DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4459 and CG42269

DIOPT Version :9

Sequence 1:NP_650850.1 Gene:CG4459 / 42377 FlyBaseID:FBgn0038753 Length:632 Species:Drosophila melanogaster
Sequence 2:NP_648019.2 Gene:CG42269 / 38689 FlyBaseID:FBgn0259164 Length:662 Species:Drosophila melanogaster


Alignment Length:577 Identity:116/577 - (20%)
Similarity:233/577 - (40%) Gaps:107/577 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MTDSQSMGSIPRKSSPELDVVEQVNGSFGRWQLRTILLIFLCKIPSAWFTAIIIYTAPY------ 59
            |.......|:|  .|.:.|.:..:.|.|||:|    .|:|:|.||.::|.|.:.::..:      
  Fly    57 MAGGNGSDSLP--PSMDFDDILPLIGEFGRYQ----KLLFICMIPFSFFVAFVYFSQIFLTLIPE 115

  Fly    60 -PWKGELVCHPADWNVSRSQTEHVDRNHPLWQDARSTDRLFNVDVCNAYSNSLARGFVRS----- 118
             .|     ||..:.: .......:..:.|:.....:...:::|:    |::.||:|.|.:     
  Fly   116 QHW-----CHVPELD-GLDVEARLALSIPMTNGEYNNCYMYDVN----YTDILAQGKVMADPKWP 170

  Fly   119 -----HGQEWNASQSKEPGGQSSLPCEHVEHRTDYKSLISQFDLICSRRVLVALTQSFHALGALI 178
                 ||..:|.::         :|         |.::.::.:.:|....|....||...|||::
  Fly   171 QVKCRHGWSYNFTE---------IP---------YATVATEQNWVCDDAALPTYAQSIFFLGAIV 217

  Fly   179 GGLM------AYSALKKISPRRLM-LLGMIGQIFCGNL--TGLVDTYQLHIYFRCLTSIFCALMY 234
            |||:      .:..:..:....:| ||..:|..|..|.  ..::..:....:..|.|     :||
  Fly   218 GGLLFGWVADRFGRIPALIGTNMMGLLAGVGTAFVSNFWEFAIMRFFVGFAFDNCFT-----MMY 277

  Fly   235 TSGQFILNDITSGKARIIVVTLS-ELFWSMGLVLLPAISIYFDNWSYLYVAISSSLIVLVWLHRW 298
                .::.:....|.|..|..:| .:|::....|||.|:.:..:|..|.:..|:.|::.::....
  Fly   278 ----ILVLEYVGPKYRTFVANMSIAIFFTGAACLLPWIAYFLADWKLLAIVTSAPLLLAIFTPFV 338

  Fly   299 IADAPRWLLQHQRVEAALRQLLESATYNNRKVPLTLDVQLTMYANDLDQKSKQ--KHSYCQVWDG 361
            :.::.|||:...:|:.|:..|.:....|.|:||.......|.....:.::..|  |:|...::..
  Fly   339 VPESARWLVSQGKVDKAVGILKKLEKGNGRQVPPQTYQIFTDSCKRMQEQEAQNGKYSVLDLFKS 403

  Fly   362 ETKRSQLVYIHLIWGGAMVLYNIILLMIRNLGAQQVHVNTAAMGFAEMVGLFVGLYLILYTRRHW 426
            ...|...:.:.:||....::::..:..:.:||.......|.|. |.|:..  ..|..::..|...
  Fly   404 PRLRRTTLLLIVIWMAISLVFDGHVRNVGSLGLDIFFTFTLAC-FTELPA--DTLLTVILDRFGR 465

  Fly   427 RW-AGNLMIIAGLSTYLIWLLPETERNSRRVGLELVFWLILKIANSASIAVL------------T 478
            || |.:.|:::|:.:.|..::|        ||:           .||::|::            .
  Fly   466 RWLACSSMVLSGVFSLLATVVP--------VGI-----------YSAALAIMGRFFVNISYNIGL 511

  Fly   479 TCTSEIVSKEKRVVLMLSVISFSRVCLLFCPFLSCLTVIHHLVPITILATMGWIYGL 535
            ...:|::....|...:..:.....|..:..||:..|..|...:|:.||..:|.|.||
  Fly   512 QWAAEVLPTVVRAQAVAFIHIMGYVASIIAPFVVYLANISQALPLIILGILGIIGGL 568

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4459NP_650850.1 2A0119 26..536 CDD:273328 111/552 (20%)
MFS 164..540 CDD:119392 83/397 (21%)
CG42269NP_648019.2 2A0119 80..552 CDD:273328 104/534 (19%)
MFS 206..545 CDD:119392 73/369 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45458363
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24064
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

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