DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4465 and Svopl

DIOPT Version :9

Sequence 1:NP_650847.1 Gene:CG4465 / 42374 FlyBaseID:FBgn0038750 Length:577 Species:Drosophila melanogaster
Sequence 2:XP_011239688.1 Gene:Svopl / 320590 MGIID:2444335 Length:544 Species:Mus musculus


Alignment Length:527 Identity:105/527 - (19%)
Similarity:192/527 - (36%) Gaps:150/527 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   103 PEEEYKCDTTAFGPDVNSTVSLDHCYVMVNYGESAYAMRQCRKFLY--TTGFHSLTMEFDLVCL- 164
            ||.:.| :|..|        :::.....:.:|....|:     ||.  :||... .||..|:.: 
Mouse    22 PEPQQK-ETKTF--------TVEDAVETIGFGRFHIAL-----FLIMGSTGVVE-AMEIMLIAVV 71

  Fly   165 -----CDFFVAWS-QYWHL--------FGLLIGGVAATKLMRVLSPRQIYRTGIWCLLMCSLLMG 215
                 |:    |. :.|.:        ||.::..:    |..:|:.|.    |.|.:|:.|.|.|
Mouse    72 SPVIRCE----WQLENWQVAFVTTMVFFGYMVSSI----LFGLLADRY----GRWKILLLSFLWG 124

  Fly   216 ----LVKDFS------------LHCGLRCLAAVSCCFMITSGQYIFGDITAGKYRVGTLILYDCF 264
                |:..||            :.||:...|         .|..|..:....|||...|.|...|
Mouse   125 AYFSLLTSFSPSYIWFVFLRTMVGCGVSGHA---------QGLIIKTEFLPTKYRGYMLPLSQVF 180

  Fly   265 WALGLILLPGLASNA-PS--WQHIYLGVTLSLLVIVFLLPWTPDSPRWQLQHTKEAQLAIERTVG 326
            |..|.:|:..:||.. |:  |:.:....::..::::....:.|:|.|:.:. |...|.|:.    
Mouse   181 WLAGSLLIISMASVVIPTIGWRWLIRIASIPGIILIMAFKFIPESARFNVS-TGNTQAALN---- 240

  Fly   327 ILLEAARTNGRMHKVSKELPQQLEELRERMLEPMPAVH-------WMHLWMGQRRSTFHLVAVHM 384
             .||:.....|......:|.:.:.|.|.|..:.:.:.:       |: :|:|...:.:.::    
Mouse   241 -TLESIAKMNRSVMPEGQLVEPILEKRGRFADLLDSKYLRTTLQIWI-IWLGISFAYYGVI---- 299

  Fly   385 ALATFMVVNTGLLLHVRSFGREHLVSNT------------------------------LAMGLAE 419
             ||:..::...|:...:|.....:|..|                              :|:....
Mouse   300 -LASAELLERDLVCGSKSESEPEVVETTGDSGEGLSPCYCHIFAPSDYRTMIISTLGEIALNPLN 363

  Fly   420 MLGC-FLALHLTFNLSERKWQWAGGFAIVVGCIGSICWFLAEEDMPEVYGLTLGLLMASLPQAAV 483
            :||. ||...|:             .:|.:||  :..:||.........|| :|.|.  :.:|.|
Mouse   364 ILGINFLGRRLS-------------LSITMGC--TALFFLLLNICTSSAGL-IGFLF--MLRALV 410

  Fly   484 ACAQSMILACLGELVPMEQRSCLSFSAVTWARVWQLSASFLTLLRQVSPALS-LSAFCLLVILGG 547
            |...:.|.....|:.|...|:....::.:..|:..:.|.|::   ||..:.| |.|.||      
Mouse   411 AANFNTIYIYTAEVYPTPMRAIGMGTSGSLCRIGAMVAPFIS---QVLMSASFLGALCL------ 466

  Fly   548 LGTCCLV 554
            ..:.|:|
Mouse   467 FSSVCVV 473

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4465NP_650847.1 2A0119 67..553 CDD:273328 103/524 (20%)
MFS 169..>303 CDD:119392 34/161 (21%)
SvoplXP_011239688.1 MFS_SVOPL 49..482 CDD:341000 99/491 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167843583
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.930

Return to query results.
Submit another query.