DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4770 and FAR1

DIOPT Version :10

Sequence 1:NP_650848.1 Gene:CG4770 / 42375 FlyBaseID:FBgn0038751 Length:490 Species:Drosophila melanogaster
Sequence 2:NP_001428171.1 Gene:FAR1 / 84188 HGNCID:26222 Length:518 Species:Homo sapiens


Alignment Length:511 Identity:158/511 - (30%)
Similarity:262/511 - (51%) Gaps:44/511 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 DIYQDAVVFITGATGFVGKSLLEKLLWSFPQIKRIYMLIRPKGGVTVEERFRGFLQNPIFERIKS 78
            :.|:...|.:||||||:||.||||||.|.|::..:|:|:|.|.|.|.:||....|...:|:|::.
Human     6 EYYEGKNVLLTGATGFLGKVLLEKLLRSCPKVNSVYVLVRQKAGQTPQERVEEVLSGKLFDRLRD 70

  Fly    79 EHPTQLKKIFHFSGNIEDDNLGLNESDRSVLCAEVNIIFHSAATVRFNECLKVSARVNSQATYNL 143
            |:|...:||...:..:....|.|:|.|:.|:....|||||.||||||||.|:.:.::|..||..|
Human    71 ENPDFREKIIAINSELTQPKLALSEEDKEVIIDSTNIIFHCAATVRFNENLRDAVQLNVIATRQL 135

  Fly   144 LELCRQMPYLRSFLYVSTAYCNPGRKYVDEQVYPTMPPVDWRQFLSATQKIPDDYLNRLADYIKG 208
            :.|.:||..|..|::|||||....||::||.|||  ||||.::.:.:.:.:.|..:|.:...:.|
Human   136 ILLAQQMKNLEVFMHVSTAYAYCNRKHIDEVVYP--PPVDPKKLIDSLEWMDDGLVNDITPKLIG 198

  Fly   209 PHVNTYTFTKSIAEQIVNAYKDVIPIVIVRPSIVTAAYREPYPGWIDNIQAISGIMMEIGKGGIS 273
            ...|||.:||::||.:|......:.:.|||||||.|:::||:||||||....||:.:..|||.:.
Human   199 DRPNTYIYTKALAEYVVQQEGAKLNVAIVRPSIVGASWKEPFPGWIDNFNGPSGLFIAAGKGILR 263

  Fly   274 SILGNKDLICDIIPVDFVVNAMIMMVGKAKLG------SLSICNATSGVTNPITWQHLGELTMKW 332
            :|..:.:.:.|::|||.|||..:.....:.:.      ::.:.|.|:|.|||..|..:....:..
Human   264 TIRASNNALADLVPVDVVVNMSLAAAWYSGVNRYMRPRNIMVYNCTTGSTNPFHWGEVEYHVIST 328

  Fly   333 SRIYPTRRMIMFPNFKYRCSAFNHELAVWVLHFVPALLMDLQTLLLAQKKRLVTPIAKKFRQACL 397
            .:..|..:....||.....:...:...:.|.|..||.|.|:...:..:..|::..|. :..:|.:
Human   329 FKRNPLEQAFRRPNVNLTSNHLLYHYWIAVSHKAPAFLYDIYLRMTGRSPRMMKTIT-RLHKAMV 392

  Fly   398 AGSFFSLNEWIFKNKSRFYFKEMIENGTYP----TLYWNLEEMDYDEYVRRHMIGINKYLHREKF 458
            ...:|:.|.|::..::    ..|:.|...|    |...::.::.:.||:..:.:|..||:..|:.
Human   393 FLEYFTSNSWVWNTEN----VNMLMNQLNPEDKKTFNIDVRQLHWAEYIENYCLGTKKYVLNEEM 453

  Fly   459 T------VDSNK-------------FMVTRIYW--------FWIFLHLMFYMMLVY 487
            :      ...||             .::.||:.        .|.|:..:.|..|.|
Human   454 SGLPAARKHLNKLRNIRYGFNTILVILIWRIFIARSQMARNIWYFVVSLCYKFLSY 509

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4770NP_650848.1 FAR-N_SDR_e 21..337 CDD:187547 123/321 (38%)
Sterile 363..455 CDD:460779 20/95 (21%)
FAR1NP_001428171.1 Necessary and sufficient for PEX19-mediated localization into peroxisome membrane. /evidence=ECO:0000269|PubMed:24108123 454..510 9/56 (16%)

Return to query results.
Submit another query.