DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG31213 and abca2

DIOPT Version :9

Sequence 1:NP_001262752.1 Gene:CG31213 / 42382 FlyBaseID:FBgn0051213 Length:1809 Species:Drosophila melanogaster
Sequence 2:XP_005165286.1 Gene:abca2 / 100006090 ZFINID:ZDB-GENE-050517-1 Length:2504 Species:Danio rerio


Alignment Length:2006 Identity:481/2006 - (23%)
Similarity:838/2006 - (41%) Gaps:425/2006 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    75 VDLY--FTPNNGILEQLITQL--ANISEFKSVEVFDTNSELYLQLMINRNAIGIAFPSEWYDIK- 134
            ||::  |.....|:...:.|.  .|:|.|.|| :|.||.:            |...|...|.|: 
Zfish   630 VDIFRGFPDEESIVNYTLNQAYHDNVSVFASV-IFQTNKD------------GSLPPHVMYKIRQ 681

  Fly   135 --SCPEVLNLTIFMPLSIKRKDFK---------YFESGFLLLQERISKIFI--FFKNAGNGKI-P 185
              |..|..|       .|:|..::         ||..||:.:|:.|.:..|  |   .|:..: |
Zfish   682 NSSFTEKTN-------EIRRAYWRPGPNTGGKFYFLYGFVWIQDMIERAIINTF---VGHDVVEP 736

  Fly   186 RVLMNHFPYPSYVPNHYAESAKAMTYMTLISFFLP-CITIA---------KYVVAEKERHQKAVL 240
            ...:..||||.|..:         .::.:|...:| |:.|:         :::|||||:..|.|:
Zfish   737 GNYVQMFPYPCYTRD---------DFLFVIEHMMPLCMVISWVYSVAMMIQHIVAEKEQRLKEVM 792

  Fly   241 TAMGFSNSIHWLAWYTKSMLLLLLCLLIMISIFSIGLIYEFSSLVCLMTIFLVYIHSLVLFAFFI 305
            ..||.:|::||:||:....:.|.:.:..:.:|...|.:...|....:.....:|..:.::|.|.:
Zfish   793 KMMGLNNAVHWVAWFITGFVQLSISVTALTAILKYGKVLLHSDPFIIWLFLTIYAVATIMFCFLV 857

  Fly   306 SSFFSRSLSAVVATILMYFSTALPFL------------IVGAENSSVAAQTAASIGLNSALFYIL 358
            |..:|::..|.....::||.:.:|::            |...|....:..:..:.||.|..|   
Zfish   858 SVLYSKAKLASACGGIIYFLSYVPYMYVAIREEVAHDKITAFEKCIASLMSTTAFGLGSKYF--- 919

  Fly   359 DSVAVMEMQSVGAQWYTIDNTASSGYKLSIVGYMLIMISISWIEL-LICLYIEAVRTGEFEVPQP 422
               |:.|:..||.||.||:.:...|...::: ..::|::|..|.. ::..|||||..|.:.:|:|
Zfish   920 ---ALYEVAGVGIQWRTINQSPVEGDDFNLL-LSMVMLTIDAIVYGVLTWYIEAVHPGMYGLPRP 980

  Fly   423 WSYPFQRRYWCPLRYGSSVFHQGALLPLAGKNSEGNLPAAHPTRQPIIYLDDRTQENFQRVNISK 487
            |.:|.|:.||    .||            |:......|....||..::..|.......:|...::
Zfish   981 WYFPLQKSYW----LGS------------GRIETWEWPWGGGTRLSVMEEDQACAMEHRRSEETR 1029

  Fly   488 KIGIE-----------VRSLSKTF--GFRNVVKDLFFNVYENEITALVGHKGSGKTTIIMMLCGI 539
              |||           :..|:|.:  |.:..:..|..|::||::.:.:||.|:||||.:.:|.|:
Zfish  1030 --GIEEEPNHLPLVVCIDKLTKVYKTGSKLALNKLSLNLHENQVVSFLGHNGAGKTTTMSILTGL 1092

  Fly   540 LQPTTGTVLINGYDIVTEAKVAKSSLGICPQHSVIFKGMSARDHIYFFSRVKGYNKTEAMMESNI 604
            ..||:|:..|.|:||.||.:..:.:||:||||:|:|..:|..:|::|:||:||..:.:...|.:.
Zfish  1093 FPPTSGSATIYGHDIRTEMERIRQNLGMCPQHNVLFDKLSVEEHLWFYSRLKGMAEEDIRKEMDK 1157

  Fly   605 YISKLGLVDSQKWDAMRLSPGNQRRLSLACALCAGSKVILCDEPSSGLDPIGRHELMRFLQKEKH 669
            .|..|.|.:.:......||.|.:|:||:|.|...||:.::.|||::|:||..|..:...:.|.|.
Zfish  1158 MIEDLELSNKRHSLVQTLSGGMKRKLSVAIAFVGGSRAVILDEPTAGVDPYARRAIWDLILKYKQ 1222

