DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4465 and Slc22a12

DIOPT Version :9

Sequence 1:NP_650847.1 Gene:CG4465 / 42374 FlyBaseID:FBgn0038750 Length:577 Species:Drosophila melanogaster
Sequence 2:XP_038941497.1 Gene:Slc22a12 / 365398 RGDID:621628 Length:578 Species:Rattus norvegicus


Alignment Length:565 Identity:126/565 - (22%)
Similarity:192/565 - (33%) Gaps:181/565 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 SPQTPHPKANNLADDNDDDVITHIMGNFGPWQLRSLLILFLCKIPAAWFMACILFTAPDLYPEEE 106
            |...||.:......||.....: |.|:||    |.  :|....||          ..||..|   
  Rat    41 SAAVPHHRCWVPLLDNSTSQAS-IPGDFG----RD--VLLAVSIP----------PGPDQRP--- 85

  Fly   107 YKC-------------DTTAFGPDVNSTVSLDHCYVMVNYGESAYAMRQCRKFLYTTGFHSLTME 158
            ::|             :|||.......|...:..:|   |..|.:     |..:.||        
  Rat    86 HQCLRFRQPQWQLIESNTTATNWSDADTEPCEDGWV---YDHSTF-----RSTIVTT-------- 134

  Fly   159 FDLVCLCDFFVAWSQYWHLFGLLIG----GVAATKL--MRVLSPRQIYRTGIWCLLMCSL---LM 214
            :||||........:|...|.|:|:|    |.|:.:.  .|||:         |..|:.|:   :.
  Rat   135 WDLVCDSQALRPMAQSIFLAGILVGAAVCGHASDRFGRRRVLT---------WSYLLVSVSGTIA 190

  Fly   215 GLVKDFSLHCGLRCL--AAVSCCFMITSGQYIFGDITAGKYRVG---------TLILYDCFW--- 265
            .|:..|.|:|..|.|  :||:...|.|:...:| .:..|  |.|         :|:|....|   
  Rat   191 ALMPTFPLYCLFRFLVASAVAGVMMNTASLCMF-PVVLG--REGYMQDPELTPSLLLAVMEWTSA 252

  Fly   266 --------------ALGLILLPGLASNAPSWQHIYLGVTLSLLVIVFLLPWTPDSPRWQLQHTKE 316
                          :.|.:|...:|....||:.:.|.|:....:......|.|:|.||.:     
  Rat   253 QAGPLMMTLNALGFSFGQVLTGSVAYGVRSWRMLQLAVSAPFFLFFVYSWWLPESARWLI----- 312

  Fly   317 AQLAIERTVGILLEAARTNGRMHKVSKELPQ----QLEELRERMLEPMPAVHWMHLWMGQRRSTF 377
                   |||.|.::.|...|:..|::...:    .:|.||..|.|..         .|.:..  
  Rat   313 -------TVGRLDQSLRELQRVAAVNRRKAEADTLTVEVLRSAMQEEP---------NGNQAG-- 359

  Fly   378 HLVAVHMALATFMVVNTGLLLHVRSFGREHLVSNTLAMGLAEMLGCFLALHLTFNLSERKWQWAG 442
                          ...|.|||.........:|         || |:.|...||.          
  Rat   360 --------------ARLGTLLHTPGLRLRTFIS---------ML-CWFAFGFTFY---------- 390

  Fly   443 GFAIVVGCIGSICWFLAE----EDMPEVYGLTLGLLMASLPQAAVACAQSMIL--ACL--GELVP 499
            |.|:.:..:||..:.|..    .|:|...|   .||:.|.....:..|.|::|  .|:  ..|||
  Rat   391 GLALDLQALGSNIFLLQALIGIVDLPVKMG---SLLLLSRLGRRLCQASSLVLPGLCILANILVP 452

  Fly   500 MEQ---RSCLSF-------SAVTWARVWQLSASFLTLLRQVSPAL 534
            .|.   ||.|:.       :|.|...::. |..|.|::|..:..|
  Rat   453 REMGILRSSLAVLGLGSLGAAFTCVTIFS-SELFPTVIRMTAVGL 496

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4465NP_650847.1 2A0119 67..553 CDD:273328 120/540 (22%)
MFS 169..>303 CDD:119392 37/170 (22%)
Slc22a12XP_038941497.1 MFS_OAT 109..541 CDD:340932 106/477 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166346825
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.930

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