  1130 RKQ-----------------------------------------------LFGTLIIITAYIALC 1147
            ...                                               |.||.::|..:|.:.
Mouse  1768 HSMPTYLNSLNNAILRANLPKSKGNPAAYGITVTNHPMNKTSASLSLDYLLQGTDVVIAIFIIVA 1832

  Fly  1148 LSI----FSIFVTKERVEHFKMQQEIYGVTLFYFWSTHFVGDFLIYAIYMGALTIAIYHF----- 1203
            :|.    |.:|:..|:....|..|.:.|.....:|..::|.|.|.|.:......|.::.|     
Mouse  1833 MSFVPASFVVFLVAEKSTKAKHLQFVSGCNPVIYWLANYVWDMLNYLVPATCCVIILFVFDLPAY 1897

  Fly  1204 ---TIWYQVVVMLLLIGFACLPFVYLCSLLFSLPNIAFAGIFAILVMTGGMLFSFMYMLTL---- 1261
               |.:..|:.:.||.|::..|.:|..|..|.:|:.|:..:..|.:..|.......::|.|    
Mouse  1898 TSPTNFPAVLSLFLLYGWSITPIMYPASFWFEVPSSAYVFLIVINLFIGITATVATFLLQLFEHD 1962

  Fly  1262 ----ITDVNFTTVFAILPMYVGTFGLFKCLAWREYCNREVLPPIEELDCKFGNCNVFCACKPERT 1322
                :.:....:.|.|.|.|....||.: :|:.||.|        |...|.|.   |...|....
Mouse  1963 KDLKVVNSYLKSCFLIFPNYNLGHGLME-MAYNEYIN--------EYYAKIGQ---FDKMKSPFE 2015

  Fly  1323 WMEVW----LLMVHCLVWFIFLWFSNFGY-----EIGYRFKPKLSNRIWHNNEKHIRVLDEERRV 1378
            |..|.    .:.|...|.|.......:.:     .:....||.         |..:.|..|.:||
Mouse  2016 WDIVTRGLVAMTVEGFVGFFLTIMCQYNFLRQPQRLPVSTKPV---------EDDVDVASERQRV 2071

  Fly  1379 GLIPKYEHEDYPIIVDQVTKNYCRAK----NAVQLVSFAIRPGDTFGLLGAQGAGKTSIFQMIAG 1439
               .:.:.::..:.::.:||.|...|    .||..:...:|||:.|||||..||||||.|:|:.|
Mouse  2072 ---LRGDADNDMVKIENLTKVYKSRKIGRILAVDRLCLGVRPGECFGLLGVNGAGKTSTFKMLTG 2133

  Fly  1440 ETSMSHGNIYVRGHSLREHRNAAKMEVGFCPQGDNAPKYLTGRQLLRIHCLLHGVP-KDHIKAVS 1503
            :.|.:.|..:|.|||:.:.....:..:|:|||.|.....||.|:.|:::..|.|:| ||..:.| 
Mouse  2134 DESTTGGEAFVNGHSVLKDLLQVQQSLGYCPQFDALFDELTAREHLQLYTRLRGIPWKDEAQVV- 2197

  Fly  1504 EQMAIE-FNFKDQLDRPIHTYSGGKKRKLNIALA-IDSGSVLCLDDTNGSVDHATQRFIWRKLEA 1566
             :.|:| .......|:|..|||||.||||:.|:| |...:.:.||:....:|...:||:|..:..
Mouse  2198 -KWALEKLELTKYADKPAGTYSGGNKRKLSTAIALIGYPAFIFLDEPTTGMDPKARRFLWNLILD 2261

  Fly  1567 VKRSGRPVLLTTQSMEEANAVCSRVAFLVAGEMMFIGSLQQVRSEVSNTIVIRLRVNPSDGKLKR 1631
            :.::||.|:||:.||||..|:|:|:|.:|.|.:..:||:|.:::...:..:|.:|...|      
Mouse  2262 LIKTGRSVVLTSHSMEECEALCTRLAIMVNGRLRCLGSIQHLKNRFGDGYMITVRTKSS------ 2320

  Fly  1632 RFQQLIADMAEL----FPLATLHEALETCLIYHININVTTLANLFYQMEKIRNEGLLEDYSITQV 1692
               |.:.|:...    ||.|.|.|...|.:.|.:.....:||.:|.:||::.....:||||::|.
Mouse  2321 ---QNVKDVVRFFNRNFPEAMLKERHHTKVQYQLKSEHISLAQVFSKMEQVVGVLGIEDYSVSQT 2382

  Fly  1693 SLDEIYRILNDEEDPNLVDLDSTHNS------------------EVLEDIRDTTRDTTRGTTRDT 1739
            :||.::.....::..|:...::..:|                  |:...:.|...|.   .|.|.
Mouse  2383 TLDNVFVNFAKKQSDNVEQQEAEPSSLPSPLGLLSLLRPRPAPTELRALVADEPEDL---DTEDE 2444

  Fly  1740 NLVSDEGIQKEKVKRKKVEEEDRDRQESTET 1770
            .|:|             .|||......:|:|
Mouse  2445 GLIS-------------FEEERAQLSFNTDT 2462

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31213NP_001262752.1 ABC2_membrane_3 32..>295 CDD:289468 66/296 (22%)
ABC_subfamily_A 491..708 CDD:213230 78/216 (36%)
drrA 498..796 CDD:130256 100/328 (30%)
ABC2_membrane_3 <1132..1285 CDD:289468 40/219 (18%)
CcmA 1391..1672 CDD:224054 98/291 (34%)
ABC_subfamily_A 1391..1609 CDD:213230 84/224 (38%)
Abca2XP_006497672.1 rim_protein 58..2398 CDD:130324 468/2029 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167838464
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53524
OrthoDB 1 1.010 - - D131191at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.860

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