  Fly   670 GRTILMTTQQLEEGEILADRIAIMNDGQILCYGTLGYLKQLPFTSYTL----------------- 717
            |||||::|..::|.::|.|||||::.|::.|.|:..:||......|.|                 
Zfish  1223 GRTILLSTHHMDEADLLGDRIAIISHGKLKCCGSPLFLKSTYGDGYKLTLVKKQSDSHTADQSSQ 1287

  Fly   718 --SCQMAPNSKADNLTDLVRLYMTTTTSPVFHGVDVSYKLPRSQIDR--FPEFFQQLEENKKSLN 778
              |..::|.|: :.:|..:|.|:.:.........::||.||...:.:  |...||.||::..||.
Zfish  1288 SPSSSISPCSE-NRVTQFIRQYVASCLLVSDSNTELSYVLPSEAVKKGCFERLFQALEQSLDSLA 1351

  Fly   779 VVSFGVSDSTLDGIY-------LSLDYGQGSSR-LRGGADPGVNDKVEFGVQTDKA-----IRTK 830
            :.||||.|:||:.::       |||:......: ..|||..|....:..|.|.:.|     :|.:
Zfish  1352 LTSFGVMDTTLEEVFLKVSEEDLSLENSDADMKDSPGGASAGKPSGLLGGPQCEGAPAAAVMRPE 1416

  Fly   831 DRANNSLVRYQHQVDPPNETILNTKTPINPIE------------IWRPI-------------DRE 870
            ...:|.::..:..   |::..|.:.:.:..:.            .:.|:             |.|
Zfish  1417 VELSNLMMCSRLS---PSQASLQSGSSLGSVRGDEGGPYSEFYGDYCPLFDNGQDLDSASLRDEE 1478

  Fly   871 ----------KGSC--------MAQWQAMFIKK----KNYTASRALIFILILIIPLFYYIIVLGT 913
                      :||.        :.|:..:.:|:    |..|..   ||..|| :|.|:..:.:..
Zfish  1479 SSPQPTVLEGQGSFKLDGWWLKLRQFHGLIVKRFHCAKRNTKG---IFSQIL-LPAFFVCVAMTV 1539

  Fly   914 AASEKCAHRTDKQPVLPLSLDYYSY----DDMIILLEVDKQLYKSE------GEAYVQLVKEPAT 968
            |.|  .....|..|::.....|::|    .:.|.....|:..|:::      .:..|..::.|:.
Zfish  1540 ALS--VPEIGDLPPLILSPSQYHNYTQPRGNFIPYANEDRSQYRTKFSPDAGPQRIVNTLRLPSG 1602

  Fly   969 VESVDSIFSHLLKAPPIIRRDIKRKYVCGASFNNASTITA-WFNS---DAFEHSAPIALNLVYNA 1029
            |.:     :.:||.|.....| :.........||:.|:.| :|:|   |:|....|:: |.|...
Zfish  1603 VGA-----TCILKTPFNSTLD-QLAQTLNPYANNSKTLAARYFDSMCLDSFTQGVPLS-NFVPPP 1660

  Fly  1030 LGKAVFEDQDFSILVNRGDLHDFIWLNNASSMRRRYKRQNDPD---------------------- 1072
            ...|..:|.:       ....|.:|...|:....|....:.|.                      
Zfish  1661 PSPAPSDDPE-------AHFEDGLWNYTAAPTTVREMATSPPTLPLSIHEPVRCICSMQGTGFSC 1718

  Fly  1073 ------------------YTDYSDYEIQEYDVVVKPN------SSSTSGQHNKSNPGDDNIITVQ 1113
                              ..|.:...:.||.:.....      ...|.|...||.|......|..
Zfish  1719 PSGVGGRPPLMKVVTGDILVDITGRNVSEYLLYTSDRLRLHRYGGFTVGNIQKSVPASFGRKTPP 1783

  Fly  1114 M----SIIEAASTLYNEKGKRKQ------------------------------------------ 1132
            |    ::..::..|||.||....                                          
Zfish  1784 MVRKIAVRRSSQVLYNNKGYHSMPTYLNVLNNAILRANLPSSKGNPSAYGITVTNHPMNRTSASL 1848

  Fly  1133 -----LFGTLIIITAYIALCLSI----FSIFVTKERVEHFKMQQEIYGVTLFYFWSTHFVGDFLI 1188
                 |.||.::|..:|.:.:|.    |.:|:..|:....|..|.:.|.....:|..:::.|.|.
Zfish  1849 SLDYLLQGTDVVIAIFIIVAMSFVPASFVVFLVAEKSTKAKHLQFVSGCDPVTYWLANYIWDMLN 1913

  Fly  1189 YAIYMGALTIAIYHF--------TIWYQVVVMLLLIGFACLPFVYLCSLLFSLPNIAFAGIFAIL 1245
            |.:......:.::.|        |.:..|:.:.||.|::..|.:|..|..|.:|:.|:..:..|.
Zfish  1914 YLVPATCCVLILFVFDLPAYTSPTNFPAVLSLFLLYGWSITPIMYPASFWFEVPSTAYVFLIVIN 1978

