DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4465 and CG6356

DIOPT Version :9

Sequence 1:NP_650847.1 Gene:CG4465 / 42374 FlyBaseID:FBgn0038750 Length:577 Species:Drosophila melanogaster
Sequence 2:NP_651240.1 Gene:CG6356 / 42893 FlyBaseID:FBgn0039178 Length:570 Species:Drosophila melanogaster


Alignment Length:645 Identity:121/645 - (18%)
Similarity:209/645 - (32%) Gaps:242/645 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 VSPQTPHPKANN--LADDNDDDVIT---HIMGNFGP--WQLRSLLILFLCKIPAAWFMACIL--- 95
            ::..|.:|:.|.  :::::..|::|   .::|:.|.  |     .|.|||..|.      ||   
  Fly     1 MTQSTENPEKNRELISEESMKDLLTKQLEVVGSGGAFVW-----AIFFLCVTPN------ILNGF 54

  Fly    96 ----FTAPDLYPEEEY---------------KCDTTAFGPDVNSTVSLDHCYVMVNYGE------ 135
                :|.....|::::               |.:..|.|.|.......|.     |||.      
  Fly    55 HVSSYTLLGHLPDDQWCGIPELQDTNWTHAQKREIVAKGLDSGGCTVWDW-----NYGHLAKMSY 114

  Fly   136 -------------SAYAMRQCRKFLYTTGFH-------SLTMEFDLVCLCDFFVAWSQYWHLFGL 180
                         |..|...||    ..|.|       :...::||.|                 
  Fly   115 EAALNYTGHLTQISPPAEVSCR----VKGQHEFAHPETTFVADWDLTC----------------- 158

  Fly   181 LIGGVAATKLMRVLSPRQIYRT--------GIWCLLMCSLLMGLVKD-------FSLHCGLRCLA 230
                           .|.|.||        |.:|   .|...|::.|       |:|......:.
  Fly   159 ---------------DRSIQRTSAQVSISLGKFC---GSFSFGILADKFGRKSSFTLGAAFFIVG 205

  Fly   231 AVSCCF-----MITSGQYIFGDITAG---------------KYRVGTLILYDCFWALGLILLPGL 275
            :..|.|     :..:|::..|..::|               |:|....|.:...:.:|:|:|..:
  Fly   206 SFFCTFSPWYSLFLAGRFALGAASSGLFYPAFTMIVENICLKHRSWMSIAFSASYPVGMIILAIV 270

  Fly   276 ASNAPSWQHIYLGVTLSLLVIVFLLPWTPDSPRWQLQHTKEAQLAIERTVGILLEAARTNGRMHK 340
            ......|:|:.|.:|:..|:::.......:||||.:                      ||.|..:
  Fly   271 GYVIQPWRHLQLALTIPSLLLILNCYLMSESPRWLI----------------------TNQRYDR 313

  Fly   341 VSKEL---------------PQQLEELRERMLEPMPAVHW-MHLWMGQRRSTFHLVA----VHMA 385
            |.|.|               |.|:.. .::.|||.....: ..|..|..:|...|.|    ..|.
  Fly   314 VYKILFRQPSHYQIQPAVAAPSQVAS-DKKSLEPEEGFSFGQKLKNGPLKSIIELYANSKVRRMI 377

  Fly   386 LAT-FMVVNTGLLLHVRSFGREHL-VSNTL---AMGLAEMLGCFLALHLTFNLSERK------WQ 439
            .|: ||...|.|..:|.:....:| ||..|   ..||.: :..:|...:....:.|:      :.
  Fly   378 FASYFMFCVTSLSYYVTALNAANLSVSRYLYIIGTGLVD-IPSYLVPVIMLRFTGRRLTTMFLFL 441

  Fly   440 WAGGFAIVVGCI--GSICWFLAEEDMPEVYGLTLGLLMASLPQAAVACAQSMILACLGELVPMEQ 502
            |.|...::|..:  ||..|.:|               .|.|.:..::...|::.....||.|.:.
  Fly   442 WTGVSLLLVLAVPAGSTTWIVA---------------FAMLGRFGISATYSVVTLYTAELYPTQI 491

  Fly   503 RSCLSFSAVTWARVWQLSASFLTLLRQVSPALSLSAFCLLVILGGLG--------TCCLV 554
            |:....:..|:|.|..:||.:                 ::.:||.||        .||::
  Fly   492 RNSALGTCSTFAHVGSISAPY-----------------VVDVLGALGWYIPTTICGCCVL 534

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4465NP_650847.1 2A0119 67..553 CDD:273328 115/611 (19%)
MFS 169..>303 CDD:119392 27/168 (16%)
CG6356NP_651240.1 MFS 167..544 CDD:119392 83/427 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45458321
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D704438at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24064
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.950

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