Sequence 1: | NP_001262752.1 | Gene: | CG31213 / 42382 | FlyBaseID: | FBgn0051213 | Length: | 1809 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_005173137.1 | Gene: | abca1b / 100136868 | ZFINID: | ZDB-GENE-030131-9826 | Length: | 2282 | Species: | Danio rerio |
Alignment Length: | 1970 | Identity: | 484/1970 - (24%) |
---|---|---|---|
Similarity: | 826/1970 - (41%) | Gaps: | 420/1970 - (21%) |
- Green bases have known domain annotations that are detailed below.
Fly 15 LWKDIKLQLTNWVE------LVMIIFLSALMPIFFS---IGTKVAK----SIFPPDIEMEKSPGP 66
Fly 67 KSVNTSLFVDLYFTPNNGILEQLITQLANISEFKSVEVFDTNSELY---LQLMINRNA-IGIAFP 127
Fly 128 SEWYDIKS----CPEVLNLTIFMPL-SIKR------------------KDFKYFESGFLLLQERI 169
Fly 170 SKIFIFFKNAGNGKIPR--VLMNHFPYPSYVPNHYAE--SAKAMTYMTLISFFLPCITIAKYVVA 230
Fly 231 EKERHQKAVLTAMGFSNSIHWLAWYTKSMLLLLLCLLIMISIFSIGLIYEFSSLVCLMTIFLVYI 295
Fly 296 HSLVLFAFFISSFFSRSLSAVVATILMYFSTALPFLIVGAENSSV--AAQTAASIGLNSALFYIL 358
Fly 359 DSVAVMEMQSVGAQWYTIDNTASSGYKLSIVGYMLIMISISWIELLICLYIEAVRTGEFEVPQPW 423
Fly 424 SYPFQRRYWCPLRYGSSVFHQGALLPLAGKNSEGNLPAAHPTRQPIIYLDDRTQENFQRVNISK- 487
Fly 488 ----KIGIEVRSLSKTF--GFRNVVKDLFFNVYENEITALVGHKGSGKTTIIMMLCGILQPTTGT 546
Fly 547 VLINGYDIVTEAKVAKSSLGICPQHSVIFKGMSARDHIYFFSRVKGYNKTEAMMESNIYISKLGL 611
Fly 612 VDSQKWDAMRLSPGNQRRLSLACALCAGSKVILCDEPSSGLDPIGRHELMRFLQKEKHGRTILMT 676
Fly 677 TQQLEEGEILADRIAIMNDGQILCYGTLGYLKQLPFTSYTL------------SCQMAPNS---- 725
Fly 726 -KADNLTD---------------LVRLYMTTTTSPVF-----------------------HGVDV 751
Fly 752 SYKLP--RSQIDRFPEFFQQLEENKKSLNVVSFGVSDSTLDGIYLSL--DYGQGSSRLRGGADPG 812
Fly 813 VNDKVE-FGVQTDKAIR--TKDRANNSLVRYQHQVDPPN-ET-ILNTKTPINPIEI--WRPIDRE 870
Fly 871 KGSCMAQWQAMFI---KKKNYTASRAL--IFILI-----LIIPLFYYIIVLGTAASEKCAHRTDK 925
Fly 926 QPVLPLSLDYYSYDDMIILLEVDKQLYKSEGEAYVQLVKEP------------------------ 966
Fly 967 ATVESVDSIFSHLLK---------------------------------APPIIR----------- 987
Fly 988 -RDIK----RKY--VCGASFNNASTITAWFN-----------------------SDAFEHSAPIA 1022
Fly 1023 LNLVYNALGKAVFEDQD-----FSILVNRGDLHD--FIWLNN---------ASSMRRRYKRQNDP 1071
Fly 1072 DYTDYSDYEIQEYDVVVKPNSSSTSGQHNKSNPGDDNIITVQMSIIEAASTLYNEKGKRKQLFGT 1136
Fly 1137 LIIITAYIALCLSI----FSIFVTKERVEHFKMQQEIYGVTLFYFWSTHFVGDFLIYAIYMGALT 1197
Fly 1198 IAIYHFTIWYQ-----------VVVMLLLIGFACLPFVYLCSLLFSLPNIAFAGIFAILVMTG-- 1249
Fly 1250 GMLFSFM------YMLTLITDVNFTTVFAILPMYVGTFGLFKCLAWREYCNREVLPPIEELDCKF 1308
Fly 1309 GNCNVFCACKPERTWMEVWLLMVHCLVWFIFLWFSNFGYEIGYR--FKPK-LSNRIWHNNEKHIR 1370
Fly 1371 VLDEERRV------GLIPKYEHEDYPIIVDQVTKNYCR-AKNAVQLVSFAIRPGDTFGLLGAQGA 1428
Fly 1429 GKTSIFQMIAGETSMSHGNIYVRGHSLREHRNAAKMEVGFCPQGDNAPKYLTGRQLLRIHCLLHG 1493
Fly 1494 VPKDHIKAVSEQMAIEFNFKDQLDRPIHTYSGGKKRKLNIALA-IDSGSVLCLDDTNGSVDHATQ 1557
Fly 1558 RFIWRKLEAVKRSGRPVLLTTQSMEEANAVCSRVAFLVAGEMMFIGSLQQVRSEVSNTIVIRLRV 1622
Fly 1623 NPSDGKLKRRFQQLIADMAELFPLATLHEALETCLIYHININVTTLANLFYQMEKIRNEGLLEDY 1687
Fly 1688 SITQVSLDEIY-RILNDEED 1706 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
CG31213 | NP_001262752.1 | ABC2_membrane_3 | 32..>295 | CDD:289468 | 69/300 (23%) |
ABC_subfamily_A | 491..708 | CDD:213230 | 86/218 (39%) | ||
drrA | 498..796 | CDD:130256 | 116/356 (33%) | ||
ABC2_membrane_3 | <1132..1285 | CDD:289468 | 40/175 (23%) | ||
CcmA | 1391..1672 | CDD:224054 | 96/282 (34%) | ||
ABC_subfamily_A | 1391..1609 | CDD:213230 | 80/219 (37%) | ||
abca1b | XP_005173137.1 | rim_protein | 1..2242 | CDD:130324 | 482/1964 (25%) |
ABC_subfamily_A | 902..1121 | CDD:213230 | 86/218 (39%) | ||
ABC_subfamily_A | 1932..2152 | CDD:213230 | 80/219 (37%) | ||
DUF4162 | 2146..2238 | CDD:290451 | 28/95 (29%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 1 | 1.010 | - | - | QHG53524 | |
OrthoDB | 1 | 1.010 | - | - | D131191at2759 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0000051 | |
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
4 | 3.930 |