DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4459 and Orct2

DIOPT Version :9

Sequence 1:NP_650850.1 Gene:CG4459 / 42377 FlyBaseID:FBgn0038753 Length:632 Species:Drosophila melanogaster
Sequence 2:NP_001262907.1 Gene:Orct2 / 42890 FlyBaseID:FBgn0086365 Length:567 Species:Drosophila melanogaster


Alignment Length:546 Identity:119/546 - (21%)
Similarity:221/546 - (40%) Gaps:88/546 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 GSFGRWQLRTILLIFLCKIPSAW--FTAIIIYTAP-----YPWKG----ELVCHPADWNVSRSQT 79
            |.|||:|.....||.|..||.|:  ...:.:...|     .|::.    :|..|.  ||:|..:.
  Fly    11 GDFGRYQKIIYFLICLTSIPVAFHKLAGVFLLAKPDFRCALPFENGSSYDLPTHL--WNLSYPEN 73

  Fly    80 EHVDRNHPLWQDARSTDRLFNVDVCNAYSNSLARGFVRSHGQEWNASQSKEPGGQSSLPCEHVEH 144
            |...              .::||....|.|    |.:.....|.....|            :|..
  Fly    74 ERCS--------------YYDVDYTEEYLN----GSIPRSSNETKTCSS------------YVYD 108

  Fly   145 RTDY-KSLISQFDLICSRRVLVALTQSFHALGALIGGLMAYSALKKISPRRLMLLGMIGQIFCGN 208
            |:.| .|.:::::|:|.|..:.|.:.|...||.|:|.::......|...:.::...::.|:..|.
  Fly   109 RSKYLNSAVTEWNLVCGRDFMAATSDSLFMLGVLLGSIVFGQLSDKYGRKPILFASLVIQVLFGV 173

  Fly   209 LTGLVDTYQLHIYFRCLTSIFCALMY---TSGQFIL-----NDITSGKARIIVVTLSELFWSMGL 265
            |.|:...|        .|..|..||.   |||.|::     .::.....|:.......:|:|:|.
  Fly   174 LAGVAPEY--------FTYTFARLMVGATTSGVFLVAYVVAMEMVGPDKRLYAGIFVMMFFSVGF 230

  Fly   266 VLLPAISIYFDNWSYLYVAISSSLIVLVWLHRWIADAPRWLLQHQRVEAALRQLLESATYNNRKV 330
            :|....:.:..:|.:|.:|::...::.::.:..|.::.||||...|.:.|:..:.::|.:|..::
  Fly   231 MLTAVFAYFVHDWRWLQIALTLPGLIFMFYYWIIPESARWLLLKGRKDCAIANMQKAARFNKVEI 295

  Fly   331 PLTLDVQLTMYANDLDQKSKQKHSYCQ--------VWD---GETKRSQLVYIHLIWGGAMVLYNI 384
            ......:|.....:.::|:|||....:        |||   ....|.:.:.|.|.|.....:|..
  Fly   296 SDEALSELLDEGENSEEKAKQKLEDQELDEGPPPSVWDLFCYPNLRRKTLLIFLDWLVTSGVYYG 360

  Fly   385 ILLMIRNLGAQQVHVNTAAMGFAEMVGLFVGLYLILYTRRHWRWAG-----NLMIIAGLSTYLIW 444
            :.....|||. .|.:|....|..| :..::.|.|.|.     ||..     ..:::||||.....
  Fly   361 LSWNTSNLGG-NVLLNFVISGAVE-IPAYIFLLLTLN-----RWGRRSILCGCLVMAGLSLLATV 418

  Fly   445 LLPETERNSRRVGLELVFWLILKIANSASIAVLTTCTSEIVSKEKRVVLMLSVISFSRVCLLFCP 509
            ::|:     |...|.:...::.|:|.:||...:...::|......|.|.:.:....:|:..:..|
  Fly   419 IIPQ-----RMHTLIVACAMLGKLAITASYGTVYIFSAEQFPTVVRNVALGAASMVARISGMMAP 478

  Fly   510 FLSCLTVIHHLVPITILATMGWIYGL 535
            ||:.|..|...:|:.|..::..:.||
  Fly   479 FLNFLATIWKPLPLLICGSLTLVAGL 504

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4459NP_650850.1 2A0119 26..536 CDD:273328 119/546 (22%)
MFS 164..540 CDD:119392 86/396 (22%)
Orct2NP_001262907.1 2A0119 11..520 CDD:273328 119/546 (22%)
MFS 127..503 CDD:119392 84/395 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45450238
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D704438at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24064
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.950

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