DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4465 and slc22a4

DIOPT Version :9

Sequence 1:NP_650847.1 Gene:CG4465 / 42374 FlyBaseID:FBgn0038750 Length:577 Species:Drosophila melanogaster
Sequence 2:NP_957143.1 Gene:slc22a4 / 393822 ZFINID:ZDB-GENE-040426-1517 Length:553 Species:Danio rerio


Alignment Length:621 Identity:129/621 - (20%)
Similarity:220/621 - (35%) Gaps:180/621 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    58 DDDVITHIMGNFGPWQLRSLLILFLCKIPAAWFMACILFTAPD-----LYPEE------------ 105
            |.|.||..:|.:||:||...|.|.:..:|..:....|:|....     |.||:            
Zfish     3 DYDDITSFLGTWGPFQLTVFLALAISILPNGFVGLYIVFVGDTPAHECLIPEQINISSVWRDAAI 67

  Fly   106 ---------------EYKCDTTA------FGPDVN---STVSLDHCYVMVNYGESAYAMRQCRKF 146
                           .|:.||..      :.|:|.   |.:..:.|....:|.:..|.       
Zfish    68 PTQMQDGVLKRSSCSRYRLDTLRQLSMLNYTPNVEVNLSQIETEPCVDGWSYSQEFYQ------- 125

  Fly   147 LYTTGFHSLTMEFDLVCLCDFFVAWSQYWHLFGLLIGGVAATKLMRVLSPRQIYRTGIWCLLMCS 211
                  .::..|:||||..::....:...:..|:|:|    |.|...:|.|...|..::.::...
Zfish   126 ------STIVTEWDLVCEREYKGPLTSSIYFCGVLVG----TFLSGQMSDRYGRRPVLFTMMALQ 180

  Fly   212 LLMGLVKDFSLHCGLRCLAAVSCCFMITSGQYIFGDITAGK-----YRVGTLILYDC----FWAL 267
            .:..|::.|            |..:.:.|..|.|...:...     |.:|:.||...    |.:|
Zfish   181 TITILIQMF------------SPSWEVFSAIYFFVGFSGFSNYVVAYVLGSEILSPASRVLFGSL 233

  Fly   268 GLILLPGL--------ASNAPSWQHIYLGVTLSLLVIVFLLPW-TPDSPRWQLQ--HTKEAQLAI 321
            |:.:..|:        |....||:.:.|...|:.| :.|.|.| .|:||||.|.  .|.||:..:
Zfish   234 GVFMGSGIGQMFFPLAAYFIRSWRWLVLTNALTGL-LYFPLWWFIPESPRWLLSQGRTAEAEAVL 297

  Fly   322 ERTVGILLEAARTNGRMHKVSKEL---PQQLEELRERMLEPMPAVHWMHLWMGQRRSTFHLVAVH 383
            .|       ||..|   ...:.|:   ..::||..::.:              |:.|...:::..
Zfish   298 RR-------AAEKN---RVTAPEVIFSSSEIEEAAKKRI--------------QKHSILDILSNC 338

  Fly   384 MALATFMVVNTGLLLHVRSFGREHLVSNTLAMGLAEMLGCFL------------ALHLTFNLSER 436
            .|::|.::.:  ||..|.:.....|:.||..:.....|..||            ||.|.| .|.|
Zfish   339 NAVSTILICS--LLWMVITMSYYALILNTTNLHGNPYLNFFLSAVVEVPAYIIAALLLRF-CSRR 400

  Fly   437 KWQWA----GGFAIVVGCIGSICWFLAEEDMPEVYGLTLGLLMASLPQAAVACAQSMILACLGEL 497
            ..|.:    ||..|          |:.:....|:.||...|.|  |.:..|..|..::.|...||
Zfish   401 ICQASTLLLGGALI----------FIIQLIPTELQGLATALEM--LGKLCVTAAFCVVYAVTSEL 453

  Fly   498 VPMEQRSCLSFSAVTWARVWQLSASFLTLLRQVSPALSLSAFCLLVILGGL----GTCCLVTRDK 558
            .|...|:....|....||:..:.:.|:..|.      :...:...:::|||    |...|:..:.
Zfish   454 FPTVVRNMAMGSCSMTARIGSIISPFIIYLG------NYYRYIPYIVIGGLALFSGVMSLLLPES 512

  Fly   559 E---------------------QPPVGAVVNKGQQL 573
            :                     :||..:..:|.:.|
Zfish   513 KGKVLPETIAQMQSVRGLRRCRKPPAASTEDKSKVL 548

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4465NP_650847.1 2A0119 67..553 CDD:273328 120/569 (21%)
MFS 169..>303 CDD:119392 31/151 (21%)
slc22a4NP_957143.1 2A0119 12..520 CDD:273328 121/582 (21%)
MFS 144..510 CDD:119392 94/427 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170588460
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.840

Return to query results.
Submit another query.