DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4459 and Svopl

DIOPT Version :9

Sequence 1:NP_650850.1 Gene:CG4459 / 42377 FlyBaseID:FBgn0038753 Length:632 Species:Drosophila melanogaster
Sequence 2:XP_008761085.2 Gene:Svopl / 500085 RGDID:1566053 Length:446 Species:Rattus norvegicus


Alignment Length:419 Identity:94/419 - (22%)
Similarity:161/419 - (38%) Gaps:119/419 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   162 RVLVALTQSF--HALGALIGGLMA--YSALKKISPRRLMLLGMIGQIFCGNLTGLVDTYQLHIYF 222
            :|....|..|  :.:.:::.||:|  |...|      ::||..:...:...||....:|...::.
  Rat    37 QVAFVTTMVFFGYMVSSILFGLLADRYGRWK------ILLLSFLWGAYFSLLTSFSPSYIWFVFL 95

  Fly   223 RCLTSIFCALM-YTSGQFILNDITSGKARIIVVTLSELFW--------SMGLVLLPAISIYFDNW 278
            |  |.:.|.:. :..|..|..:....|.|..::.||::||        ||..|::|.|     .|
  Rat    96 R--TMVGCGVSGHAQGLIIKTEFLPTKYRGYMLPLSQVFWLAGSLLIISMASVVIPTI-----GW 153

  Fly   279 SYLYVAISSSLIVLVWLHRWIADAPRWLLQHQRVEAALRQLLESATYNNRKV--------PLTLD 335
            .:|....|...|:|:...::|.::.|:.:.....:||| ..|||....||.|        |:.  
  Rat   154 RWLIRIASIPGIILIMAFKFIPESARFNVSTGNTQAAL-DTLESIAKMNRSVMPEGRLVEPIL-- 215

  Fly   336 VQLTMYANDLDQKSKQKHSYCQVWDGETKRSQLVYIHLIW-GGAMVLYNIIL----LMIRNL--G 393
            .:...:|:.|:  ||...:..|:|             :|| |.:...|.:||    |:.|:|  |
  Rat   216 EKRGRFADLLE--SKYLRTTLQIW-------------IIWLGISFAYYGVILASAELLERDLVCG 265

  Fly   394 AQ-----QVHVNTAAMGFAEMVGLFVG---LYLILYTRRHWRWAGNLMIIAGLSTYLIWLLPETE 450
            ::     :|..|   ||.||     .|   .|..::....:|            |.:|..|.|..
  Rat   266 SKSESEPEVVEN---MGDAE-----EGRSPCYCHMFAPSDYR------------TMIISTLGEIA 310

  Fly   451 RN----------SRRVGLEL------VFWLILKIANS----------------ASIAVLTTCTSE 483
            .|          .||:.|.:      :|:|:|.|..|                |:...:...|:|
  Rat   311 LNPLNILGINFLGRRLSLSITMGCTALFFLLLNICTSSAGLIGFLFMLRALVAANFNTIYIYTAE 375

  Fly   484 IVSKEKRVVLMLSVISFSRVCLLFCPFLS 512
            :.....|.:.|.:..|..|:..:..||:|
  Rat   376 VYPTPMRALGMGTSGSLCRIGAMVAPFIS 404

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4459NP_650850.1 2A0119 26..536 CDD:273328 94/419 (22%)
MFS 164..540 CDD:119392 93/417 (22%)
SvoplXP_008761085.2 MFS_SVOPL 3..434 CDD:341000 94/419 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166347059
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.930

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