DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4459 and CG8654

DIOPT Version :9

Sequence 1:NP_650850.1 Gene:CG4459 / 42377 FlyBaseID:FBgn0038753 Length:632 Species:Drosophila melanogaster
Sequence 2:NP_001246441.1 Gene:CG8654 / 37275 FlyBaseID:FBgn0034479 Length:502 Species:Drosophila melanogaster


Alignment Length:608 Identity:122/608 - (20%)
Similarity:212/608 - (34%) Gaps:181/608 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MTDSQSMGSIPRKSSPEL----DVVEQVNGSFGRWQLRTILLIFLCKIPSAWFT-AIIIYTAPYP 60
            |.|.......|:...|..    .::.|: |.|.|:||....::.|||..:.|.| ..|...||.|
  Fly     1 MADRPQDPKAPKPLKPVTKTGDPIISQI-GDFRRYQLFFFFIVLLCKFGTGWHTLGHIFLAAPTP 64

  Fly    61 WKGELVCHPADWNVSRSQTEHVDRNHPLWQDARSTDRLFNVDVCNAYSNSLARGFVRSHGQEWNA 125
                |.|          :||:|                  .|.|                     
  Fly    65 ----LSC----------KTENV------------------TDPC--------------------- 76

  Fly   126 SQSKEPGGQSSLPCEHVEHRTD--YKSLISQFDLICSRRVLVALTQSFHALGALIGGLMAYSALK 188
                      |..|...|..|.  ..::|::::|.|..:.|.:|:||...||.|.|.::......
  Fly    77 ----------SDECSETEFDTSVFQSTIITEWNLTCESKQLASLSQSIVMLGILFGSILFGMFAD 131

  Fly   189 KISPRRLMLLGMIGQIFCGNLTGLVDTYQLHIYFRCLTSIFCALMYTSGQFILNDITSGKARIIV 253
            :...|...|.....|:..|.:..:...|..:..||.|.::..|...|:...:|.:|...|.|.:|
  Fly   132 RYGRRPAFLTCCFMQLITGLIVCVSPYYWFYCLFRFLVAVATAGTMTTSFVLLMEIVGPKKREMV 196

  Fly   254 VTLSELFWSMGLVLLPAISIYFDNWSYLYVAI---SSSLIVLVWLHRWIADAPRWLLQHQRVEAA 315
            ..|.::.:::|...|...:.:...|.:...:|   |...::.:||   :.::||||....:::.:
  Fly   197 AILYQIPFNIGHASLALFAYFIREWRWFQFSITIFSIVFVIYIWL---VPESPRWLFTTGKLDKS 258

  Fly   316 LRQLLESATYNNRKVPLTLDVQLTMYANDLDQKSKQKHSYCQVWDGETKRSQLVYIHLIWGGAMV 380
            ::.|.:.|..|  |.|.                             ||.|.::...:    ||:.
  Fly   259 IKILEKIAKCN--KAPT-----------------------------ETIRPEIEAAY----GALA 288

  Fly   381 LYNIILLMIRNLGAQQVHVNTAAMGFAEMVGLFVGLYL---ILYTRRHWRWAGNLMIIAGLSTYL 442
                        ..|.|...|       :|.||...|:   .::...:|...  .|:..|.:.|:
  Fly   289 ------------ARQPVKKGT-------VVDLFRTPYMRIKTIFMANNWLVV--CMVYYGTAQYV 332

  Fly   443 IWLLPETERNSRRVGLELVFWLILKIANSASIAVLTTCTSEIVSK---EKRVVLMLSVISFSRVC 504
            ..|...               :.:..|.:|.:.:..||...:::|   .|:.:|:.:..|...:.
  Fly   333 SALGGN---------------IFISNAIAAGVGIPGTCLCALMTKYLGRKKTLLLSNGCSALGLI 382

  Fly   505 LLFCPFLSCLTVIHHLVPITILATMGWIYGLALRRLNRYYWNTEQPQISQVPTPNTYRRQSAIIL 569
            |     |:||:.....|.:| .||:| ::|.::...|.|.:..|     ..|   |..|.|.:.|
  Fly   383 L-----LACLSTQAEAVRVT-CATIG-LFGASITFPNVYLYGGE-----LFP---TVVRSSGVGL 432

  Fly   570 RRCSTVSS----------DCSAY 582
              ||.|..          |.:||
  Fly   433 --CSMVGRIGSIVAPLIVDLAAY 453

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4459NP_650850.1 2A0119 26..536 CDD:273328 103/521 (20%)
MFS 164..540 CDD:119392 75/384 (20%)
CG8654NP_001246441.1 SP 85..487 CDD:273317 93/460 (20%)
MFS 87..477 CDD:119392 93/458 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24064
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.010

Return to query results.
Submit another query.