DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4459 and Slc22a13

DIOPT Version :9

Sequence 1:NP_650850.1 Gene:CG4459 / 42377 FlyBaseID:FBgn0038753 Length:632 Species:Drosophila melanogaster
Sequence 2:NP_598741.2 Gene:Slc22a13 / 102570 MGIID:2143107 Length:551 Species:Mus musculus


Alignment Length:580 Identity:126/580 - (21%)
Similarity:230/580 - (39%) Gaps:80/580 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 GSFGRWQLRTILLIFLCKIPSAWFTAIIIYTAPYPWKGELVCHPADWNVSRSQTEHVDRNHPLWQ 90
            |.|||:|:|   |..|..||: :..|..|:...:....|.......|          .:||    
Mouse    12 GDFGRFQVR---LTILMGIPN-FLAAFFIFGQVFMVLDEAHHCSVSW----------VKNH---- 58

  Fly    91 DARSTDRLFNVDVCNAYSNSLARGFVRSHGQEWNASQSKEPGGQSSLPCEHVEHR---------- 145
                   .||:......:.|:...   :.|:..:....:.|...:||. :.:.||          
Mouse    59 -------TFNLSAAEQLAISIPND---TAGRPESCLMFRPPPDSASLE-DILSHRFNETQACDSG 112

  Fly   146 TDY-----KSLISQFDLICSRRVLVALTQSFHALGALIGGLMAYSALKKISPRRLMLLGMIGQIF 205
            .||     :||..:|||:|.|:.|...:||....|.|:|.|:.......|..|..:|:.::....
Mouse   113 WDYPENRPQSLKKEFDLVCDRKNLKKTSQSVFMAGLLVGALVFGPVCDWIGRRPSLLMQVLLSGI 177

  Fly   206 CGNLTGLVDTYQLHIYFRCLTSIFCALMYTSGQFILNDITSGKARIIVVTLSELFWSMGLVLLPA 270
            ....|..|.:::|::..|.:.:...|....|...::::......|...|.|::...::|.::|..
Mouse   178 TSMATAFVSSFELYLALRFVLATANAGFLLSTNVLISEWVGPSWRTQAVVLAQSNVALGQMVLAG 242

  Fly   271 ISIYFDNWSYLYVAISSSLIVLVWLHRWI-ADAPRWLLQHQRVEAALRQLLESATYNNRKVPLTL 334
            ::....||..|.:. .::.::|::.:.|: .::|||||...|.|.|.:.:.::|..|.|.:...|
Mouse   243 LAYGVRNWRLLQIT-GTAPVLLLFFYFWVLPESPRWLLSQGRTEEAKQLVQKAALVNGRPLSPEL 306

  Fly   335 DVQLTMYANDLDQKSKQKHSYCQVWDGETKRSQLVYIHLIWGGAMVLYNIILLMIRNLGAQQVHV 399
            ..||      :.:|:....:...::.....|...:.:..:|....::|..:...:.:.|. .::|
Mouse   307 LNQL------VPEKTGPSGNALDLFRHPHLRKVTLILIAVWFVDSLVYYSLSFQVGDFGL-DIYV 364

  Fly   400 NTAAMGFAEMVGLFVGLYLILYTRRHWRWAGNLMIIAGLSTYLIWLLPETERNSRRVG----LEL 460
            .....|..||.|.|:.:.::....|.|.....| .:||:...:|..:|         |    :..
Mouse   365 TQLIFGAVEMPGRFLSVLMMEKLGRKWSQLCTL-TLAGIMYIIIIFIP---------GDLPTVVT 419

  Fly   461 VFWLILKIANSASIAVLTTCTSEIVSKEKRVVLMLSVISFSRVCLLFCPFLSCLTVIHHLVPITI 525
            |..::.|.|::|:..:....|:|:.....|...|..|..||||..:..|.:..|...|..:|:.|
Mouse   420 VLAVVGKFASAAAFTISYVYTAELFPTIIRQTGMGLVSIFSRVGGIITPLVMLLEQYHQAIPMVI 484

  Fly   526 LATMGWIYGLALRRLNRYYWNT--------EQ--PQISQVPTPNTYRRQSAIILRRCSTV 575
            ..::....||....|......|        ||  |..|....|   :||....|.|.|:|
Mouse   485 FGSLPIGAGLLCALLPETRGQTLKDTLQDLEQGLPAGSHKTAP---QRQDMEALGRTSSV 541

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4459NP_650850.1 2A0119 26..536 CDD:273328 112/529 (21%)
MFS 164..540 CDD:119392 79/380 (21%)
Slc22a13NP_598741.2 2A0119 12..510 CDD:273328 115/544 (21%)
MFS 139..500 CDD:119392 78/378 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167843564
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.840

Return to query results.
Submit another query.