DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4465 and Slc22a23

DIOPT Version :9

Sequence 1:NP_650847.1 Gene:CG4465 / 42374 FlyBaseID:FBgn0038750 Length:577 Species:Drosophila melanogaster
Sequence 2:NP_072146.1 Gene:Slc22a23 / 64559 RGDID:620302 Length:689 Species:Rattus norvegicus


Alignment Length:631 Identity:134/631 - (21%)
Similarity:216/631 - (34%) Gaps:221/631 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 PLDLGHMA---HSFTCTDPKANEVSPQTPHPKANNLADDNDDDVITHIMGNFGPWQLRSLLIL-- 80
            ||...|.:   ||..|....|..:           |..|.|..|:..:.|..|.:| ::|::|  
  Rat    52 PLPALHPSGGPHSSCCAAAAAPSL-----------LLLDYDGSVLPFLGGLGGGYQ-KTLVVLTW 104

  Fly    81 --------------FLCKIPAAWFM----------ACIL--------FTAPDLYPEEEYKCDTTA 113
                          ||...|..|..          |.:.        :|:|...|     ..|.:
  Rat   105 IPALFIGFSQFSDSFLLDQPNFWCHGAGKGTELAGATVTGRWGDMGNWTSPSATP-----FSTAS 164

  Fly   114 FGPDVNSTVSLD---------------HCYVMVNYGESAYAMRQCRKFLY--TTGF-HSLTMEFD 160
            :|...|.:.|.|               :|              :|..:.|  .||. .::..::|
  Rat   165 WGTTSNRSNSSDTPPLPSPPGKGNNDSNC--------------ECHAWDYGIRTGLVQNVVSKWD 215

  Fly   161 LVCLCDFFVAWSQYWHLFGLLIG--------GVAATKLMRVLSPRQIYRTGIWCLLMCSLLMGLV 217
            |||    ..||..:...|.||:|        |..|..:.|    |.:....:..:|:..|.:.|.
  Rat   216 LVC----DNAWKVHVAKFSLLVGLIFGYLITGCIADWVGR----RPVLLFSVIFILIFGLTVALS 272

  Fly   218 KDFSLHCGLR-----CLAAVSCCFMITSGQYIFGDITAGKYRVGTLILYDCFWAL-GLILLPGLA 276
            .:.::...||     |||.:    ::|...........||..:.|::.  .|.|: |..|:||||
  Rat   273 VNVTMFSTLRFFEGFCLAGI----ILTLYALRIELCPPGKRFIITMVA--SFVAMAGQFLMPGLA 331

  Fly   277 SNAPSWQHIYLGVTLSLLVIVFLLP---WT--PDSPRWQLQHTKEAQLAIERTVGILLEAARTN- 335
            :....||     |..:|::..|||.   |:  |:|.|| |..|::    .|....::|...:.| 
  Rat   332 ALCRDWQ-----VLQALIICPFLLMLLYWSIFPESLRW-LMATQQ----FESAKKLILYLTQKNC 386

  Fly   336 --------GRMHKVSKELPQQLEELRERMLEPMPAVHWMHLW----------------------- 369
                    |.|.::.|||.:     |.:.:..:..|...:||                       
  Rat   387 VSPESDIKGVMPELEKELSR-----RPKKVCIVKVVGTRNLWKNIVVLCVNSLTGYGIHHCFARS 446

  Fly   370 -MGQRRS------------TFHLVAVHMALATFMVV-----NTGLLLHVRSFGREHLVSNTLAMG 416
             ||....            |...:|:...||..:||     ..||||    |.....:::.|.:|
  Rat   447 MMGHEVKVPLLENFYADYYTMASIALASCLAMCLVVRFLGRRGGLLL----FMILTALASLLQLG 507

  Fly   417 LAEMLGCF-------LALHLTFNLSER-KWQWAGGFAIV----VGCIGSICWFLAEEDMPEVYGL 469
            |..::|.:       |.|.|...:|:. |.:::..|:||    ...:||:..|...|..|.|...
  Rat   508 LLNLIGKYSQHPDSELQLKLAVGMSDSVKDKFSIAFSIVGMFASHAVGSLSVFFCAEITPTVIRC 572

  Fly   470 -TLGLLMAS--------------------LPQAAVACAQSMILACL 494
             .|||::||                    |.....||...:.:.|:
  Rat   573 GGLGLVLASAGFGMLTAPIIELHNQKGYFLHHIIFACCTLICIICI 618

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4465NP_650847.1 2A0119 67..553 CDD:273328 123/582 (21%)
MFS 169..>303 CDD:119392 37/150 (25%)
Slc22a23NP_072146.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..55 2/2 (100%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 162..188 5/25 (20%)
MFS_SLC22A23 187..608 CDD:341002 102/467 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166346857
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.930

Return to query results.
Submit another query.