DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4459 and oct2

DIOPT Version :9

Sequence 1:NP_650850.1 Gene:CG4459 / 42377 FlyBaseID:FBgn0038753 Length:632 Species:Drosophila melanogaster
Sequence 2:NP_001107932.1 Gene:oct2 / 797890 ZFINID:ZDB-GENE-080204-92 Length:554 Species:Danio rerio


Alignment Length:593 Identity:122/593 - (20%)
Similarity:217/593 - (36%) Gaps:132/593 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 DVVEQVNGSFGRWQLRTILLIFLCKIPSAWFTAIII------YTAPYPWKGELVCHPADWNVSRS 77
            |.:.|..|.||.:|.|   :..|..:|......::|      ||            |..|..:.|
Zfish     5 DELLQHAGDFGFYQKR---ISVLGSLPILLLAFVLIGVVFLGYT------------PDHWCKTAS 54

  Fly    78 QTEHVDRNHPLWQD-------ARSTDRLFNVDVCNAYSNSLARGFVRSHGQEWNASQSKEPGGQS 135
            ..|....:....:|       ||..     ...|..:.::|..|                    |
Zfish    55 LQEKCGFSEEQVRDLTVPRTGARGA-----FSKCVKFDDALRNG--------------------S 94

  Fly   136 SLPCE--------HV----------EHRTDYKSLISQFDLICSRRVLVALTQSFHALGALIGGLM 182
            :|.|.        |:          |:||   :::::|.|:|....|..|.|...|.|..||.|:
Zfish    95 ALSCNISIFNNSTHLSACNEGWTFNENRT---TIVTEFSLVCEDSWLADLNQVSLAGGFFIGALV 156

  Fly   183 AYSALKKISPRRLMLLGMIGQIFCGNLTGLVDTYQLHIYFRCLTSIFCALMYTSGQFILNDITSG 247
            ......:...:...:..:.|....|........|.|.::||||...|....:|:...::.:....
Zfish   157 TGYLADRFGRKSCFIASIFGLGVSGTCIIFSPYYPLLLFFRCLQGFFAKGAWTATYVLIIEFFGS 221

  Fly   248 KARIIVVTLSELFWSMGLVLLPAISIYFDNWSYLYVAISSSLIVLVWLHRWIADAPRWLLQHQRV 312
            ..|..|..:|..|:|:|||||||::.|..:|..|.:|::....:.:..|..|.::|||||..::.
Zfish   222 NNRKFVSVMSRTFYSLGLVLLPALAYYIPSWRNLQLAMTLPTFIFLIYHWVIPESPRWLLSQRKT 286

  Fly   313 EAALRQLLESATYNNRKVP-------LTLDVQ---LTMYANDLDQKSK-QKHSYCQVWDGETKRS 366
            :.||..:...|..|.|.:|       |.::.|   :.....||.:..| :||::           
Zfish   287 KEALSIVKSIAKCNKRSLPEDFHEMDLLIEKQEEIMRPSYKDLFKTPKMRKHTF----------- 340

  Fly   367 QLVYIHLIWGGAMVLYNIILLMIRNLGAQQVHVNTAAMGFAEMVGLFVGLYLI-------LYTRR 424
              :.|:..:.||:|...::|.:  .:....|.::.......|:....:..:|:       |....
Zfish   341 --ILIYAWFTGAVVFQGLVLRL--GITGDNVFLDFLISAVVELPTGLIFYFLVDRIGRRPLMATV 401

  Fly   425 HWRWAGNLMIIAGLSTYLIWLLPETERNSRRVGLELVFWLILKIANSASIAVLTTCTSEIVSKEK 489
            ::......:.:..:|..:.||        ||. :.:|..|.:.|.|.    .:....:|:.....
Zfish   402 NFIGGAACLAVPFISPNISWL--------RRT-IAIVGRLAVAIGNE----TVNFANTELYPTPL 453

  Fly   490 RVVLMLSVISFSRVCLLFCPF-LSCLTVIHHLVPITILATMGWIY-GLALRRLNRYYWNTEQPQI 552
            |.:.:....|.|.:..:..|| |..|..|...:|:.:...|..:| ||.:.          .|::
Zfish   454 RNLGVSVCSSASDIGAVVAPFILYRLASIWQELPLLVYGVMSVLYSGLVML----------LPEM 508

  Fly   553 SQVPTPNT 560
            ..|..|.|
Zfish   509 KGVDLPET 516

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4459NP_650850.1 2A0119 26..536 CDD:273328 115/560 (21%)
MFS 164..540 CDD:119392 86/395 (22%)
oct2NP_001107932.1 2A0119 12..516 CDD:273328 119/584 (20%)
MFS 123..506 CDD:119392 90/423 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170588697
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.840

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