DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG31213 and abca5

DIOPT Version :9

Sequence 1:NP_001262752.1 Gene:CG31213 / 42382 FlyBaseID:FBgn0051213 Length:1809 Species:Drosophila melanogaster
Sequence 2:NP_001135599.1 Gene:abca5 / 100216156 XenbaseID:XB-GENE-1012902 Length:1639 Species:Xenopus tropicalis


Alignment Length:1860 Identity:410/1860 - (22%)
Similarity:768/1860 - (41%) Gaps:402/1860 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 LWKDIK-LQLTNWV-------ELVMIIFLSALMPIFFSIGTKVAKSIFPPDIEMEKSP------- 64
            |||..| |...|::       :.:..|    |.||.:.:.:.:..|:.......|..|       
 Frog    10 LWKQTKTLLYKNYLIKCRTKRDSIQEI----LYPIIWWLISLLWASMVEQSKHYEAMPNTLLGGL 70

  Fly    65 -GPKSVNTSLFVDLYFTPNNGILEQLITQLAN--------ISEFKSVEVFDTNSELYLQLMINRN 120
             ||    :|..:.:.:||.:.|.:.::...|:        ...:...|...|.|..:     ..:
 Frog    71 DGP----SSRHLIIGYTPESNITQHIMAMTASECYLTDITFKPYLDEEHMKTASSSF-----EEH 126

  Fly   121 AIGIAFPSEW-----YDIKSCPEVLNLTIFMPLSIKRKD--------FKYFESGFLLLQERISKI 172
            .:|:.|.:..     :.:.|.|:   .|::|   ..|:|        .:||.|.|..||..|...
 Frog   127 FVGVVFDNAMSYKLRFSVYSVPD---STLYM---TPREDCHLWNCEASEYFYSTFTYLQACIDSS 185

  Fly   173 FIFFKNAGNGKIPRVLMNHFPYPSYVPNHYAESAKAMT------------YMTLISFFLPC---- 221
            .|..|.                 :|......:|.:|:.            |..|:|.||..    
 Frog   186 MIKMKT-----------------NYSAWEELKSTRAVIMGEQEVIVVDTFYHALMSVFLVMAFSP 233

  Fly   222 --ITIAKYVVAEKERHQKAVLTAMGFSNSIHWLAW---YTKSMLLLLLCLLIMISIFSIGLIYEF 281
              .::|.|||.|||:..|..:..||..::..||.|   ||..:|::.|.:.::.:.|     :.|
 Frog   234 LGYSVAFYVVFEKEKKVKEFMKLMGLHDTAFWLPWVLLYTGFILVISLVMAVVATTF-----FPF 293

  Fly   282 SSLVCLMTIFLVYI---HSLVLFAFFISSFFSRSLSAVVATILMYFST----ALPFLIVGAEN-- 337
            |...|.: |||:|.   .||||||..::..|..|..   |..:::.||    |:...||..|:  
 Frog   294 SKSNCFL-IFLLYALYGISLVLFALMLAPLFKNSKR---AGAIVFLSTLALGAVGIFIVLKEDFP 354

  Fly   338 ------SSVAAQTAASIGLNSALFYILDSVAVMEMQSVGAQWYTIDNTASSGYKLSIVGYMLIMI 396
                  .|...|....||:...|.        :|....|||:   .:.....|.|.|....|::.
 Frog   355 KSFVWFFSPFCQCTFMIGIAQVLH--------LEDFQRGAQF---THLKDGPYPLVITFIFLVVD 408

  Fly   397 SISWIELLICLYIEAVRTGEFEVPQPWSYPFQRRYWC--PLRYG---SSVFHQGALLPLAGKNSE 456
            |:.:  ||:..|::.|..||:.:.|...:..:..||.  ..|||   .|.|.:      |...||
 Frog   409 SVMY--LLLATYLDQVLPGEYGLRQSPFFFLKPSYWSKRKKRYGELNESYFDR------AVDMSE 465

  Fly   457 GNLPAAHPTRQPIIYLDDRTQENFQRVNISKKIGIEVRSLSKTFGF----RNVVKDLFFNVYENE 517
            ...|.:                    ..:..|..|.:..:.|:|..    ||.::.|.|::||.:
 Frog   466 VIEPVS--------------------AELHGKEAIRICCICKSFRKNNKPRNALQGLTFDIYEGQ 510

  Fly   518 ITALVGHKGSGKTTIIMMLCGILQPTTGTVLINGYDI--VTEAKVAKSSLGICPQHSVIFKGMSA 580
            |||||||.|:||||::.:|||:..||.|...:.|:.:  :.|.:.|....|||.|..:.|..::.
 Frog   511 ITALVGHSGTGKTTLMNILCGLCPPTEGFATVYGHRVTDIDEIQEASKMTGICQQTDIFFDVLTV 575

