DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4459 and CG4630

DIOPT Version :9

Sequence 1:NP_650850.1 Gene:CG4459 / 42377 FlyBaseID:FBgn0038753 Length:632 Species:Drosophila melanogaster
Sequence 2:NP_001260948.1 Gene:CG4630 / 36458 FlyBaseID:FBgn0033809 Length:582 Species:Drosophila melanogaster


Alignment Length:578 Identity:114/578 - (19%)
Similarity:235/578 - (40%) Gaps:98/578 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 DVVEQVNGSFGRWQLRTILLIFLCKIPSAWFTAIIIYTAPYP--------------------WKG 63
            |::.:: |.|||:|.|..|||.|..:.:|..:...::||..|                    |..
  Fly    17 DILVEI-GEFGRFQRRNYLLICLPVLFAAANSLSYVFTAGSPTYRCYVPECDKLVDAEYGANWVS 80

  Fly    64 ELVCHPADWNVSRSQTEHVDRNHPLWQDARSTDRLFNVDVCNAYSNSLARG-FVRSHGQEWNASQ 127
              :..|..|:         .|.|            |....|..:   :|.| .:.|....|:|..
  Fly    81 --IAVPGSWS---------KRGH------------FTPSTCERF---VANGDHLESSSDPWSAWP 119

  Fly   128 SKEPGGQS----SLPCEHVEHRTDYKSLISQFDLICSRRV-LVALTQSFHALGALIGGLMAYSAL 187
            ..:...::    :..|....:.:..::::.|:.|.|...: .:|...:.|..|.::|..::....
  Fly   120 LDQCFAENFTTETERCNQFVYGSSERTIVQQWGLQCPENLWKLAFVGTIHFAGLVVGTALSGYLA 184

  Fly   188 KKISPRRLMLLGMIGQIFCGNLTGLVDTYQLHIYFRCLTSIFCALMYTSGQFILNDITSGKARII 252
            .:...:.:.|..::.....|....|...|...::|..|.::..:.:|.....|..::...:.|.:
  Fly   185 DRYGRKHIFLFCIVFMALTGVAQALSWDYISFLFFALLNAVGTSGVYPLAFIIGVEMVGPRKREM 249

  Fly   253 VVTLSELFWSMGLVLLPAISIYFDNWSYLYVAISSSLIVLV---WLHRWIADAPRWLLQHQRVEA 314
            ...:...|:::|..|| .:|::..:|..|.:|:|...::.|   ||   :.::.||||...|.|.
  Fly   250 SSIVLNYFYAVGEALL-GLSVFLPDWRQLQLALSVPPLICVAYFWL---VPESVRWLLARNRREQ 310

  Fly   315 ALRQLLESATYNNRKVPLTLDVQLTMYANDLDQKSKQKHSY---------CQVWDG--ETKRSQL 368
            |...:..:|..|.|.:  ::::..:....:||.::.|:...         .::|..  |..||.:
  Fly   311 AGVIIRRAAKVNRRDI--SVELMASFKQQELDAETGQEDDVEGGLHVKKDDKIWLAVKEVARSHI 373

  Fly   369 V-----YIHLIWGGAMVLYNIILLMIRNLGAQQVHVNTAAMGFAEMVGLFVGLYLILYTRRHWR- 427
            :     .:.|||....::|..:.|...:|...: ::|.|.:...|:.|..:..   |:.||..| 
  Fly   374 LMGRYAILLLIWAVNAIVYYGLSLNATSLSGNK-YLNFALVCLVEIPGYSLAW---LFLRRFGRR 434

  Fly   428 --WAGNLM------IIAGLSTYL--IWLLPETERNSRRV-----GLELVFWLILKIANSASIAVL 477
              .:|:|:      :.:|..|..  .|:..:|...||..     .|.:..:|:.|:..::|.||:
  Fly   435 VALSGSLLLCSITCVASGFVTLAQGDWIPCQTGVESRHSWSCANWLVVTLFLVGKLGITSSFAVI 499

  Fly   478 TTCTSEIVSKEKRVVLMLSVISFSRVCLLFCPFLSCLTVIHHLVPITILATMGWIYGL 535
            .|.|:|::....|...:..:.:|:|...:..||:..|...:..:|:.:..|:..:.||
  Fly   500 YTFTAEMMPTVIRSGGVGVMSTFARFGAMLAPFVPLLASYYDPLPLLLFGTLSLVAGL 557

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4459NP_650850.1 2A0119 26..536 CDD:273328 113/571 (20%)
MFS 164..540 CDD:119392 83/407 (20%)
CG4630NP_001260948.1 2A0119 23..573 CDD:273328 113/571 (20%)
MFS 158..533 CDD:119392 77/384 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45458329
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D704438at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24064
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.950

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