DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4465 and Svopl

DIOPT Version :9

Sequence 1:NP_650847.1 Gene:CG4465 / 42374 FlyBaseID:FBgn0038750 Length:577 Species:Drosophila melanogaster
Sequence 2:XP_008761085.2 Gene:Svopl / 500085 RGDID:1566053 Length:446 Species:Rattus norvegicus


Alignment Length:465 Identity:98/465 - (21%)
Similarity:176/465 - (37%) Gaps:121/465 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   157 MEFDLVCL------CDFFVAWS-QYWHL--------FGLLIGGVAATKLMRVLSPRQIYRTGIWC 206
            ||..|:.:      |:    |. :.|.:        ||.::..:    |..:|:.|.    |.|.
  Rat    15 MEIMLIAVVSPVIRCE----WQLENWQVAFVTTMVFFGYMVSSI----LFGLLADRY----GRWK 67

  Fly   207 LLMCSLLMG----LVKDFS------------LHCGLRCLAAVSCCFMITSGQYIFGDITAGKYRV 255
            :|:.|.|.|    |:..||            :.||:...|         .|..|..:....|||.
  Rat    68 ILLLSFLWGAYFSLLTSFSPSYIWFVFLRTMVGCGVSGHA---------QGLIIKTEFLPTKYRG 123

  Fly   256 GTLILYDCFWALGLILLPGLASNA-PS--WQHIYLGVTLSLLVIVFLLPWTPDSPRWQLQHTKEA 317
            ..|.|...||..|.:|:..:||.. |:  |:.:....::..::::....:.|:|.|:.:. |...
  Rat   124 YMLPLSQVFWLAGSLLIISMASVVIPTIGWRWLIRIASIPGIILIMAFKFIPESARFNVS-TGNT 187

  Fly   318 QLAIERTVGILLEAARTNGRMHKVSKELPQQLEELRERMLEPMPAVH-------WMHLWMGQRRS 375
            |.|::     .||:.....|.......|.:.:.|.|.|..:.:.:.:       |: :|:|...:
  Rat   188 QAALD-----TLESIAKMNRSVMPEGRLVEPILEKRGRFADLLESKYLRTTLQIWI-IWLGISFA 246

  Fly   376 TFHLVAVHMALATFMVVNTGLLLHVRSFGREHLVSNTLAMGLAE--MLGCF-------------- 424
            .:.::     ||:..::...|:...:|.....:|.|   ||.||  ...|:              
  Rat   247 YYGVI-----LASAELLERDLVCGSKSESEPEVVEN---MGDAEEGRSPCYCHMFAPSDYRTMII 303

  Fly   425 -----LALH----LTFNLSERKWQWAGGFAIVVGCIGSICWFLAEEDMPEVYGLTLGLLMASLPQ 480
                 :||:    |..|...|:.    ..:|.:||  :..:||.........|| :|.|.  :.:
  Rat   304 STLGEIALNPLNILGINFLGRRL----SLSITMGC--TALFFLLLNICTSSAGL-IGFLF--MLR 359

  Fly   481 AAVACAQSMILACLGELVPMEQRSCLSFSAVTWARVWQLSASFLTLLRQVSPALS-LSAFCLLVI 544
            |.||...:.|.....|:.|...|:....::.:..|:..:.|.|::   ||..:.| |.|.||   
  Rat   360 ALVAANFNTIYIYTAEVYPTPMRALGMGTSGSLCRIGAMVAPFIS---QVLMSASFLGALCL--- 418

  Fly   545 LGGLGTCCLV 554
               ..:.|:|
  Rat   419 ---FSSVCVV 425

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4465NP_650847.1 2A0119 67..553 CDD:273328 96/462 (21%)
MFS 169..>303 CDD:119392 34/161 (21%)
SvoplXP_008761085.2 MFS_SVOPL 3..434 CDD:341000 98/465 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166347061
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.930

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