  Fly  1246 VMTGGMLFSFMYMLTL--------ITDVNFTTVFAILPMYVGTFGLFKCLAWREYCNR------- 1295
            :..|.......::|.|        :.:....:.|.|.|.|....||.: :|:.||.|.       
Zfish  1979 LFIGITATVATFLLQLFERDKDLKLVNSYLKSCFLIFPNYNLGHGLME-MAYNEYINEYYAKIGQ 2042

  Fly  1296 --EVLPPIEELDCKFGNCNVFCACKPERTWMEVWLLMVHCLVWFIFLWFSNFGYEI--GYRFKPK 1356
              :|..|.|                        |.::...||......|..|...|  .|.|..|
Zfish  2043 FDKVKSPFE------------------------WDIVTRGLVAMTIEGFVGFLITILCQYNFLRK 2083

  Fly  1357 LSNRIWHNN----EKHIRVLDEERRVGLIPKYEHEDYPIIVDQVTKNYCRAKN----AVQLVSFA 1413
             :.|:..|:    :..:.|..|.|||   .:.:.::..:.:|.:||.|...|.    ||..:...
Zfish  2084 -AQRVPVNSQPVEDDDVDVACERRRV---LRGDADNDMLKIDNLTKVYKSRKMGRILAVDRLCLG 2144

  Fly  1414 IRPGDTFGLLGAQGAGKTSIFQMIAGETSMSHGNIYVRGHSLREHRNAAKMEVGFCPQGDNAPKY 1478
            :|||:.|||||..|||||:.|:|:.|:.|.:.|..:::.||:.......:..:|:|||.|.....
Zfish  2145 VRPGECFGLLGVNGAGKTTTFKMLTGDESTTGGEAFIQEHSILRELLRVQQSIGYCPQFDALFDD 2209

  Fly  1479 LTGRQLLRIHCLLHGVP-KDHIKAVSEQMAIE-FNFKDQLDRPIHTYSGGKKRKLNIALA-IDSG 1540
            ||.|:.|.::..|.|:| ||..:.|  |.|:| .......|:|..|||||.||||:.|:| |...
Zfish  2210 LTAREHLELYTRLRGIPWKDEERVV--QWALEKLELSKYADKPAGTYSGGNKRKLSTAIALIGYP 2272

  Fly  1541 SVLCLDDTNGSVDHATQRFIWRKLEAVKRSGRPVLLTTQSMEEANAVCSRVAFLVAGEMMFIGSL 1605
            |::.||:....:|...:||:|..:..:.::||.|:||:.||||..|:|:|:..:|.|....:||:
Zfish  2273 SLIFLDEPTTGMDPKARRFLWNLILDIIKTGRSVVLTSHSMEECEALCTRLGIMVNGRFKCLGSI 2337

  Fly  1606 QQVRSEVSNTIVIRLRVNPSDGKLKRRFQQLIADMAELFPLATLHEALETCLIYHININVTTLAN 1670
            |.:::...:..:|.:|.     |.....:::|......||.|.|.|...|.:.|.:.....:||.
Zfish  2338 QHLKNRFGDGYMITVRT-----KTTASVKEVIRFFNRNFPEAILKERHHTKIQYQLKSENISLAQ 2397

  Fly  1671 LFYQMEKIRNEGLLEDYSITQVSLDEIYRILNDEEDPNLVDLDSTHNS---EVLEDIRDTTRDTT 1732
            :|.:||::.....:||||::|.:||.::.....::..||...:|:.:|   ..|:.:....|...
Zfish  2398 VFSKMEQVVEVLSIEDYSVSQTTLDNVFVNFAKKQSDNLEQQESSPSSGGQSPLQHLLSLLRPRP 2462

  Fly  1733 RGTTRDTNLVSDEGIQKEKVKRKKVEEEDRDRQESTETSKPKVKRSPATQSDSTDT 1788
            ..|..:. |||:|        .:::|.:|.:...|.|..:.::       |.:|||
Zfish  2463 ANTELNA-LVSEE--------PEELESDDDEGLISFEEERVQL-------SFNTDT 2502

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31213NP_001262752.1 ABC2_membrane_3 32..>295 CDD:289468 59/248 (24%)
ABC_subfamily_A 491..708 CDD:213230 81/229 (35%)
drrA 498..796 CDD:130256 107/327 (33%)
ABC2_membrane_3 <1132..1285 CDD:289468 38/219 (17%)
CcmA 1391..1672 CDD:224054 96/287 (33%)
ABC_subfamily_A 1391..1609 CDD:213230 83/224 (37%)
abca2XP_005165286.1 rim_protein 1..2435 CDD:130324 462/1921 (24%)
ABC_subfamily_A 1042..1261 CDD:213230 79/218 (36%)
ABC_subfamily_A 2118..2341 CDD:213230 83/224 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170582254
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D131191at2759
OrthoFinder 1 1.000 - - FOG0000051
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.940

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