DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4459 and OCT1

DIOPT Version :9

Sequence 1:NP_650850.1 Gene:CG4459 / 42377 FlyBaseID:FBgn0038753 Length:632 Species:Drosophila melanogaster
Sequence 2:NP_565059.2 Gene:OCT1 / 843656 AraportID:AT1G73220 Length:539 Species:Arabidopsis thaliana


Alignment Length:561 Identity:113/561 - (20%)
Similarity:214/561 - (38%) Gaps:137/561 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 DVVEQVNGSFGRWQLRTILLIFLCKIPSAWFTAIIIYTAPYPWKGELVCHPADWNVSRSQTEHVD 83
            :|:||..|:.|..|:...||:.:..|..|..|.|.|::                           
plant    47 EVIEQHIGALGFAQILHALLVSIAWIFDAQTTLISIFS--------------------------- 84

  Fly    84 RNHPLWQDARSTDRLF-------NVDVCNAYSNSLARGFVRSHGQEWNASQSKEPGGQSSLPCEH 141
                   ||:...||.       ...:|     .||.|       ||                |.
plant    85 -------DAQPAARLLATGAIVEGASLC-----GLASG-------EW----------------EW 114

  Fly   142 VEHRTDYKSLISQFDLICSRRVLVALTQSFHALGALIG-GLMAYSALKKISPRRLMLLGMIGQIF 205
            :..::|  :::|:::|||..:.|||:..:...:|:|.| |:..|.|......::.:||..:... 
plant   115 IGPKSD--TVVSEWNLICQHKFLVAVPSTLFFIGSLFGSGVYGYLADSWFGRKKTLLLSCVLTF- 176

  Fly   206 CGNLTGLVDTYQLHIYFRCLTSIFCALMYTSGQFILNDITSGKARIIVVTLSEL----------- 259
               :|....::..:::      ::..|.:.:|.|     .||.....:|..:|:           
plant   177 ---VTAFAISFSPNVW------VYAFLRFANGFF-----RSGIGSCCIVLATEIVGKKWRGQVGQ 227

  Fly   260 ----FWSMGLVLLPAISIYFD--NWSYLYVAIS-SSLIVLVWLHRWIADAPRWLLQHQRVEAALR 317
                |:::|.:.||.:: |.:  :|..||..|| ..|...|.|..:..::|||||...|.:.|:.
plant   228 YGFFFFTLGFLSLPLMA-YLERKSWRNLYRIISFLPLGYAVCLLPFAYESPRWLLVKGRNKEAMV 291

  Fly   318 QLLESATYNNRKVPLTLDVQLTMYANDLDQKSKQKHSYCQVWDGETKRSQLVYIHLIWGGAMVLY 382
            .|.:.|..|.:::|..|.:     .:.:.::..|..|..:.|..:....:::.:.:...|:..:|
plant   292 VLKKLARLNGKQLPADLSL-----VDPIPERDDQTSSSEKFWKTKWAVKRIIMVMMAGFGSGFVY 351

  Fly   383 NIILLMIRNLGAQQVHVNTAAMGFAEMVGLFVGLYLILYTRRHWRWAGNLMIIAGLSTYLIWLLP 447
            ..|.|...||.. .:::..|.....|...:|:|.:|:....|...:: |...:||.:..|..:| 
plant   352 YGIQLNAENLNF-NLYLTVAVNALMEFPAVFIGSFLLGVMNRRPLFS-NSSYLAGFACLLCAVL- 413

  Fly   448 ETERNSRRV--GLELVFWLILKI------ANSASIAVLTTCTSEIVSKEKRVVLMLSVISFSRVC 504
                :..||  .:.:..||.|.:      |:|.:..||.....|:.....|    .:.:|..|..
plant   414 ----SIHRVIRAISVAKWLQLAVEAVGFMASSTAYDVLYVYCVELFPTNVR----NTAVSLLRQA 470

  Fly   505 LLF----CPFLSCL---TVIHHLVPITILATMGWIYGLALR 538
            .:.    .|.|..|   :.:...:...:.:.:..|..|.||
plant   471 FMLGASAAPLLVALGRESAMMSFIVFGVASVLSGIVSLWLR 511

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4459NP_650850.1 2A0119 26..536 CDD:273328 107/550 (19%)
MFS 164..540 CDD:119392 84/409 (21%)
OCT1NP_565059.2 MFS_OCT_plant 102..511 CDD:340936 94/470 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24064
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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