  Fly   581 RDHIYFFSRVKGYNKTEAMMESNIYISKLGLVDSQKWDAMRLSPGNQRRLSLACALCAGSKVILC 645
            .::::.|:.::|.::.....|.|..:..|.:...:...|..||.|.:|:||:|.|:....||:|.
 Frog   576 EENLHIFASLRGIDEKTKEQEINKILFDLDMQALKHNHARTLSIGQKRKLSVAIAVLGNPKVLLL 640

  Fly   646 DEPSSGLDPIGRHELMRFLQKEKHGRTILMTTQQLEEGEILADRIAIMNDGQILCYGTLGYLKQL 710
            |||::|:|...||.:...|:|.|.....:.:|..:||.:|||||.|:::.|.:.|.|:..:||..
 Frog   641 DEPTAGMDSCSRHTVWDLLKKRKGKHVTVFSTHCMEEADILADRKAVISQGSLKCIGSSLFLKSK 705

  Fly   711 PFTSYTLSCQMAPNSKADNLTDLVRLYMTTTTSPVFHGVDVSYKLPRSQIDRFPEFFQQLEENKK 775
            ....|.||..:......|.|:.|:..:::..:........:.|.||...:.:||..|..|:.. .
 Frog   706 WGVGYRLSMDIKKPCDVDALSSLITQHISGASLMQQSENSLLYSLPLKDVSKFPGLFSALDSG-S 769

  Fly   776 SLNVVSFGVSDSTLDGIYLSLDYGQGSSRLRGGADPGVNDKVEFGVQTDKAIRTKDRANNSLVRY 840
            .|.::::|||.:||:.::..|:                 .:.|.. |||.....::..:....:.
 Frog   770 DLGIITYGVSATTLEDVFFKLE-----------------TEAEID-QTDGIFNQRNLEDEGKWKS 816

  Fly   841 QHQVDPPNETILNTKTPINPIEIWRPIDREKGSCMAQWQAMFIKKKNY-----------TASRAL 894
            ...::   :.:|......:|..:       .||.:.:.|...:.|.::           .....|
 Frog   817 MEDIE---QGLLELSLESSPCSV-------TGSALWKQQVAAVAKLHFRNLHRESKSFRCVCLCL 871

  Fly   895 IFILILIIPLFYYIIVLGTAASEKCAHRTDKQPVLPLSLD-YYSYDDMIILLEVDKQLYKSEGEA 958
            :|.|:..:.|::    ||.:..:..|      |: .||.| |:|:.             |.:...
 Frog   872 LFFLVPQLTLYF----LGLSYHQSLA------PI-RLSADMYFSHP-------------KQKSHK 912

  Fly   959 YV-QLVKEPATVESVDSIFSHLLKAPPIIRRDIKRKYVCGASFNNAS---------------TIT 1007
            :: .|:.:.:|..::|.:..:|..      :.||...:.|:.:.:||               |..
 Frog   913 FLTSLLLQNSTGTNLDELLGNLNS------QKIKVDLINGSDYMSASPHNAALNVFLSGKHYTYE 971

  Fly  1008 AWFNSDAFEHSAPIALNLVYNALGKAVFEDQDFSILVNRGDLHDFIWLNNASSMRRRYKRQNDPD 1072
            |.||| :..||.|:.:|.:.|:|.:.:..::...           :|              |.|.
 Frog   972 AIFNS-SMVHSLPVLINTISNSLLRQLGVNESIE-----------VW--------------NSPF 1010

  Fly  1073 YTDY--SDYEIQEYDVVVKPNSSSTSGQHNKSNPGDDNIITVQMSIIEAASTLYNEKGKRKQLFG 1135
            |.|:  :.|.:..|.::...                 .|:|..:..| |....||.|        
 Frog  1011 YQDFLHTSYGLDFYFLIAYL-----------------GIMTGMLPYI-AMENAYNHK-------- 1049

  Fly  1136 TLIIITAYIALCLSIFSIFVTKERVEHFKMQQEIYGVTLFYFWSTHFVGDFLIY--AIYMGALTI 1198
                :.||..|.::  .::.:.     :.:.|.:..:.||:......||..|.:  .|.:.|.|:
 Frog  1050 ----VKAYSQLKMA--GLYPSA-----YWVGQAVVDIPLFFLMLLFMVGSMLAFKSGIDLHAGTV 1103

