DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4465 and OCT1

DIOPT Version :9

Sequence 1:NP_650847.1 Gene:CG4465 / 42374 FlyBaseID:FBgn0038750 Length:577 Species:Drosophila melanogaster
Sequence 2:NP_565059.2 Gene:OCT1 / 843656 AraportID:AT1G73220 Length:539 Species:Arabidopsis thaliana


Alignment Length:652 Identity:145/652 - (22%)
Similarity:215/652 - (32%) Gaps:249/652 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 PNIRRNSPAPLDLGHMAHSFTCTDPKANEVSPQTPHPKANNLADDNDDDVITHIMGNFGPWQLRS 76
            |||..:|.|               .:..|.:.|...|  ||......|:||...:|..|..|:..
plant    16 PNISNDSSA---------------TEKGEATRQQQLP--NNRYALTVDEVIEQHIGALGFAQILH 63

  Fly    77 LLILFLCKI---------------PAAWFMA----------CILFTAPDLYPEEEYKCDTTAFGP 116
            .|::.:..|               |||..:|          |.|.:.     |.|:      .||
plant    64 ALLVSIAWIFDAQTTLISIFSDAQPAARLLATGAIVEGASLCGLASG-----EWEW------IGP 117

  Fly   117 DVNSTVSLDHCYVMVNYGESAYAMRQCRKFLYTTGFHSLTMEFDLVCLCDFFVAWSQYWHLFGLL 181
            ..::.||                                  |::|:|...|.||........|.|
plant   118 KSDTVVS----------------------------------EWNLICQHKFLVAVPSTLFFIGSL 148

  Fly   182 IG-GVAATKLMRVLSPRQIYRTGIWCLLMCSLLMGLVKDFSLHCGLRCLAAV------------- 232
            .| ||..            |....|        .|..|...|.|.|..:.|.             
plant   149 FGSGVYG------------YLADSW--------FGRKKTLLLSCVLTFVTAFAISFSPNVWVYAF 193

  Fly   233 -------------SCCFMITSGQYIFGDITAGKYR--VGTLILYDCFWALGLILLPGLA-SNAPS 281
                         |||.::.:      :|...|:|  ||....:  |:.||.:.||.:| ....|
plant   194 LRFANGFFRSGIGSCCIVLAT------EIVGKKWRGQVGQYGFF--FFTLGFLSLPLMAYLERKS 250

  Fly   282 WQHIYLGVT-LSLLVIVFLLPWTPDSPRWQL--QHTKEAQLAIERTVGILLEAARTNGRMHKVSK 343
            |:::|..:: |.|...|.|||:..:||||.|  ...|||.:       :|.:.||.||      |
plant   251 WRNLYRIISFLPLGYAVCLLPFAYESPRWLLVKGRNKEAMV-------VLKKLARLNG------K 302

  Fly   344 ELPQQLEELRERMLEPMP---------AVHWMHLWMGQR-----------------------RST 376
            :||..|.     :::|:|         ...|...|..:|                       ...
plant   303 QLPADLS-----LVDPIPERDDQTSSSEKFWKTKWAVKRIIMVMMAGFGSGFVYYGIQLNAENLN 362

  Fly   377 FHL---VAVHMALATFMVVNTG-LLLHVRSFGREHLVSNTLAM-GLAEMLGCFLALHLTFN-LSE 435
            |:|   |||: ||..|..|..| .||.|  ..|..|.||:..: |.|.:|...|::|.... :|.
plant   363 FNLYLTVAVN-ALMEFPAVFIGSFLLGV--MNRRPLFSNSSYLAGFACLLCAVLSIHRVIRAISV 424

  Fly   436 RKWQWAGGFAIVVGCIGSICWFLAEEDMPEVYGLTLGLLMASLPQAAVACAQSMILACLGELVPM 500
            .||     ..:.|..:|    |:|.....:|                      :.:.|: ||.|.
plant   425 AKW-----LQLAVEAVG----FMASSTAYDV----------------------LYVYCV-ELFPT 457

  Fly   501 EQRSCLSFSAVTWAR-VWQLSAS---FLTLLRQVSPALSLSAFCLLVILGGLGTCCLVTRDKEQP 561
            ..|:    :||:..| .:.|.||   .|..|.:.|..:|...|.:..:|.|:.:..|  |:....
plant   458 NVRN----TAVSLLRQAFMLGASAAPLLVALGRESAMMSFIVFGVASVLSGIVSLWL--RETRNA 516

  Fly   562 PV 563
            |:
plant   517 PL 518

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4465NP_650847.1 2A0119 67..553 CDD:273328 129/585 (22%)
MFS 169..>303 CDD:119392 38/164 (23%)
OCT1NP_565059.2 MFS_OCT_plant 102..511 CDD:340936 121/540 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24064
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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