DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4459 and CG5592

DIOPT Version :9

Sequence 1:NP_650850.1 Gene:CG4459 / 42377 FlyBaseID:FBgn0038753 Length:632 Species:Drosophila melanogaster
Sequence 2:NP_647996.1 Gene:CG5592 / 38662 FlyBaseID:FBgn0035645 Length:540 Species:Drosophila melanogaster


Alignment Length:561 Identity:98/561 - (17%)
Similarity:214/561 - (38%) Gaps:145/561 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 GSFGRWQLRTILLIFLCKIPSAWFTAIIIYTAPYPWKGELVCHPAD-WNVSRS-----QTEHVDR 84
            |.||.:|.|  ||.::  :|:|:..|...:...:     ::..|.: |...|.     ::|..:|
  Fly    17 GDFGPFQKR--LLFWM--MPAAFLFAFTYFGQIF-----MILLPKNHWCRVRELEGLPESEQKNR 72

  Fly    85 NHPLWQDARSTDRLFNVDVCNAYSNSLARGFVRSHGQEWNASQSKEPGGQSSLPCEH--VEHRTD 147
            ..|..||. |.:..|..:|  .|.::...          :|:|::.|     :||.:  :..|.:
  Fly    73 GIPKKQDG-SFENCFMYNV--PYDSNATN----------DANQTRSP-----IPCNNGWIYDRKE 119

  Fly   148 --YKSLISQFDLICSRRVLVALTQSFHALGALIGGLMAYSALKKISPRRLMLLGMIGQIFCGNLT 210
              |:|:.::::.:|.:|.....:...:.:|.:: |.:.:..:...|       |.:..:|..|..
  Fly   120 VPYESIATEYNWVCDKRDFGTYSVVVYFVGCIV-GCLCFGFITDHS-------GRLPALFLANSC 176

  Fly   211 GLVDTYQLHIYFRCLTSI------FCALMYTSGQ---------FILNDITSG-KARIIVVTLS-E 258
            .::.        .|::.:      |.|..:.:|.         :||.....| |.|.:|..|: .
  Fly   177 SMIG--------GCVSVVCKDFPCFAASRFVAGLSMNYCFVPIYILTLENVGIKYRTLVGNLALT 233

  Fly   259 LFWSMGLVLLPAISIYFDNWSYLYVAISSSLIVLVWLHRWIADAPRWLLQHQRVEAALRQLLESA 323
            .|:::|..|||.::....||.:..:.::..::.::.......::|.||:...:|:..:..:.|:|
  Fly   234 FFFTLGACLLPWLAYVISNWRHYAMVVALPIVFMILTSLLAPESPSWLMSVGKVDRCIEVMKEAA 298

  Fly   324 TYNNRKVPLTLDVQLTM-------YANDLDQKSKQKHSYCQVWDGETKRSQLVYIHLIWGGAMVL 381
            ..|.:.:  :.:|...|       :||  :|..|| ::...::....:...|..:.:.|....:.
  Fly   299 KANGKII--SEEVWSEMRECYELKFAN--EQLGKQ-YTSLDLFKTFPRLVVLTILIVTWMTVALA 358

  Fly   382 YN-----------------------------IILLMIRNLGAQQVHVNTAAMGFAEMVGLFVGLY 417
            |:                             :.:|::..:|.:.  :.:|.|.......||||: 
  Fly   359 YDAHVRVVEILDTDIFITFSLSSLVEIPAGIVPMLLLDRIGRKP--MMSAVMLLCAASSLFVGI- 420

  Fly   418 LILYTRRHWRWAGNLMIIAGLSTYLIWLLPETERNSRRVGLELVFWLILKIANSASIAVLT---- 478
                .:.||. |....|.|.....:.:          .||.:....::..:.....:|::.    
  Fly   421 ----LKGHWN-ASTAAIAARFFATMAY----------NVGQQWASEILPTVLRGQGLAIINIMGQ 470

  Fly   479 --TCTSEIVSKEKR--------VVLMLSVISFSRVCLLFCP 509
              ...|.:|....|        ::.::|||  ..:.:||.|
  Fly   471 MGALLSPLVLSTHRYYRPLPMFIITLVSVI--GALIILFLP 509

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4459NP_650850.1 2A0119 26..536 CDD:273328 98/561 (17%)
MFS 164..540 CDD:119392 66/413 (16%)
CG5592NP_647996.1 2A0119 17..519 CDD:273328 98/561 (17%)
MFS 141..509 CDD:119392 65/408 (16%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45458365
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24064
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

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