DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4770 and CG1441

DIOPT Version :10

Sequence 1:NP_650848.1 Gene:CG4770 / 42375 FlyBaseID:FBgn0038751 Length:490 Species:Drosophila melanogaster
Sequence 2:NP_610535.1 Gene:CG1441 / 36029 FlyBaseID:FBgn0033464 Length:517 Species:Drosophila melanogaster


Alignment Length:529 Identity:159/529 - (30%)
Similarity:264/529 - (49%) Gaps:85/529 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MDNAEVSTVEHQTDIYQDAVVFITGATGFVGKSLLEKLLWSFPQIKRIYMLIRPKGGVTVEERFR 65
            :|:.||..:   .:.::...:||||.|||:||.|:||||.|...:||||:|||||.|...:||.:
  Fly    20 IDDNEVDRI---AECFKGRSLFITGGTGFLGKVLVEKLLRSCGGLKRIYLLIRPKKGKDPQERIK 81

  Fly    66 GFLQNPIFERIK----SEHPTQLKKIFHFSGNIEDDNLGLNESDRSVLCAEVNIIFHSAATVRFN 126
            ...||.:|:::|    .||  .|:::...:|::....||::|.|...|..||:|::|.||||||:
  Fly    82 DIFQNVLFDQVKQMRGEEH--ILQQVVAIAGDVLSPGLGISEKDLETLRQEVSIVYHCAATVRFD 144

  Fly   127 ECLKVSARVNSQATYNLLELCRQMPYLRSFLYVSTAYCNPGRKYVDEQVYPTMPPVDWRQFLSAT 191
            |.|:.:..:|::.|..:|||...:.:|..|.|.|||||:...|.:.|:.|.  ||.|..:.:.|.
  Fly   145 EPLRNAVFMNTRGTKYMLELALTLKHLDFFAYCSTAYCHLHVKTLYEKPYD--PPADPHKVMQAC 207

  Fly   192 QKIPDDYLNRLADYIKGPHVNTYTFTKSIAEQIVNAYKDVIPIVIVRPSIVTAAYREPYPGWIDN 256
            :.:.||.:..:...:.|...|||.:|||:||.:|....:.:|.||:|||||...::||.|||.||
  Fly   208 EWLTDDEVATIERKVLGAIPNTYAYTKSLAEALVVEKFEELPAVILRPSIVIPIWKEPIPGWTDN 272

  Fly   257 IQAISGIMMEIGKGGISSILGNKDLICDIIPVDFVVNAMIMMVGKAKLGSLSICNATSGV--TNP 319
            |...:|:::..|||.|.::..|.....|.:|||..||.:::         .|..|.|:|.  ||.
  Fly   273 INGPTGLLIGAGKGVIRTMYCNSSGYGDFLPVDVAVNGILV---------ASWRNITAGTDKTNR 328

  Fly   320 ITWQHL---GELTMKWSRIYPTRRMIM-----------FPNFKYRCSAFNHELAVWVLHFVPALL 370
            :.  |:   .::.:.|:.|....|.::           :|....:.:.:.|.:.:.:..::|||.
  Fly   329 VA--HMTSSNDIKVSWAEIIELGRWVIENKVPLNGVAWYPGGSMKSNYWVHFICMVLFQWMPALF 391

  Fly   371 MDLQTLLLAQKK---RLVTPIAKKFRQACLAGSFFSLNEWIFKNKSRFYFKEMIEN---GTYPTL 429
            :|....:|....   |:...|.|.|.    ...:::.|.|.|.|......::::.|   .||...
  Fly   392 VDALLWILRYPPVLCRVQNRIYKGFE----VFEYYANNVWNFDNSEAVKLRKLMNNKERRTYVIE 452

  Fly   430 YWNLEEMDY----------------DEYV---RRHMIGINKYLHREKFTVDSNKFMVTRIY-WFW 474
            ...|:.:||                ||.:   ||||    |.:           ::|.::| ..|
  Fly   453 KIELDLIDYFTNCVLCARRLILKESDESIPAARRHM----KVM-----------WVVDKVYKGIW 502

  Fly   475 IF--LHLMF 481
            ||  |::::
  Fly   503 IFGILYMLY 511

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4770NP_650848.1 FAR-N_SDR_e 21..337 CDD:187547 121/324 (37%)
Sterile 363..455 CDD:460779 26/116 (22%)
CG1441NP_610535.1 FAR-N_SDR_e 35..348 CDD:187547 121/327 (37%)
Sterile 384..475 CDD:460779 19/94 (20%)

Return to query results.
Submit another query.