DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4459 and Ust5r

DIOPT Version :10

Sequence 1:NP_650850.1 Gene:CG4459 / 42377 FlyBaseID:FBgn0038753 Length:632 Species:Drosophila melanogaster
Sequence 2:NP_599207.2 Gene:Ust5r / 171398 RGDID:620985 Length:552 Species:Rattus norvegicus


Alignment Length:539 Identity:102/539 - (18%)
Similarity:207/539 - (38%) Gaps:131/539 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 DVVEQVNGSFGRWQLRTILLIFLCKIPSAWFTAIIIYTAPYP----WKGELVCHPADWNVSRSQT 79
            :::.|| ||.||:|:..:..:||..:.....:.|..:||..|    |.      |...||:    
  Rat     5 ELLNQV-GSLGRFQILQMAFVFLINVSVVPHSTIENFTAAIPSHRCWV------PILDNVT---- 58

  Fly    80 EHVDRNHP--LWQD-----ARSTDRLFNVDVCNAYSNSLARGFVRSHGQEWNASQSKEPGGQSSL 137
              |..||.  |.||     :...|....:|.|..::..      :.|..:.|.:.|......:. 
  Rat    59 --VSDNHSRILNQDKLLKISIPLDSHLRLDKCRRFAQP------QWHLLDLNDTFSSVTEADTE- 114

  Fly   138 PCEH--VEHRTDYKS-LISQFDLICSRRVLVALTQSFHALGALIGGLMAYSALKKISPRRLMLLG 199
            ||..  |..|:::.| .::::||:|..:||.::|:....:||.|||::......:...:.::...
  Rat   115 PCVDGWVYDRSNFHSTTVTEWDLVCESQVLNSVTKFSFMIGAFIGGIVNGPLSDRFGRKFVLKCA 179

  Fly   200 MIGQIFCGNLTGLVDTYQLHIYFRCLTSIFCALMYTSGQFILNDITSGKARIIVVTLSELFWSMG 264
            ::.........|....:.::...|.|..:....:..:...::.:.||.|...::..::....|.|
  Rat   180 LLQMAITETCVGFASNFFIYCSLRFLAGMTFEPILVNSNLLMFEWTSHKFLAMMSVIAPCAGSFG 244

  Fly   265 LVLLPAISIYFDNWSYLYVAISSSLIVLVWLHRWIADAPRWLLQHQRVEAALRQLLESATYNNRK 329
            .::|..::..|.||.:|.:|:|..:...:.|.||::::.|||:...:.:..|::|.:.|..|..|
  Rat   245 SMILAGLAFQFQNWHHLQLAMSVPIFFFLILTRWLSESARWLIVTNKPQKGLKELRKVAHMNGMK 309

  Fly   330 VP---LTLDVQLTMYANDLDQKSKQKHSYCQVWDGETKR-------------------------- 365
            ..   ||::|..|....:| :.:|.:.|...::.....|                          
  Rat   310 NSGDNLTMEVVRTSMKREL-EAAKARPSPRDLFHTPILRKRICAMSFMRILFMLSIFGMSLHLQH 373

  Fly   366 --SQLVYIHLIWGGAMVLYNII----------------LLMIRNL-------------------- 392
              |.::.:..:...:.:|:::|                ::.:|.:                    
  Rat   374 LSSNIMLLQFVVSASSLLFSVIGPYVFNRMGRRITQMVVMTLRGICILTAVFVPQEMQILRITVV 438

  Fly   393 -----------GAQQVHVN--------TAAMGFAEMVG----LFVGLYLILYT---RRHWRWAGN 431
                       |..::|.|        ..|:|...|.|    ....|::||.:   ...|.:.|.
  Rat   439 TLAGAFSALSFGVNRLHTNELLPTTLRATAIGVIGMFGNSGFFLAPLFMILASYSPNLPWIFYGG 503

  Fly   432 LMIIAGLSTYLIWLLPETE 450
            ..|:.|   :.::|||||:
  Rat   504 FSILNG---FTVFLLPETK 519

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4459NP_650850.1 MFS_SLC22 139..540 CDD:340875 72/408 (18%)
Ust5rNP_599207.2 MFS_OAT 109..516 CDD:340932 69/411 (17%)

Return to query results.
Submit another query.