  Fly  1199 AIYHFTIWYQVVVMLLLIGF--ACLPFVYLCSLLFSLPN---------IAFAGIFAILVMTGGML 1252
                      :.::..|||:  |.:...|:.|..:.|.|         .|.....:|:::...:.
 Frog  1104 ----------LAMIFCLIGYVPAVVLLTYVVSFTYKLINDTRQWWSLIFAVTASISIIIIEAAIF 1158

  Fly  1253 FSFMYMLTLITDVNFTTVFAILPMYVGTFGLFKCLAWREYCNREVLPPIEELDCKFGNCNVFCAC 1317
            |:....:|.: .|.|:..|.:.|:    .|...|..              ::.....:.:|....
 Frog  1159 FASSVTVTRL-HVFFSIFFPVYPL----LGCLTCFI--------------KMSRNLAHSDVKGLT 1204

  Fly  1318 KPERTWMEVWLLMVHCLVWFIFLWFSNFGY-------EIGYRFKPKLSNRIW------HNNEKHI 1369
            :..|..:.|:...||.|::|:.|.:....|       :..:|.:.| ..:.|      .:.::.:
 Frog  1205 QLGRLLVAVFAPYVHFLIFFLILRYLEMKYGGRSIRKDPVFRSQTK-KTKPWKFAEVPEDEDEDV 1268

  Fly  1370 RVLDEERRVGLIPKYEHEDYPIIV--------DQVTKNY---CRAKNAVQLVSFAIRPGDTFGLL 1423
            :|  |..|||.....:..:.|:::        ||..|..   ...|..|..|||.:|.|:|.||:
 Frog  1269 KV--ERARVGEYMAPDCNEKPMVLVSGLHKEQDQTGKTILGKAMRKLVVNNVSFCVRKGETVGLV 1331

  Fly  1424 GAQGAGKTSIFQMIAGETSMSHGNIYVRGHSLREHRNAAKMEVGFCPQGDNAPKYLTGRQLLRIH 1488
            |..||||:::..|:.|::.::.|.|.:...:..|...:....:|:.||.:.....:..::.|..:
 Frog  1332 GPNGAGKSTLLNMMVGQSELNAGQILMGDPAAGEPGLSPPRFLGYSPQTNYFWPEIKLQEHLETY 1396

  Fly  1489 CLLHGVPKDHIKAVSEQMAIEFNFKDQLDRPIHTYSGGKKRKLNIALA-IDSGSVLCLDDTNGSV 1552
            ..:.|:..:.:|.|:.::....:.||.|..|....|.|.:|||:.||: :.:..::.|::.:..:
 Frog  1397 GAIKGMGSNVLKEVTRRIVETLDLKDHLQEPAKKLSVGNQRKLSFALSMLGNPDIVLLEEPSTGM 1461

  Fly  1553 DHATQRFIWRKLE-AVKRSGRPVLLTTQSMEEANAVCSRVAFLVAGEMMFIGSLQQVRSEVSNTI 1616
            |...::.:|:.:. .:|...:..::||.|||||.|:|.|||.:|:|::.:|||:|.::|:.....
 Frog  1462 DPKNKQIMWKVIRTTLKGKEQAAVITTHSMEEAEAICDRVAIMVSGQLRYIGSVQHLKSKFGRYF 1526

  Fly  1617 VIRLRVNPSDGKLKRRFQQ---LIADMAELFPLATLHEALETCLIYHI-NINVTTLANLFYQMEK 1677
            .:.|:::     .:.|.|.   |..::.::||.|:..|:..:.:.|.: ..:|.:|:..|.::|:
 Frog  1527 SLELKLD-----TRARSQNVEFLHKEILQIFPNASHQESFSSLMSYKVPKEDVESLSQTFSKLEQ 1586

  Fly  1678 IRNEGLLEDYSITQVSLDEIYRIL--NDEEDPNLVDLDST 1715
            ::....:|:|..:|.:|::::..|  ..||:.|:..::||
 Frog  1587 VKQMYNIEEYIFSQATLEQVFIELAKEQEEEDNIATMNST 1626

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31213NP_001262752.1 ABC2_membrane_3 32..>295 CDD:289468 66/312 (21%)
ABC_subfamily_A 491..708 CDD:213230 74/222 (33%)
drrA 498..796 CDD:130256 94/303 (31%)
ABC2_membrane_3 <1132..1285 CDD:289468 29/165 (18%)
CcmA 1391..1672 CDD:224054 75/297 (25%)
ABC_subfamily_A 1391..1609 CDD:213230 63/230 (27%)
abca5NP_001135599.1 rim_protein <87..1616 CDD:130324 387/1763 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D131191at2759
OrthoFinder 1 1.000 - - FOG0000051
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

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