DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4465 and LOC685081

DIOPT Version :9

Sequence 1:NP_650847.1 Gene:CG4465 / 42374 FlyBaseID:FBgn0038750 Length:577 Species:Drosophila melanogaster
Sequence 2:XP_008764922.2 Gene:LOC685081 / 685081 RGDID:1583222 Length:621 Species:Rattus norvegicus


Alignment Length:559 Identity:126/559 - (22%)
Similarity:216/559 - (38%) Gaps:128/559 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    66 MGNFGPWQLRSLLILFLCKIPAAWFMACILFTAPDLYPEEEYKC--------------------- 109
            :|:|||:|:|..:::.:....:|:|:...:|...|    |.:.|                     
  Rat    11 VGDFGPFQVRVTILMGIPNFLSAFFVFSQVFMVLD----EAHHCSVSWVKNHTFNLSAAEQLAVS 71

  Fly   110 ---DTTA-------FGPDVNSTV---SLDHCYVMVNYGESAYAMRQCRKFLYTTGFHSLTMEFDL 161
               ||..       |.|..:|..   .|.|.:......:|.:...:.|.       .||..||||
  Rat    72 IPNDTAGRPESCLMFRPPPDSASLEDILSHRFNETQACDSGWDYPENRP-------PSLKNEFDL 129

  Fly   162 VCLCDFFVAWSQYWHLFGLLIG-----------GVAATKLMRVLSPRQIYRTGIWCLLMCSLLMG 215
            ||..:.....||...:.|||:|           |..|:.|::||      .:||     ..:...
  Rat   130 VCERENLKRTSQSVFMAGLLVGALVFGPVCDWIGRRASILLQVL------LSGI-----TGVATA 183

  Fly   216 LVKDFSLHCGLRCLAAVSCCFMITSGQYIFGDITAGKYRVGTLILYDCFWALGLILLPGLASNAP 280
            .|..|.|:..|...:|::....:.|...:..:.....:|...::|....:||||:.|.|||....
  Rat   184 FVPSFELYMVLCFFSAIAVAGYMMSTMILVSEWVGPSWRTRAMVLAQSNFALGLMALAGLAYGVR 248

  Fly   281 SWQHIYLGVTLSLLVIVFLLPWTPDSPRWQLQ--HTKEAQLAIERTVGILLEAARTNGRMHKVSK 343
            :|:.:.:..|..:.::||.....|:||||.|.  .|:||:..:::       ||..|||  .::.
  Rat   249 NWRLLQIIGTTPIFLLVFYFWVLPESPRWLLSQGRTEEAKQLVQK-------AALVNGR--PLAS 304

  Fly   344 ELPQQLEELRERMLEPMPAVHWMHLWMGQ--RRSTFHLVAV-------HMALATFMVVNTGLLLH 399
            ||..||...:..     |:.:.:.|:...  |:.|..|:||       :..|. |.|.:.||.::
  Rat   305 ELLNQLVPEKTG-----PSGNALDLFRHPQLRKVTLILIAVWFVDSLLYYGLG-FQVGDFGLDIY 363

  Fly   400 VRS--FGREHLVSNTLAMGLAEMLGCFLALHLTFNLSERKWQ------WAGGFAIVVGCIGSICW 456
            :..  ||...:.:...::.:.|.||             |||.      .||...:::        
  Rat   364 LTQVIFGVVEVPARLSSIPMMEKLG-------------RKWSQLCTLTLAGVMCVII-------- 407

  Fly   457 FLAEEDMPEVYGLTLGLLMASLPQAAVACAQSMILACLGELVPMEQRSCLSFSAVTWARVWQLSA 521
            .....|:|     |:...:|.:.:.|.:.|.::......||:|...|.........::||..:..
  Rat   408 IFIPGDLP-----TVATALAVVGKFASSAAFTISYVYTAELLPTIIRQTGMGLVSIFSRVGGIIT 467

  Fly   522 SFLTLLRQVSPALSLSAFCLLVILGGLGTCCLVTRDKEQ 560
            ..:.||.|...|:.:..|..|.|..|| .|.|:...:.|
  Rat   468 PLVMLLEQYHKAIPMLIFGSLPIGAGL-LCALLPETRGQ 505

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4465NP_650847.1 2A0119 67..553 CDD:273328 124/549 (23%)
MFS 169..>303 CDD:119392 33/144 (23%)
LOC685081XP_008764922.2 2A0119 12..510 CDD:273328 126/558 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166347047
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D704438at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.850

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