DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4465 and CarT

DIOPT Version :9

Sequence 1:NP_650847.1 Gene:CG4465 / 42374 FlyBaseID:FBgn0038750 Length:577 Species:Drosophila melanogaster
Sequence 2:NP_610052.1 Gene:CarT / 35334 FlyBaseID:FBgn0032879 Length:674 Species:Drosophila melanogaster


Alignment Length:558 Identity:127/558 - (22%)
Similarity:221/558 - (39%) Gaps:85/558 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    44 QTPHPKANNLADDNDD-DVITHIMGNFGPWQLRSLLILFLCKIPAAWFMACI---------LFTA 98
            |...|::....|:..| |.:...:|.||.:|  .||:..:| :|     |||         ||.|
  Fly    20 QRHKPESQPSVDEAFDLDDLLPTIGEFGKYQ--KLLVFGIC-LP-----ACIPCGFCAFNQLFMA 76

  Fly    99 --PDLY----------PEEEYKCDTTAFGPDVNSTVSLDHCYVM-VNY------GE--------- 135
              ||.|          |.|:.|..:.....| |..:....||.. ||:      ||         
  Fly    77 DTPDDYWCRIPELLDLPLEQRKSLSIPKELD-NDELVYSKCYTYGVNWTQLLESGEEDDLTTMEP 140

  Fly   136 -SAYAMRQC-RKFLYTTG--FHSLTMEFDLVCLCDFFVAWSQYWHLFGLLIGGVAATKLMRVLSP 196
             :::.:.:| :.:.|.|.  :.|:.::|||||..|.:....    |..|..||.....|..:|:.
  Fly   141 NASWPLIKCPQGWEYNTSVVWSSIVIDFDLVCDQDIYPTIG----LAALNTGGPVGVYLFGLLND 201

  Fly   197 RQIYRTGIW-C---LLMCSLLMGLVKDFSLHCGLRCLAAVSCCFMITSGQYIFGDITAGKYRVGT 257
            |...|...: |   ||..||:..|.|||....|.|.:..::...:......|..::....||...
  Fly   202 RGGRRLSYFVCLATLLAGSLMTSLSKDFWTWAGSRVIVGLTIPAVYQIPFIISLELVGENYRSFV 266

  Fly   258 LILYDCFWALGLILLPGLASNAPSWQHIYLGVTLSLLVIVFLLPWTPDSPRWQLQHTKEAQLAIE 322
            .::...|:..|::||.|:......|..:....:|........:...|:||||.|...:     :|
  Fly   267 TVMTCTFYTSGIMLLSGVTYLERDWVRLSYITSLPFYAYFLYMFVMPESPRWLLMRGR-----LE 326

  Fly   323 RTVGILLEAARTNGRMHKVSKELPQQLEELRERMLEPMPAVHWMHLWMGQRRSTFHLVAVHMALA 387
            ..:.||...|:.|||....:..|..:.:..|:::.:....:..:.|....|.....|..:.:.|:
  Fly   327 EALKILERMAKVNGREFPEAVHLKLEAQIRRDKLKKQKKKMANVGLADLCRTPNMRLKTILITLS 391

  Fly   388 TFM--VVNTGLLLHVRSFGREHLVSNTLA--MGLAEMLGCFLALHLTFNLSERKW--QWAGGFAI 446
            .|.  .|..||..:..:.|....||..|:  :.|...|.|:..:.        .|  :|....::
  Fly   392 WFANETVYLGLSYYGPALGTNQYVSFFLSAVVELPSYLCCWYFMD--------TWGRRWPLSLSM 448

  Fly   447 VVGCIGSICWFLAEEDMPEVYGLTLGLLMASLPQAAVACAQSMILACLGELVPMEQRSCLSFSAV 511
            ::|.:..:...:..:|..:.   ||.|.:.|  :|.::.:..:|....|||.|.:.|. :...|.
  Fly   449 ILGGVACVITVMLPDDAVDE---TLVLYLVS--KALLSASFLIIYPFAGELYPTQVRG-IGIGAS 507

  Fly   512 TW-ARVWQLSASFLTLLRQVSPALSLSAFCLLVILGGL 548
            :: ..:..:...|:|.|.:.:..|.|.....|.:|||:
  Fly   508 SYIGGLGLIGIPFITYLGKDNLKLPLVIMGFLSMLGGM 545

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4465NP_650847.1 2A0119 67..553 CDD:273328 122/534 (23%)
MFS 169..>303 CDD:119392 29/137 (21%)
CarTNP_610052.1 2A0119 44..561 CDD:273328 122/534 (23%)
MFS 182..551 CDD:119392 84/383 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24064
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.010

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